RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-231	ENST00000494043	USP17L21	D6R901	530 aa		13.55	□□□□□ -0.24
MCF2L-231	ENST00000494043	DDN	O94850	711 aa	Predicted RBP	13.55	□□□□□ -0.24
MCF2L-231	ENST00000494043	PPARA	Q07869	468 aa		13.55	□□□□□ -0.24
MCF2L-231	ENST00000494043	ADCK5	Q3MIX3	580 aa		13.55	□□□□□ -0.24
MCF2L-231	ENST00000494043	STOX1	Q6ZVD7	989 aa		13.55	□□□□□ -0.24
MCF2L-231	ENST00000494043	TBC1D10C	Q8IV04	446 aa		13.55	□□□□□ -0.24
MCF2L-231	ENST00000494043	JAKMIP1	Q96N16	626 aa	Known RBP	13.55	□□□□□ -0.24
MCF2L-231	ENST00000494043	IDI2	Q9BXS1	227 aa		13.55	□□□□□ -0.24
MCF2L-231	ENST00000494043	TM6SF1	Q9BZW5	370 aa		13.55	□□□□□ -0.24
MCF2L-231	ENST00000494043	TDRD3	Q9H7E2	651 aa	Known RBP	13.55	□□□□□ -0.24
MCF2L-231	ENST00000494043	DDX4	Q9NQI0	724 aa	Known RBP	13.55	□□□□□ -0.24
MCF2L-231	ENST00000494043	MCM9	Q9NXL9	1143 aa		13.55	□□□□□ -0.24
MCF2L-231	ENST00000494043	GPRC5D	Q9NZD1	345 aa		13.55	□□□□□ -0.24
MCF2L-231	ENST00000494043	ANAPC4	Q9UJX5	808 aa		13.55	□□□□□ -0.24
MCF2L-231	ENST00000494043	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.54	□□□□□ -0.24
MCF2L-231	ENST00000494043	CYP2D7	A0A087X1C5	515 aa		13.54	□□□□□ -0.24
MCF2L-231	ENST00000494043	MINDY4B	A8MYZ0	360 aa		13.54	□□□□□ -0.24
MCF2L-231	ENST00000494043		E7EWF7	191 aa		13.54	□□□□□ -0.24
MCF2L-231	ENST00000494043		H7C1D1	291 aa		13.54	□□□□□ -0.24
MCF2L-231	ENST00000494043	WNT10B	O00744	389 aa		13.54	□□□□□ -0.24
MCF2L-231	ENST00000494043	NPM3	O75607	178 aa	Known RBP	13.54	□□□□□ -0.24
MCF2L-231	ENST00000494043	PSMA5	P28066	241 aa		13.54	□□□□□ -0.24
MCF2L-231	ENST00000494043	ANP32A	P39687	249 aa	Known RBP	13.54	□□□□□ -0.24
MCF2L-231	ENST00000494043	CACNB3	P54284	484 aa		13.54	□□□□□ -0.24
MCF2L-231	ENST00000494043	NFIA	Q12857	509 aa		13.54	□□□□□ -0.24
MCF2L-231	ENST00000494043	PICALM	Q13492	652 aa		13.54	□□□□□ -0.24
MCF2L-231	ENST00000494043	SPDYE2	Q495Y8	402 aa		13.54	□□□□□ -0.24
MCF2L-231	ENST00000494043	AMOTL1	Q8IY63	956 aa		13.54	□□□□□ -0.24
MCF2L-231	ENST00000494043	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.54	□□□□□ -0.24
MCF2L-231	ENST00000494043	TMOD2	Q9NZR1	351 aa		13.54	□□□□□ -0.24
MCF2L-231	ENST00000494043	ZNF70	Q9UC06	446 aa	Predicted RBP	13.54	□□□□□ -0.24
MCF2L-231	ENST00000494043	SAP30BP	Q9UHR5	308 aa	Known RBP	13.54	□□□□□ -0.24
MCF2L-231	ENST00000494043	MYO1B	O43795	1136 aa		13.53	□□□□□ -0.24
MCF2L-231	ENST00000494043	EGFR	P00533	1210 aa		13.53	□□□□□ -0.24
MCF2L-231	ENST00000494043	CYP2D6	P10635	497 aa		13.53	□□□□□ -0.24
MCF2L-231	ENST00000494043	CAST	P20810	708 aa	Known RBP	13.53	□□□□□ -0.24
MCF2L-231	ENST00000494043	CTDSPL2	Q05D32	466 aa		13.53	□□□□□ -0.24
MCF2L-231	ENST00000494043	KIF4B	Q2VIQ3	1234 aa		13.53	□□□□□ -0.24
MCF2L-231	ENST00000494043	NBPF9	Q3BBW0	867 aa		13.53	□□□□□ -0.24
MCF2L-231	ENST00000494043	C12orf60	Q5U649	245 aa		13.53	□□□□□ -0.24
MCF2L-231	ENST00000494043	DPY19L2	Q6NUT2	758 aa		13.53	□□□□□ -0.24
MCF2L-231	ENST00000494043	SAMD7	Q7Z3H4	446 aa		13.53	□□□□□ -0.24
MCF2L-231	ENST00000494043	STAG1	Q8WVM7	1258 aa		13.53	□□□□□ -0.24
MCF2L-231	ENST00000494043	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.53	□□□□□ -0.24
MCF2L-231	ENST00000494043	FAM198A	Q9UFP1	575 aa		13.53	□□□□□ -0.24
MCF2L-231	ENST00000494043	ROBO3	Q96MS0	1386 aa		13.53	□□□□□ -0.24
MCF2L-231	ENST00000494043	COL2A1	P02458	1487 aa	Predicted RBP	13.53	□□□□□ -0.24
MCF2L-231	ENST00000494043	CLRN2	A0PK11	232 aa		13.52	□□□□□ -0.25
MCF2L-231	ENST00000494043	ENTPD3	O75355	529 aa		13.52	□□□□□ -0.25
MCF2L-231	ENST00000494043	POLR3D	P05423	398 aa	Predicted RBP	13.52	□□□□□ -0.25
MCF2L-231	ENST00000494043	LMOD1	P29536	600 aa	Predicted RBP	13.52	□□□□□ -0.25
MCF2L-231	ENST00000494043	EPS15	P42566	896 aa		13.52	□□□□□ -0.25
MCF2L-231	ENST00000494043	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.52	□□□□□ -0.25
MCF2L-231	ENST00000494043	AKNAD1	Q5T1N1	836 aa		13.52	□□□□□ -0.25
MCF2L-231	ENST00000494043	RBM26	Q5T8P6	1007 aa	Known RBP	13.52	□□□□□ -0.25
MCF2L-231	ENST00000494043	FKBP1C	Q5VVH2	108 aa		13.52	□□□□□ -0.25
MCF2L-231	ENST00000494043	NEK1	Q96PY6	1258 aa		13.52	□□□□□ -0.25
MCF2L-231	ENST00000494043	UPF3B	Q9BZI7	483 aa	Known RBP	13.52	□□□□□ -0.25
MCF2L-231	ENST00000494043	RNF41	Q9H4P4	317 aa	Predicted RBP	13.52	□□□□□ -0.25
MCF2L-231	ENST00000494043	ZSWIM6	Q9HCJ5	1215 aa		13.52	□□□□□ -0.25
MCF2L-231	ENST00000494043	CYP46A1	Q9Y6A2	500 aa		13.52	□□□□□ -0.25
MCF2L-231	ENST00000494043	NEDD4	P46934	1319 aa		13.51	□□□□□ -0.25
MCF2L-231	ENST00000494043	DCAF8L1	A6NGE4	600 aa		13.51	□□□□□ -0.25
MCF2L-231	ENST00000494043	GLTPD2	A6NH11	291 aa		13.51	□□□□□ -0.25
MCF2L-231	ENST00000494043	SMIM22	K7EJ46	135 aa		13.51	□□□□□ -0.25
MCF2L-231	ENST00000494043	SLC3A2	P08195	630 aa	Known RBP	13.51	□□□□□ -0.25
MCF2L-231	ENST00000494043	HMGB1	P09429	215 aa	Known RBP	13.51	□□□□□ -0.25
MCF2L-231	ENST00000494043	PC	P11498	1178 aa	Known RBP	13.51	□□□□□ -0.25
MCF2L-231	ENST00000494043	NEK4	P51957	841 aa		13.51	□□□□□ -0.25
MCF2L-231	ENST00000494043	EVX2	Q03828	476 aa		13.51	□□□□□ -0.25
MCF2L-231	ENST00000494043	SLC4A8	Q2Y0W8	1093 aa		13.51	□□□□□ -0.25
MCF2L-231	ENST00000494043	BLOC1S2	Q6QNY1	142 aa		13.51	□□□□□ -0.25
MCF2L-231	ENST00000494043	MFSD6	Q6ZSS7	791 aa		13.51	□□□□□ -0.25
MCF2L-231	ENST00000494043	RUFY3	Q7L099	469 aa		13.51	□□□□□ -0.25
MCF2L-231	ENST00000494043	IL27	Q8NEV9	243 aa		13.51	□□□□□ -0.25
MCF2L-231	ENST00000494043	TRPM4	Q8TD43	1214 aa		13.51	□□□□□ -0.25
MCF2L-231	ENST00000494043	CNNM2	Q9H8M5	875 aa		13.51	□□□□□ -0.25
MCF2L-231	ENST00000494043	VEZT	Q9HBM0	779 aa		13.51	□□□□□ -0.25
MCF2L-231	ENST00000494043	TACC3	Q9Y6A5	838 aa		13.51	□□□□□ -0.25
MCF2L-231	ENST00000494043	MYH1	P12882	1939 aa		13.51	□□□□□ -0.25
MCF2L-231	ENST00000494043	CNTNAP1	P78357	1384 aa		13.5	□□□□□ -0.25
MCF2L-231	ENST00000494043	ATRNL1	Q5VV63	1379 aa		13.5	□□□□□ -0.25
MCF2L-231	ENST00000494043	TCP10L2	B9ZVM9	353 aa		13.5	□□□□□ -0.25
MCF2L-231	ENST00000494043	ST18	O60284	1047 aa		13.5	□□□□□ -0.25
MCF2L-231	ENST00000494043	FGR	P09769	529 aa		13.5	□□□□□ -0.25
MCF2L-231	ENST00000494043	CPA1	P15085	419 aa		13.5	□□□□□ -0.25
MCF2L-231	ENST00000494043	RPS6KB1	P23443	525 aa		13.5	□□□□□ -0.25
MCF2L-231	ENST00000494043	PLCD1	P51178	756 aa		13.5	□□□□□ -0.25
MCF2L-231	ENST00000494043	TCP10	Q12799	353 aa		13.5	□□□□□ -0.25
MCF2L-231	ENST00000494043	TRDN	Q13061	729 aa		13.5	□□□□□ -0.25
MCF2L-231	ENST00000494043	COL9A3	Q14050	684 aa	Predicted RBP	13.5	□□□□□ -0.25
MCF2L-231	ENST00000494043	RALYL	Q86SE5	291 aa	Known RBP	13.5	□□□□□ -0.25
MCF2L-231	ENST00000494043	TTC6	Q86TZ1	520 aa		13.5	□□□□□ -0.25
MCF2L-231	ENST00000494043	ZFPM1	Q8IX07	1006 aa		13.5	□□□□□ -0.25
MCF2L-231	ENST00000494043	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.5	□□□□□ -0.25
MCF2L-231	ENST00000494043	NCOA7	Q8NI08	942 aa		13.5	□□□□□ -0.25
MCF2L-231	ENST00000494043	KRT23	Q9C075	422 aa		13.5	□□□□□ -0.25
MCF2L-231	ENST00000494043	DHX36	Q9H2U1	1008 aa	Known RBP	13.5	□□□□□ -0.25
MCF2L-231	ENST00000494043	ADARB2	Q9NS39	739 aa	Known RBP	13.5	□□□□□ -0.25
MCF2L-231	ENST00000494043	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.5	□□□□□ -0.25

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