RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 IFIT3O14879 490 aaKnown RBP19.37■□□□□ 0.69
ATG4B-225ENST00000494465 FGRP09769 529 aa19.37■□□□□ 0.69
ATG4B-225ENST00000494465 L1TD1Q5T7N2 865 aaKnown RBP19.37■□□□□ 0.69
ATG4B-225ENST00000494465 MTA3Q9BTC8 594 aa19.37■□□□□ 0.69
ATG4B-225ENST00000494465 CRNKL1Q9BZJ0 848 aaKnown RBP19.37■□□□□ 0.69
ATG4B-225ENST00000494465 PDE6BP35913 854 aa19.37■□□□□ 0.69
ATG4B-225ENST00000494465 UBE2HP62256 183 aa19.37■□□□□ 0.69
ATG4B-225ENST00000494465 EVX2Q03828 476 aa19.37■□□□□ 0.69
ATG4B-225ENST00000494465 ATP8A2Q9NTI2 1148 aa19.37■□□□□ 0.69
ATG4B-225ENST00000494465 ECM29Q5VYK3 1845 aa19.37■□□□□ 0.69
ATG4B-225ENST00000494465 USP17L12C9JPN9 530 aa19.36■□□□□ 0.69
ATG4B-225ENST00000494465 USP17L21D6R901 530 aa19.36■□□□□ 0.69
ATG4B-225ENST00000494465 XRCC6P12956 609 aaKnown RBP eCLIP19.36■□□□□ 0.69
ATG4B-225ENST00000494465 RXRAP19793 462 aa19.36■□□□□ 0.69
ATG4B-225ENST00000494465 CDC27P30260 824 aa19.36■□□□□ 0.69
ATG4B-225ENST00000494465 METAP2P50579 478 aaKnown RBP eCLIP19.36■□□□□ 0.69
ATG4B-225ENST00000494465 KRT85P78386 507 aa19.36■□□□□ 0.69
ATG4B-225ENST00000494465 EN1Q05925 392 aaPredicted RBP19.36■□□□□ 0.69
ATG4B-225ENST00000494465 TOMM22Q9NS69 142 aa19.36■□□□□ 0.69
ATG4B-225ENST00000494465 FAM217BQ9NTX9 383 aaPredicted RBP19.36■□□□□ 0.69
ATG4B-225ENST00000494465 CDK5RAP2Q96SN8 1893 aa19.36■□□□□ 0.69
ATG4B-225ENST00000494465 NID2Q14112 1375 aa19.36■□□□□ 0.69
ATG4B-225ENST00000494465 ADD1P35611 737 aaKnown RBP19.36■□□□□ 0.69
ATG4B-225ENST00000494465 FOSBP53539 338 aa19.36■□□□□ 0.69
ATG4B-225ENST00000494465 DIXDC1Q155Q3 683 aa19.36■□□□□ 0.69
ATG4B-225ENST00000494465 OLFM4Q6UX06 510 aa19.36■□□□□ 0.69
ATG4B-225ENST00000494465 TTC6Q86TZ1 520 aa19.36■□□□□ 0.69
ATG4B-225ENST00000494465 ZKSCAN3Q9BRR0 538 aa19.36■□□□□ 0.69
ATG4B-225ENST00000494465 ZSCAN16Q9H4T2 348 aaPredicted RBP19.36■□□□□ 0.69
ATG4B-225ENST00000494465 C6orf229H3BNL8 230 aa19.35■□□□□ 0.69
ATG4B-225ENST00000494465 ZBTB43O43298 467 aa19.35■□□□□ 0.69
ATG4B-225ENST00000494465 SLC15A2Q16348 729 aa19.35■□□□□ 0.69
ATG4B-225ENST00000494465 CSPP1Q1MSJ5 1256 aa19.35■□□□□ 0.69
ATG4B-225ENST00000494465 MKRN1Q9UHC7 482 aaKnown RBP19.35■□□□□ 0.69
ATG4B-225ENST00000494465 DLEC1Q9Y238 1755 aa19.35■□□□□ 0.69
ATG4B-225ENST00000494465 CPLX1O14810 134 aa19.35■□□□□ 0.69
ATG4B-225ENST00000494465 NFXL1Q6ZNB6 911 aa19.35■□□□□ 0.69
ATG4B-225ENST00000494465 MICU3Q86XE3 530 aa19.35■□□□□ 0.69
ATG4B-225ENST00000494465 MYL10Q9BUA6 226 aa19.35■□□□□ 0.69
ATG4B-225ENST00000494465 ORC3Q9UBD5 711 aaPredicted RBP19.35■□□□□ 0.69
ATG4B-225ENST00000494465 ELP1O95163 1332 aa19.35■□□□□ 0.69
ATG4B-225ENST00000494465 ALDH1B1P30837 517 aa19.34■□□□□ 0.69
ATG4B-225ENST00000494465 NTRK3Q16288 839 aa19.34■□□□□ 0.69
ATG4B-225ENST00000494465 MASTLQ96GX5 879 aa19.34■□□□□ 0.69
ATG4B-225ENST00000494465 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.34■□□□□ 0.69
ATG4B-225ENST00000494465 PCP11498 1178 aaKnown RBP19.34■□□□□ 0.69
ATG4B-225ENST00000494465 MRE11P49959 708 aa19.34■□□□□ 0.69
ATG4B-225ENST00000494465 PPP4CP60510 307 aa19.34■□□□□ 0.69
ATG4B-225ENST00000494465 GSTO1P78417 241 aa19.34■□□□□ 0.69
ATG4B-225ENST00000494465 SEC23AQ15436 765 aa19.34■□□□□ 0.69
ATG4B-225ENST00000494465 SBK1Q52WX2 424 aa19.34■□□□□ 0.69
ATG4B-225ENST00000494465 ESR2Q92731 530 aa19.34■□□□□ 0.69
ATG4B-225ENST00000494465 GRPEL1Q9HAV7 217 aa19.34■□□□□ 0.69
ATG4B-225ENST00000494465 WTAPQ15007 396 aa19.33■□□□□ 0.69
ATG4B-225ENST00000494465 TFIP11Q9UBB9 837 aaKnown RBP19.33■□□□□ 0.69
ATG4B-225ENST00000494465 SLC12A7Q9Y666 1083 aa19.33■□□□□ 0.69
ATG4B-225ENST00000494465 MROH7-TTC4A0A0A0MT08 1334 aa19.33■□□□□ 0.69
ATG4B-225ENST00000494465 FAM205AQ6ZU69 1335 aa19.33■□□□□ 0.69
ATG4B-225ENST00000494465 CCDC69A6NI79 296 aa19.33■□□□□ 0.68
ATG4B-225ENST00000494465 CYP2D6P10635 497 aa19.33■□□□□ 0.68
ATG4B-225ENST00000494465 GUCY1B3Q02153 619 aa19.33■□□□□ 0.68
ATG4B-225ENST00000494465 SART3Q15020 963 aaKnown RBP19.33■□□□□ 0.68
ATG4B-225ENST00000494465 CCDC144CPQ8IYA2 1237 aa19.33■□□□□ 0.68
ATG4B-225ENST00000494465 SH3RF3Q8TEJ3 882 aaPredicted RBP19.33■□□□□ 0.68
ATG4B-225ENST00000494465 RTFDC1Q9BY42 306 aaPredicted RBP19.33■□□□□ 0.68
ATG4B-225ENST00000494465 NAV1Q8NEY1 1877 aa19.32■□□□□ 0.68
ATG4B-225ENST00000494465 ILDR1Q86SU0 546 aaPredicted RBP19.32■□□□□ 0.68
ATG4B-225ENST00000494465 ARPP21Q9UBL0 812 aaPredicted RBP19.32■□□□□ 0.68
ATG4B-225ENST00000494465 GOLGA8AA7E2F4 631 aa19.32■□□□□ 0.68
ATG4B-225ENST00000494465 MPNDQ8N594 471 aa19.32■□□□□ 0.68
ATG4B-225ENST00000494465 LEO1Q8WVC0 666 aaPredicted RBP19.32■□□□□ 0.68
ATG4B-225ENST00000494465 SCAND2PQ9GZW5 306 aaPredicted RBP19.32■□□□□ 0.68
ATG4B-225ENST00000494465 ORC4O43929 436 aa19.31■□□□□ 0.68
ATG4B-225ENST00000494465 RANBP6O60518 1105 aaKnown RBP19.31■□□□□ 0.68
ATG4B-225ENST00000494465 PRDM1O75626 825 aa19.31■□□□□ 0.68
ATG4B-225ENST00000494465 MFSD14BQ5SR56 506 aa19.31■□□□□ 0.68
ATG4B-225ENST00000494465 OTUD7BQ6GQQ9 843 aa19.31■□□□□ 0.68
ATG4B-225ENST00000494465 TMTC2Q8N394 836 aa19.31■□□□□ 0.68
ATG4B-225ENST00000494465 FBXO18Q8NFZ0 1043 aa19.31■□□□□ 0.68
ATG4B-225ENST00000494465 TNKSO95271 1327 aa19.31■□□□□ 0.68
ATG4B-225ENST00000494465 RIMBP2O15034 1052 aa19.3■□□□□ 0.68
ATG4B-225ENST00000494465 C8orf76Q96K31 380 aa19.3■□□□□ 0.68
ATG4B-225ENST00000494465 UBAC1Q9BSL1 405 aa19.3■□□□□ 0.68
ATG4B-225ENST00000494465 COA1Q9GZY4 146 aa19.3■□□□□ 0.68
ATG4B-225ENST00000494465 GJB4Q9NTQ9 266 aa19.3■□□□□ 0.68
ATG4B-225ENST00000494465 SLX4Q8IY92 1834 aa19.3■□□□□ 0.68
ATG4B-225ENST00000494465 ERICH2A1L162 156 aa19.3■□□□□ 0.68
ATG4B-225ENST00000494465 SYCE3A1L190 88 aa19.3■□□□□ 0.68
ATG4B-225ENST00000494465 CDKL5O76039 1030 aa19.3■□□□□ 0.68
ATG4B-225ENST00000494465 LDHCP07864 332 aa19.3■□□□□ 0.68
ATG4B-225ENST00000494465 USP17L8P0C7I0 530 aa19.3■□□□□ 0.68
ATG4B-225ENST00000494465 ENAHQ8N8S7 591 aaPredicted RBP19.3■□□□□ 0.68
ATG4B-225ENST00000494465 TBC1D22AQ8WUA7 517 aa19.3■□□□□ 0.68
ATG4B-225ENST00000494465 PHKBQ93100 1093 aa19.3■□□□□ 0.68
ATG4B-225ENST00000494465 DDX60LQ5H9U9 1706 aaKnown RBP19.3■□□□□ 0.68
ATG4B-225ENST00000494465 BAG3O95817 575 aa19.29■□□□□ 0.68
ATG4B-225ENST00000494465 C2CD5Q86YS7 1000 aa19.29■□□□□ 0.68
ATG4B-225ENST00000494465 RGS22Q8NE09 1264 aa19.29■□□□□ 0.68
ATG4B-225ENST00000494465 SYAP1Q96A49 352 aaPredicted RBP19.29■□□□□ 0.68
ATG4B-225ENST00000494465 SPATA32Q96LK8 384 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms