RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 CTR9Q6PD62 1173 aa13.06□□□□□ -0.32
PKP4-215ENST00000494945 RALYLQ86SE5 291 aaKnown RBP13.06□□□□□ -0.32
PKP4-215ENST00000494945 TBC1D10CQ8IV04 446 aa13.06□□□□□ -0.32
PKP4-215ENST00000494945 AMOTL1Q8IY63 956 aa13.06□□□□□ -0.32
PKP4-215ENST00000494945 STAG1Q8WVM7 1258 aa13.06□□□□□ -0.32
PKP4-215ENST00000494945 RNF41Q9H4P4 317 aaPredicted RBP13.06□□□□□ -0.32
PKP4-215ENST00000494945 MKRN1Q9UHC7 482 aaKnown RBP13.06□□□□□ -0.32
PKP4-215ENST00000494945 HDAC9Q9UKV0 1011 aa13.06□□□□□ -0.32
PKP4-215ENST00000494945 ATAD5Q96QE3 1844 aa13.06□□□□□ -0.32
PKP4-215ENST00000494945 ROBO3Q96MS0 1386 aa13.06□□□□□ -0.32
PKP4-215ENST00000494945 MINDY4BA8MYZ0 360 aa13.05□□□□□ -0.32
PKP4-215ENST00000494945 USP17L12C9JPN9 530 aa13.05□□□□□ -0.32
PKP4-215ENST00000494945 USP17L21D6R901 530 aa13.05□□□□□ -0.32
PKP4-215ENST00000494945 FZD9O00144 591 aa13.05□□□□□ -0.32
PKP4-215ENST00000494945 SLC3A2P08195 630 aaKnown RBP13.05□□□□□ -0.32
PKP4-215ENST00000494945 LMNB1P20700 586 aa13.05□□□□□ -0.32
PKP4-215ENST00000494945 MCM5P33992 734 aa13.05□□□□□ -0.32
PKP4-215ENST00000494945 SLC4A3P48751 1232 aa13.05□□□□□ -0.32
PKP4-215ENST00000494945 NT5C2P49902 561 aa13.05□□□□□ -0.32
PKP4-215ENST00000494945 AK2P54819 239 aa13.05□□□□□ -0.32
PKP4-215ENST00000494945 EIF6P56537 245 aaKnown RBP13.05□□□□□ -0.32
PKP4-215ENST00000494945 APOBEC3HQ6NTF7 200 aaKnown RBP13.05□□□□□ -0.32
PKP4-215ENST00000494945 MFSD6Q6ZSS7 791 aa13.05□□□□□ -0.32
PKP4-215ENST00000494945 ARHGAP27Q6ZUM4 889 aa13.05□□□□□ -0.32
PKP4-215ENST00000494945 MB21D2Q8IYB1 491 aaPredicted RBP13.05□□□□□ -0.32
PKP4-215ENST00000494945 TGFBRAP1Q8WUH2 860 aa13.05□□□□□ -0.32
PKP4-215ENST00000494945 KRT23Q9C075 422 aa13.05□□□□□ -0.32
PKP4-215ENST00000494945 MCM9Q9NXL9 1143 aa13.05□□□□□ -0.32
PKP4-215ENST00000494945 FLT1P17948 1338 aa13.05□□□□□ -0.32
PKP4-215ENST00000494945 RPS12P25398 132 aaKnown RBP13.04□□□□□ -0.32
PKP4-215ENST00000494945 PRELPP51888 382 aa13.04□□□□□ -0.32
PKP4-215ENST00000494945 EXOSC10Q01780 885 aaKnown RBP13.04□□□□□ -0.32
PKP4-215ENST00000494945 CTDSPL2Q05D32 466 aa13.04□□□□□ -0.32
PKP4-215ENST00000494945 CDC42EP5Q6NZY7 148 aa13.04□□□□□ -0.32
PKP4-215ENST00000494945 FBXL16Q8N461 479 aa13.04□□□□□ -0.32
PKP4-215ENST00000494945 OGFOD1Q8N543 542 aa13.04□□□□□ -0.32
PKP4-215ENST00000494945 ZSCAN31Q96LW9 406 aaPredicted RBP13.04□□□□□ -0.32
PKP4-215ENST00000494945 USP40Q9NVE5 1235 aa13.04□□□□□ -0.32
PKP4-215ENST00000494945 LIMCH1Q9UPQ0 1083 aa13.04□□□□□ -0.32
PKP4-215ENST00000494945 COL2A1P02458 1487 aaPredicted RBP13.04□□□□□ -0.32
PKP4-215ENST00000494945 NPM3O75607 178 aaKnown RBP13.03□□□□□ -0.32
PKP4-215ENST00000494945 FGRP09769 529 aa13.03□□□□□ -0.32
PKP4-215ENST00000494945 USP17L8P0C7I0 530 aa13.03□□□□□ -0.32
PKP4-215ENST00000494945 RBM5P52756 815 aaKnown RBP eCLIP13.03□□□□□ -0.32
PKP4-215ENST00000494945 CFAP100Q494V2 611 aa13.03□□□□□ -0.32
PKP4-215ENST00000494945 C12orf60Q5U649 245 aa13.03□□□□□ -0.32
PKP4-215ENST00000494945 MAPKAPK5Q8IW41 473 aa13.03□□□□□ -0.32
PKP4-215ENST00000494945 MTMR14Q8NCE2 650 aa13.03□□□□□ -0.32
PKP4-215ENST00000494945 TMX3Q96JJ7 454 aa13.03□□□□□ -0.32
PKP4-215ENST00000494945 MTA3Q9BTC8 594 aa13.03□□□□□ -0.32
PKP4-215ENST00000494945 AGXT2Q9BYV1 514 aa13.03□□□□□ -0.32
PKP4-215ENST00000494945 SCN4AP35499 1836 aa13.03□□□□□ -0.32
PKP4-215ENST00000494945 NEDD4P46934 1319 aa13.03□□□□□ -0.32
PKP4-215ENST00000494945 MYH15Q9Y2K3 1946 aa13.03□□□□□ -0.32
PKP4-215ENST00000494945 B4E1Z4 1266 aa13.02□□□□□ -0.33
PKP4-215ENST00000494945 ORC4O43929 436 aa13.02□□□□□ -0.33
PKP4-215ENST00000494945 WDHD1O75717 1129 aaPredicted RBP13.02□□□□□ -0.33
PKP4-215ENST00000494945 FGD1P98174 961 aa13.02□□□□□ -0.33
PKP4-215ENST00000494945 PDE4BQ07343 736 aa13.02□□□□□ -0.33
PKP4-215ENST00000494945 COL9A3Q14050 684 aaPredicted RBP13.02□□□□□ -0.33
PKP4-215ENST00000494945 TOB2Q14106 344 aaPredicted RBP13.02□□□□□ -0.33
PKP4-215ENST00000494945 Q6ZUG5 572 aa13.02□□□□□ -0.33
PKP4-215ENST00000494945 IDI2Q9BXS1 227 aa13.02□□□□□ -0.33
PKP4-215ENST00000494945 SH2B1Q9NRF2 756 aaPredicted RBP13.02□□□□□ -0.33
PKP4-215ENST00000494945 ZBTB12Q9Y330 459 aaPredicted RBP13.02□□□□□ -0.33
PKP4-215ENST00000494945 GOLGB1Q14789 3259 aaKnown RBP13.01□□□□□ -0.33
PKP4-215ENST00000494945 CYP2D7A0A087X1C5 515 aa13.01□□□□□ -0.33
PKP4-215ENST00000494945 PRC1O43663 620 aa13.01□□□□□ -0.33
PKP4-215ENST00000494945 POLR3DP05423 398 aaPredicted RBP13.01□□□□□ -0.33
PKP4-215ENST00000494945 HSP90AA1P07900 732 aaKnown RBP13.01□□□□□ -0.33
PKP4-215ENST00000494945 YBX3P16989 372 aaKnown RBP eCLIP13.01□□□□□ -0.331e-7■□□□□ 9.8
PKP4-215ENST00000494945 CUL4AQ13619 759 aa13.01□□□□□ -0.33
PKP4-215ENST00000494945 DLGAP5Q15398 846 aa13.01□□□□□ -0.33
PKP4-215ENST00000494945 NOL8Q76FK4 1167 aaKnown RBP13.01□□□□□ -0.33
PKP4-215ENST00000494945 ESR2Q92731 530 aa13.01□□□□□ -0.33
PKP4-215ENST00000494945 DPF2Q92785 391 aa13.01□□□□□ -0.33
PKP4-215ENST00000494945 TMEM87BQ96K49 555 aa13.01□□□□□ -0.33
PKP4-215ENST00000494945 TCEANC2Q96MN5 208 aa13.01□□□□□ -0.33
PKP4-215ENST00000494945 TAOK2Q9UL54 1235 aa13.01□□□□□ -0.33
PKP4-215ENST00000494945 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.01□□□□□ -0.33
PKP4-215ENST00000494945 TACC3Q9Y6A5 838 aa13.01□□□□□ -0.33
PKP4-215ENST00000494945 TCHHQ07283 1943 aa13□□□□□ -0.33
PKP4-215ENST00000494945 SPDYE2BA6NHP3 402 aa13□□□□□ -0.33
PKP4-215ENST00000494945 KDM4AO75164 1064 aa13□□□□□ -0.33
PKP4-215ENST00000494945 SPDYE6P0CI01 402 aa13□□□□□ -0.33
PKP4-215ENST00000494945 CYP2D6P10635 497 aa13□□□□□ -0.33
PKP4-215ENST00000494945 ANTXR2P58335 489 aa13□□□□□ -0.33
PKP4-215ENST00000494945 ZNF280AP59817 542 aaPredicted RBP13□□□□□ -0.33
PKP4-215ENST00000494945 PICALMQ13492 652 aa13□□□□□ -0.33
PKP4-215ENST00000494945 TTC6Q86TZ1 520 aa13□□□□□ -0.33
PKP4-215ENST00000494945 INTS4Q96HW7 963 aaKnown RBP13□□□□□ -0.33
PKP4-215ENST00000494945 PRMT6Q96LA8 375 aaPredicted RBP13□□□□□ -0.33
PKP4-215ENST00000494945 OSBPL5Q9H0X9 879 aaPredicted RBP13□□□□□ -0.33
PKP4-215ENST00000494945 ZNF287Q9HBT7 754 aa13□□□□□ -0.33
PKP4-215ENST00000494945 TOMM22Q9NS69 142 aa13□□□□□ -0.33
PKP4-215ENST00000494945 TMOD2Q9NZR1 351 aa13□□□□□ -0.33
PKP4-215ENST00000494945 ZSWIM5Q9P217 1185 aa13□□□□□ -0.33
PKP4-215ENST00000494945 SAP30BPQ9UHR5 308 aaKnown RBP13□□□□□ -0.33
PKP4-215ENST00000494945 ZNF541Q9H0D2 1346 aa12.99□□□□□ -0.33
PKP4-215ENST00000494945 ENTPD3O75355 529 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms