RNA–Protein interactions for RNA: ENST00000492367.1

NUCB1-212, Transcript of nucleobindin 1, humanhuman

TSL 2

Gene NUCB1, Length 1,515 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-212ENST00000492367 TGFBRAP1Q8WUH2 860 aa22.54■■□□□ 1.2
NUCB1-212ENST00000492367 ADAMTSL1Q8N6G6 1762 aa22.54■■□□□ 1.2
NUCB1-212ENST00000492367 DICER1Q9UPY3 1922 aaKnown RBP22.54■■□□□ 1.2
NUCB1-212ENST00000492367 USP17L12C9JPN9 530 aa22.53■■□□□ 1.2
NUCB1-212ENST00000492367 USP17L21D6R901 530 aa22.53■■□□□ 1.2
NUCB1-212ENST00000492367 CPA1P15085 419 aa22.53■■□□□ 1.2
NUCB1-212ENST00000492367 MCM5P33992 734 aa22.53■■□□□ 1.2
NUCB1-212ENST00000492367 SLC4A3P48751 1232 aa22.53■■□□□ 1.2
NUCB1-212ENST00000492367 NT5C2P49902 561 aa22.53■■□□□ 1.2
NUCB1-212ENST00000492367 FGD1P98174 961 aa22.53■■□□□ 1.2
NUCB1-212ENST00000492367 CXCL9Q07325 125 aa22.53■■□□□ 1.2
NUCB1-212ENST00000492367 CTR9Q6PD62 1173 aa22.53■■□□□ 1.2
NUCB1-212ENST00000492367 ZSCAN31Q96LW9 406 aaPredicted RBP22.53■■□□□ 1.2
NUCB1-212ENST00000492367 MCM9Q9NXL9 1143 aa22.53■■□□□ 1.2
NUCB1-212ENST00000492367 DDX60LQ5H9U9 1706 aaKnown RBP22.52■■□□□ 1.2
NUCB1-212ENST00000492367 RPS12P25398 132 aaKnown RBP22.52■■□□□ 1.2
NUCB1-212ENST00000492367 CTDSPL2Q05D32 466 aa22.52■■□□□ 1.2
NUCB1-212ENST00000492367 USP40Q9NVE5 1235 aa22.52■■□□□ 1.2
NUCB1-212ENST00000492367 LIMCH1Q9UPQ0 1083 aa22.52■■□□□ 1.2
NUCB1-212ENST00000492367 MYH1P12882 1939 aa22.52■■□□□ 1.19
NUCB1-212ENST00000492367 LMNB1P20700 586 aa22.52■■□□□ 1.19
NUCB1-212ENST00000492367 GMLQ99445 158 aa22.52■■□□□ 1.19
NUCB1-212ENST00000492367 NBPF3Q9H094 633 aa22.52■■□□□ 1.19
NUCB1-212ENST00000492367 MKRN1Q9UHC7 482 aaKnown RBP22.52■■□□□ 1.19
NUCB1-212ENST00000492367 FLT1P17948 1338 aa22.51■■□□□ 1.19
NUCB1-212ENST00000492367 APOBEC3HQ6NTF7 200 aaKnown RBP22.51■■□□□ 1.19
NUCB1-212ENST00000492367 MAPKAPK5Q8IW41 473 aa22.51■■□□□ 1.19
NUCB1-212ENST00000492367 MB21D2Q8IYB1 491 aaPredicted RBP22.51■■□□□ 1.19
NUCB1-212ENST00000492367 SH2B1Q9NRF2 756 aaPredicted RBP22.51■■□□□ 1.19
NUCB1-212ENST00000492367 FZD9O00144 591 aa22.5■■□□□ 1.19
NUCB1-212ENST00000492367 POLR3DP05423 398 aaPredicted RBP22.5■■□□□ 1.19
NUCB1-212ENST00000492367 USP17L8P0C7I0 530 aa22.5■■□□□ 1.19
NUCB1-212ENST00000492367 EXOSC10Q01780 885 aaKnown RBP22.5■■□□□ 1.19
NUCB1-212ENST00000492367 PDE4BQ07343 736 aa22.5■■□□□ 1.19
NUCB1-212ENST00000492367 CFAP100Q494V2 611 aa22.5■■□□□ 1.19
NUCB1-212ENST00000492367 NOL8Q76FK4 1167 aaKnown RBP22.5■■□□□ 1.19
NUCB1-212ENST00000492367 TOMM22Q9NS69 142 aa22.5■■□□□ 1.19
NUCB1-212ENST00000492367 ROBO3Q96MS0 1386 aa22.49■■□□□ 1.19
NUCB1-212ENST00000492367 C12orf60Q5U649 245 aa22.49■■□□□ 1.19
NUCB1-212ENST00000492367 CDC42EP5Q6NZY7 148 aa22.49■■□□□ 1.19
NUCB1-212ENST00000492367 Q6ZUG5 572 aa22.49■■□□□ 1.19
NUCB1-212ENST00000492367 TMX3Q96JJ7 454 aa22.49■■□□□ 1.19
NUCB1-212ENST00000492367 ZNF287Q9HBT7 754 aa22.49■■□□□ 1.19
NUCB1-212ENST00000492367 NEDD4P46934 1319 aa22.49■■□□□ 1.19
NUCB1-212ENST00000492367 PRC1O43663 620 aa22.48■■□□□ 1.19
NUCB1-212ENST00000492367 FBXL16Q8N461 479 aa22.48■■□□□ 1.19
NUCB1-212ENST00000492367 ESR2Q92731 530 aa22.48■■□□□ 1.19
NUCB1-212ENST00000492367 MTA3Q9BTC8 594 aa22.48■■□□□ 1.19
NUCB1-212ENST00000492367 TMOD2Q9NZR1 351 aa22.48■■□□□ 1.19
NUCB1-212ENST00000492367 SBF1O95248 1867 aa22.47■■□□□ 1.19
NUCB1-212ENST00000492367 B4E1Z4 1266 aa22.47■■□□□ 1.19
NUCB1-212ENST00000492367 NPM3O75607 178 aaKnown RBP22.47■■□□□ 1.19
NUCB1-212ENST00000492367 DLGAP5Q15398 846 aa22.47■■□□□ 1.19
NUCB1-212ENST00000492367 TMEM87BQ96K49 555 aa22.47■■□□□ 1.19
NUCB1-212ENST00000492367 TCEANC2Q96MN5 208 aa22.47■■□□□ 1.19
NUCB1-212ENST00000492367 FGRP09769 529 aa22.47■■□□□ 1.19
NUCB1-212ENST00000492367 SART3Q15020 963 aaKnown RBP22.47■■□□□ 1.19
NUCB1-212ENST00000492367 RRP12Q5JTH9 1297 aaKnown RBP22.47■■□□□ 1.19
NUCB1-212ENST00000492367 TTC6Q86TZ1 520 aa22.47■■□□□ 1.19
NUCB1-212ENST00000492367 MTMR14Q8NCE2 650 aa22.47■■□□□ 1.19
NUCB1-212ENST00000492367 AGXT2Q9BYV1 514 aa22.47■■□□□ 1.19
NUCB1-212ENST00000492367 ZBTB12Q9Y330 459 aaPredicted RBP22.47■■□□□ 1.19
NUCB1-212ENST00000492367 CYP2D7A0A087X1C5 515 aa22.46■■□□□ 1.19
NUCB1-212ENST00000492367 SOCS7O14512 581 aa22.46■■□□□ 1.19
NUCB1-212ENST00000492367 ORC4O43929 436 aa22.46■■□□□ 1.19
NUCB1-212ENST00000492367 WDHD1O75717 1129 aaPredicted RBP22.46■■□□□ 1.19
NUCB1-212ENST00000492367 PICALMQ13492 652 aa22.46■■□□□ 1.19
NUCB1-212ENST00000492367 TOB2Q14106 344 aaPredicted RBP22.46■■□□□ 1.19
NUCB1-212ENST00000492367 CHMP4CQ96CF2 233 aa22.46■■□□□ 1.19
NUCB1-212ENST00000492367 IDI2Q9BXS1 227 aa22.46■■□□□ 1.19
NUCB1-212ENST00000492367 KDM4AO75164 1064 aa22.45■■□□□ 1.18
NUCB1-212ENST00000492367 PRELPP51888 382 aa22.45■■□□□ 1.18
NUCB1-212ENST00000492367 CUL4AQ13619 759 aa22.45■■□□□ 1.18
NUCB1-212ENST00000492367 DPF2Q92785 391 aa22.45■■□□□ 1.18
NUCB1-212ENST00000492367 INTS4Q96HW7 963 aaKnown RBP22.45■■□□□ 1.18
NUCB1-212ENST00000492367 SAP30BPQ9UHR5 308 aaKnown RBP22.45■■□□□ 1.18
NUCB1-212ENST00000492367 ERICH2A1L162 156 aa22.44■■□□□ 1.18
NUCB1-212ENST00000492367 SPDYE2BA6NHP3 402 aa22.44■■□□□ 1.18
NUCB1-212ENST00000492367 MYO1BO43795 1136 aa22.44■■□□□ 1.18
NUCB1-212ENST00000492367 HLA-DOAP06340 250 aa22.44■■□□□ 1.18
NUCB1-212ENST00000492367 SPDYE6P0CI01 402 aa22.44■■□□□ 1.18
NUCB1-212ENST00000492367 CYP2D6P10635 497 aa22.44■■□□□ 1.18
NUCB1-212ENST00000492367 BRF1Q92994 677 aa22.44■■□□□ 1.18
NUCB1-212ENST00000492367 OSBPL5Q9H0X9 879 aaPredicted RBP22.44■■□□□ 1.18
NUCB1-212ENST00000492367 TAOK2Q9UL54 1235 aa22.44■■□□□ 1.18
NUCB1-212ENST00000492367 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.44■■□□□ 1.18
NUCB1-212ENST00000492367 ANTXR2P58335 489 aa22.43■■□□□ 1.18
NUCB1-212ENST00000492367 DHX36Q9H2U1 1008 aaKnown RBP22.43■■□□□ 1.18
NUCB1-212ENST00000492367 GJA3Q9Y6H8 435 aa22.43■■□□□ 1.18
NUCB1-212ENST00000492367 COL2A1P02458 1487 aaPredicted RBP22.43■■□□□ 1.18
NUCB1-212ENST00000492367 ENTPD3O75355 529 aa22.42■■□□□ 1.18
NUCB1-212ENST00000492367 YBX3P16989 372 aaKnown RBP eCLIP22.42■■□□□ 1.185e-9■■□□□ 11.5
NUCB1-212ENST00000492367 COL9A3Q14050 684 aaPredicted RBP22.42■■□□□ 1.18
NUCB1-212ENST00000492367 CYB5R4Q7L1T6 521 aa22.42■■□□□ 1.18
NUCB1-212ENST00000492367 CHST3Q7LGC8 479 aa22.42■■□□□ 1.18
NUCB1-212ENST00000492367 STK11IPQ8N1F8 1099 aa22.42■■□□□ 1.18
NUCB1-212ENST00000492367 SPRYD3Q8NCJ5 442 aa22.42■■□□□ 1.18
NUCB1-212ENST00000492367 LRRC2Q9BYS8 371 aa22.42■■□□□ 1.18
NUCB1-212ENST00000492367 TPCN1Q9ULQ1 816 aa22.42■■□□□ 1.18
NUCB1-212ENST00000492367 ANGEL1Q9UNK9 670 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms