RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 ZSCAN16Q9H4T2 348 aaPredicted RBP12.48□□□□□ -0.41
CLCN6-208ENST00000494028 PODXL2Q9NZ53 605 aa12.48□□□□□ -0.41
CLCN6-208ENST00000494028 ANKIB1Q9P2G1 1089 aa12.48□□□□□ -0.41
CLCN6-208ENST00000494028 JAG2Q9Y219 1238 aa12.48□□□□□ -0.41
CLCN6-208ENST00000494028 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.48□□□□□ -0.41
CLCN6-208ENST00000494028 SMIM22K7EJ46 135 aa12.47□□□□□ -0.41
CLCN6-208ENST00000494028 PPEF1O14829 653 aaPredicted RBP12.47□□□□□ -0.41
CLCN6-208ENST00000494028 DHX16O60231 1041 aaKnown RBP12.47□□□□□ -0.41
CLCN6-208ENST00000494028 PPFIA3O75145 1194 aa12.47□□□□□ -0.41
CLCN6-208ENST00000494028 RXRAP19793 462 aa12.47□□□□□ -0.41
CLCN6-208ENST00000494028 LIFRP42702 1097 aa12.47□□□□□ -0.41
CLCN6-208ENST00000494028 EN1Q05925 392 aaPredicted RBP12.47□□□□□ -0.41
CLCN6-208ENST00000494028 MFSD6Q6ZSS7 791 aa12.47□□□□□ -0.41
CLCN6-208ENST00000494028 DZIP1Q86YF9 867 aaKnown RBP12.47□□□□□ -0.41
CLCN6-208ENST00000494028 WDR66Q8TBY9 1149 aa12.47□□□□□ -0.41
CLCN6-208ENST00000494028 ORC3Q9UBD5 711 aaPredicted RBP12.47□□□□□ -0.41
CLCN6-208ENST00000494028 GGA1Q9UJY5 639 aa12.47□□□□□ -0.41
CLCN6-208ENST00000494028 SNED1Q8TER0 1413 aa12.46□□□□□ -0.41
CLCN6-208ENST00000494028 CYP2D7A0A087X1C5 515 aa12.46□□□□□ -0.41
CLCN6-208ENST00000494028 IFIT3O14879 490 aaKnown RBP12.46□□□□□ -0.41
CLCN6-208ENST00000494028 ZBTB43O43298 467 aa12.46□□□□□ -0.41
CLCN6-208ENST00000494028 RANBP6O60518 1105 aaKnown RBP12.46□□□□□ -0.41
CLCN6-208ENST00000494028 CDC27P30260 824 aa12.46□□□□□ -0.41
CLCN6-208ENST00000494028 ADD1P35611 737 aaKnown RBP12.46□□□□□ -0.41
CLCN6-208ENST00000494028 GUCY1B3Q02153 619 aa12.46□□□□□ -0.41
CLCN6-208ENST00000494028 EZH2Q15910 746 aaKnown RBP12.46□□□□□ -0.41
CLCN6-208ENST00000494028 GRIK5Q16478 980 aa12.46□□□□□ -0.41
CLCN6-208ENST00000494028 RRP12Q5JTH9 1297 aaKnown RBP12.46□□□□□ -0.41
CLCN6-208ENST00000494028 SPTY2D1Q68D10 685 aaPredicted RBP12.46□□□□□ -0.41
CLCN6-208ENST00000494028 TMC4Q7Z404 712 aa12.46□□□□□ -0.41
CLCN6-208ENST00000494028 C8orf76Q96K31 380 aa12.46□□□□□ -0.41
CLCN6-208ENST00000494028 MYL10Q9BUA6 226 aa12.46□□□□□ -0.41
CLCN6-208ENST00000494028 CRNKL1Q9BZJ0 848 aaKnown RBP12.46□□□□□ -0.41
CLCN6-208ENST00000494028 FAM217BQ9NTX9 383 aaPredicted RBP12.46□□□□□ -0.41
CLCN6-208ENST00000494028 AATFQ9NY61 560 aaKnown RBP eCLIP12.46□□□□□ -0.41
CLCN6-208ENST00000494028 ZSWIM5Q9P217 1185 aa12.46□□□□□ -0.41
CLCN6-208ENST00000494028 SLX4Q8IY92 1834 aa12.46□□□□□ -0.42
CLCN6-208ENST00000494028 MROH7-TTC4A0A0A0MT08 1334 aa12.45□□□□□ -0.42
CLCN6-208ENST00000494028 TNKSO95271 1327 aa12.45□□□□□ -0.42
CLCN6-208ENST00000494028 MINDY4BA8MYZ0 360 aa12.45□□□□□ -0.42
CLCN6-208ENST00000494028 CPLX1O14810 134 aa12.45□□□□□ -0.42
CLCN6-208ENST00000494028 CDKL5O76039 1030 aa12.45□□□□□ -0.42
CLCN6-208ENST00000494028 FGRP09769 529 aa12.45□□□□□ -0.42
CLCN6-208ENST00000494028 IL1R1P14778 569 aa12.45□□□□□ -0.42
CLCN6-208ENST00000494028 RCAN1P53805 252 aa12.45□□□□□ -0.42
CLCN6-208ENST00000494028 EVX2Q03828 476 aa12.45□□□□□ -0.42
CLCN6-208ENST00000494028 WTAPQ15007 396 aa12.45□□□□□ -0.42
CLCN6-208ENST00000494028 SEC23AQ15436 765 aa12.45□□□□□ -0.42
CLCN6-208ENST00000494028 NTRK3Q16288 839 aa12.45□□□□□ -0.42
CLCN6-208ENST00000494028 CTR9Q6PD62 1173 aa12.45□□□□□ -0.42
CLCN6-208ENST00000494028 NFXL1Q6ZNB6 911 aa12.45□□□□□ -0.42
CLCN6-208ENST00000494028 CCDC125Q86Z20 511 aa12.45□□□□□ -0.42
CLCN6-208ENST00000494028 RGS22Q8NE09 1264 aa12.45□□□□□ -0.42
CLCN6-208ENST00000494028 TBC1D16Q8TBP0 767 aa12.45□□□□□ -0.42
CLCN6-208ENST00000494028 SPATA32Q96LK8 384 aa12.45□□□□□ -0.42
CLCN6-208ENST00000494028 SCAND2PQ9GZW5 306 aaPredicted RBP12.45□□□□□ -0.42
CLCN6-208ENST00000494028 RBSNQ9H1K0 784 aa12.45□□□□□ -0.42
CLCN6-208ENST00000494028 ANO8Q9HCE9 1232 aaPredicted RBP12.45□□□□□ -0.42
CLCN6-208ENST00000494028 DCP1AQ9NPI6 582 aaPredicted RBP12.45□□□□□ -0.42
CLCN6-208ENST00000494028 ARPP21Q9UBL0 812 aaPredicted RBP12.45□□□□□ -0.42
CLCN6-208ENST00000494028 SCN9AQ15858 1988 aa12.45□□□□□ -0.42
CLCN6-208ENST00000494028 SIPA1L1O43166 1804 aa12.44□□□□□ -0.42
CLCN6-208ENST00000494028 KIF13BQ9NQT8 1826 aa12.44□□□□□ -0.42
CLCN6-208ENST00000494028 CCDC69A6NI79 296 aa12.44□□□□□ -0.42
CLCN6-208ENST00000494028 ORC4O43929 436 aa12.44□□□□□ -0.42
CLCN6-208ENST00000494028 BBOX1O75936 387 aa12.44□□□□□ -0.42
CLCN6-208ENST00000494028 LDHBP07195 334 aaKnown RBP12.44□□□□□ -0.42
CLCN6-208ENST00000494028 CYP2D6P10635 497 aa12.44□□□□□ -0.42
CLCN6-208ENST00000494028 PCP11498 1178 aaKnown RBP12.44□□□□□ -0.42
CLCN6-208ENST00000494028 LIG1P18858 919 aa12.44□□□□□ -0.42
CLCN6-208ENST00000494028 NASPP49321 788 aaPredicted RBP12.44□□□□□ -0.42
CLCN6-208ENST00000494028 SART3Q15020 963 aaKnown RBP12.44□□□□□ -0.42
CLCN6-208ENST00000494028 SBK1Q52WX2 424 aa12.44□□□□□ -0.42
CLCN6-208ENST00000494028 STK11IPQ8N1F8 1099 aa12.44□□□□□ -0.42
CLCN6-208ENST00000494028 FLAD1Q8NFF5 587 aa12.44□□□□□ -0.42
CLCN6-208ENST00000494028 ESR2Q92731 530 aa12.44□□□□□ -0.42
CLCN6-208ENST00000494028 USP28Q96RU2 1077 aa12.44□□□□□ -0.42
CLCN6-208ENST00000494028 ZKSCAN3Q9BRR0 538 aa12.44□□□□□ -0.42
CLCN6-208ENST00000494028 RTFDC1Q9BY42 306 aaPredicted RBP12.44□□□□□ -0.42
CLCN6-208ENST00000494028 FTOQ9C0B1 505 aaKnown RBP eCLIP12.44□□□□□ -0.42
CLCN6-208ENST00000494028 CD209Q9NNX6 404 aa12.44□□□□□ -0.42
CLCN6-208ENST00000494028 TOMM22Q9NS69 142 aa12.44□□□□□ -0.42
CLCN6-208ENST00000494028 GREB1LQ9C091 1923 aaPredicted RBP12.44□□□□□ -0.42
CLCN6-208ENST00000494028 FAM205AQ6ZU69 1335 aa12.43□□□□□ -0.42
CLCN6-208ENST00000494028 KIF28PB7ZC32 967 aa12.43□□□□□ -0.42
CLCN6-208ENST00000494028 MMP10P09238 476 aa12.43□□□□□ -0.42
CLCN6-208ENST00000494028 SRGNP10124 158 aa12.43□□□□□ -0.42
CLCN6-208ENST00000494028 KIF23Q02241 960 aaPredicted RBP12.43□□□□□ -0.42
CLCN6-208ENST00000494028 RTN1Q16799 776 aa12.43□□□□□ -0.42
CLCN6-208ENST00000494028 OTUD7BQ6GQQ9 843 aa12.43□□□□□ -0.42
CLCN6-208ENST00000494028 CPLX2Q6PUV4 134 aaKnown RBP12.43□□□□□ -0.42
CLCN6-208ENST00000494028 CCDC144CPQ8IYA2 1237 aa12.43□□□□□ -0.42
CLCN6-208ENST00000494028 ZNF654Q8IZM8 581 aa12.43□□□□□ -0.42
CLCN6-208ENST00000494028 NLGN1Q8N2Q7 840 aa12.43□□□□□ -0.42
CLCN6-208ENST00000494028 FBXO18Q8NFZ0 1043 aa12.43□□□□□ -0.42
CLCN6-208ENST00000494028 PGBD1Q96JS3 809 aa12.43□□□□□ -0.42
CLCN6-208ENST00000494028 AIFM3Q96NN9 605 aa12.43□□□□□ -0.42
CLCN6-208ENST00000494028 ALG1Q9BT22 464 aa12.43□□□□□ -0.42
CLCN6-208ENST00000494028 FUCA2Q9BTY2 467 aa12.43□□□□□ -0.42
CLCN6-208ENST00000494028 TSPY26PQ9H489 355 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms