RNA–Protein interactions for RNA: ENST00000493416.5

ABCD3-206, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 5

Gene ABCD3, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-206ENST00000493416 PCOLCE2Q9UKZ9 415 aa7.46□□□□□ -1.22
ABCD3-206ENST00000493416 GSTP1P09211 210 aaKnown RBP7.45□□□□□ -1.22
ABCD3-206ENST00000493416 RAP1GAPP47736 663 aa7.45□□□□□ -1.22
ABCD3-206ENST00000493416 PRPF40BQ6NWY9 871 aaKnown RBP7.45□□□□□ -1.22
ABCD3-206ENST00000493416 TNKS2Q9H2K2 1166 aa7.45□□□□□ -1.22
ABCD3-206ENST00000493416 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.44□□□□□ -1.22
ABCD3-206ENST00000493416 CPNE3O75131 537 aaKnown RBP7.44□□□□□ -1.22
ABCD3-206ENST00000493416 NEFLP07196 543 aa7.44□□□□□ -1.22
ABCD3-206ENST00000493416 IKZF1Q13422 519 aa7.44□□□□□ -1.22
ABCD3-206ENST00000493416 RPS26P11Q5JNZ5 115 aaPredicted RBP7.44□□□□□ -1.22
ABCD3-206ENST00000493416 ISL2Q96A47 359 aa7.44□□□□□ -1.22
ABCD3-206ENST00000493416 LIN37Q96GY3 246 aaPredicted RBP7.44□□□□□ -1.22
ABCD3-206ENST00000493416 TOX2Q96NM4 488 aa7.44□□□□□ -1.22
ABCD3-206ENST00000493416 KRT82Q9NSB4 513 aa7.44□□□□□ -1.22
ABCD3-206ENST00000493416 FAM53CQ9NYF3 392 aa7.44□□□□□ -1.22
ABCD3-206ENST00000493416 BRPF3Q9ULD4 1205 aa7.44□□□□□ -1.22
ABCD3-206ENST00000493416 TSPAN15O95858 294 aa7.43□□□□□ -1.22
ABCD3-206ENST00000493416 CFPP27918 469 aa7.43□□□□□ -1.22
ABCD3-206ENST00000493416 HNRNPUQ00839 825 aaKnown RBP eCLIP7.43□□□□□ -1.22
ABCD3-206ENST00000493416 ZP2Q05996 745 aa7.43□□□□□ -1.22
ABCD3-206ENST00000493416 CCER1Q8TC90 406 aaPredicted RBP7.43□□□□□ -1.22
ABCD3-206ENST00000493416 HEXIM2Q96MH2 286 aaKnown RBP7.43□□□□□ -1.22
ABCD3-206ENST00000493416 SSU72Q9NP77 194 aaKnown RBP7.43□□□□□ -1.22
ABCD3-206ENST00000493416 TMEM238LA0A1B0GVL6 79 aa7.42□□□□□ -1.22
ABCD3-206ENST00000493416 GADD45BO75293 160 aaPredicted RBP7.42□□□□□ -1.22
ABCD3-206ENST00000493416 C1QL4Q86Z23 238 aa7.42□□□□□ -1.22
ABCD3-206ENST00000493416 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.42□□□□□ -1.22
ABCD3-206ENST00000493416 LRRC56Q8IYG6 542 aaPredicted RBP7.42□□□□□ -1.22
ABCD3-206ENST00000493416 ASB11Q8WXH4 323 aa7.42□□□□□ -1.22
ABCD3-206ENST00000493416 KCNB2Q92953 911 aa7.42□□□□□ -1.22
ABCD3-206ENST00000493416 CTNND2Q9UQB3 1225 aa7.42□□□□□ -1.22
ABCD3-206ENST00000493416 CARNS1A5YM72 827 aa7.41□□□□□ -1.22
ABCD3-206ENST00000493416 LCNL1Q6ZST4 164 aa7.41□□□□□ -1.22
ABCD3-206ENST00000493416 PPP1R16BQ96T49 567 aa7.41□□□□□ -1.22
ABCD3-206ENST00000493416 KRTAP4-5Q9BYR2 181 aa7.41□□□□□ -1.22
ABCD3-206ENST00000493416 GPN3Q9UHW5 284 aaPredicted RBP7.41□□□□□ -1.22
ABCD3-206ENST00000493416 SNX11Q9Y5W9 270 aa7.41□□□□□ -1.22
ABCD3-206ENST00000493416 H3BRB1 525 aa7.4□□□□□ -1.22
ABCD3-206ENST00000493416 FYB2Q5VWT5 728 aa7.4□□□□□ -1.22
ABCD3-206ENST00000493416 PDZD3Q86UT5 571 aa7.4□□□□□ -1.22
ABCD3-206ENST00000493416 SPACA3Q8IXA5 215 aa7.4□□□□□ -1.22
ABCD3-206ENST00000493416 ZSCAN18Q8TBC5 510 aaPredicted RBP7.4□□□□□ -1.22
ABCD3-206ENST00000493416 CCDC74AQ96AQ1 378 aa7.4□□□□□ -1.22
ABCD3-206ENST00000493416 TUT1Q9H6E5 874 aaKnown RBP7.4□□□□□ -1.22
ABCD3-206ENST00000493416 ICMTO60725 284 aa7.39□□□□□ -1.23
ABCD3-206ENST00000493416 GRM2Q14416 872 aa7.39□□□□□ -1.23
ABCD3-206ENST00000493416 LILRA6Q6PI73 481 aa7.39□□□□□ -1.23
ABCD3-206ENST00000493416 PRR23BQ6ZRT6 265 aa7.39□□□□□ -1.23
ABCD3-206ENST00000493416 SYDE1Q6ZW31 735 aaPredicted RBP7.39□□□□□ -1.23
ABCD3-206ENST00000493416 TRAK1Q9UPV9 953 aa7.39□□□□□ -1.23
ABCD3-206ENST00000493416 ARID3CA6NKF2 412 aa7.38□□□□□ -1.23
ABCD3-206ENST00000493416 NDUFB5O43674 189 aa7.38□□□□□ -1.23
ABCD3-206ENST00000493416 MPZL3Q6UWV2 235 aa7.38□□□□□ -1.23
ABCD3-206ENST00000493416 FAM214BQ7L5A3 538 aa7.38□□□□□ -1.23
ABCD3-206ENST00000493416 RNF214Q8ND24 703 aa7.38□□□□□ -1.23
ABCD3-206ENST00000493416 FAM129BQ96TA1 746 aa7.38□□□□□ -1.23
ABCD3-206ENST00000493416 GTF2IRD1Q9UHL9 959 aa7.38□□□□□ -1.23
ABCD3-206ENST00000493416 EIF1AYO14602 144 aaKnown RBP7.37□□□□□ -1.23
ABCD3-206ENST00000493416 ZSCAN22P10073 491 aaPredicted RBP7.37□□□□□ -1.23
ABCD3-206ENST00000493416 PPP2R3AQ06190 1150 aa7.37□□□□□ -1.23
ABCD3-206ENST00000493416 NKPD1Q17RQ9 610 aa7.37□□□□□ -1.23
ABCD3-206ENST00000493416 ZC3H12AQ5D1E8 599 aaKnown RBP7.37□□□□□ -1.23
ABCD3-206ENST00000493416 DTHD1Q6ZMT9 781 aa7.37□□□□□ -1.23
ABCD3-206ENST00000493416 GLYCTKQ8IVS8 523 aa7.37□□□□□ -1.23
ABCD3-206ENST00000493416 STK35Q8TDR2 534 aa7.37□□□□□ -1.23
ABCD3-206ENST00000493416 TMEM39AQ9NV64 488 aa7.37□□□□□ -1.23
ABCD3-206ENST00000493416 LMCD1Q9NZU5 365 aa7.37□□□□□ -1.23
ABCD3-206ENST00000493416 EGFL7Q9UHF1 273 aa7.37□□□□□ -1.23
ABCD3-206ENST00000493416 PITPNM2Q9BZ72 1349 aa7.36□□□□□ -1.23
ABCD3-206ENST00000493416 IGF2BP3O00425 579 aaKnown RBP eCLIP7.36□□□□□ -1.23
ABCD3-206ENST00000493416 GLI1P08151 1106 aa7.36□□□□□ -1.23
ABCD3-206ENST00000493416 AFMP43652 599 aa7.36□□□□□ -1.23
ABCD3-206ENST00000493416 FCGRTP55899 365 aa7.36□□□□□ -1.23
ABCD3-206ENST00000493416 ERVK-24P63145 666 aa7.36□□□□□ -1.23
ABCD3-206ENST00000493416 PDE3BQ13370 1112 aa7.36□□□□□ -1.23
ABCD3-206ENST00000493416 ECM1Q16610 540 aa7.36□□□□□ -1.23
ABCD3-206ENST00000493416 LCE5AQ5TCM9 118 aa7.36□□□□□ -1.23
ABCD3-206ENST00000493416 MAP1SQ66K74 1059 aaPredicted RBP7.36□□□□□ -1.23
ABCD3-206ENST00000493416 ANKLE2Q86XL3 938 aa7.36□□□□□ -1.23
ABCD3-206ENST00000493416 SULF2Q8IWU5 870 aa7.36□□□□□ -1.23
ABCD3-206ENST00000493416 NCANO14594 1321 aa7.35□□□□□ -1.23
ABCD3-206ENST00000493416 GPR182O15218 404 aa7.35□□□□□ -1.23
ABCD3-206ENST00000493416 C1QTNF9P0C862 333 aa7.35□□□□□ -1.23
ABCD3-206ENST00000493416 ARHGAP4P98171 946 aa7.35□□□□□ -1.23
ABCD3-206ENST00000493416 UBE3DQ7Z6J8 389 aa7.35□□□□□ -1.23
ABCD3-206ENST00000493416 EPS8L3Q8TE67 593 aaKnown RBP7.35□□□□□ -1.23
ABCD3-206ENST00000493416 KIRREL1Q96J84 757 aa7.35□□□□□ -1.23
ABCD3-206ENST00000493416 DNAJC25Q9H1X3 360 aa7.35□□□□□ -1.23
ABCD3-206ENST00000493416 PRDM10Q9NQV6 1147 aa7.35□□□□□ -1.23
ABCD3-206ENST00000493416 GNAT3A8MTJ3 354 aa7.34□□□□□ -1.23
ABCD3-206ENST00000493416 SERPINB4P48594 390 aa7.34□□□□□ -1.23
ABCD3-206ENST00000493416 CLCN7P51798 805 aa7.34□□□□□ -1.23
ABCD3-206ENST00000493416 GPBAR1Q8TDU6 330 aa7.34□□□□□ -1.23
ABCD3-206ENST00000493416 ACSBG1Q96GR2 724 aa7.34□□□□□ -1.23
ABCD3-206ENST00000493416 CSADQ9Y600 493 aa7.34□□□□□ -1.23
ABCD3-206ENST00000493416 PRRG2O14669 202 aa7.33□□□□□ -1.24
ABCD3-206ENST00000493416 KRT1P04264 644 aa7.33□□□□□ -1.24
ABCD3-206ENST00000493416 PPM1JQ5JR12 505 aa7.33□□□□□ -1.24
ABCD3-206ENST00000493416 CYFIP1Q7L576 1253 aa7.33□□□□□ -1.24
ABCD3-206ENST00000493416 SIAH1Q8IUQ4 282 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms