RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 FZD9O00144 591 aa24.73■■□□□ 1.55
SND1-214ENST00000489417 YBX3P16989 372 aaKnown RBP eCLIP24.73■■□□□ 1.553e-11■□□□□ 8.5
SND1-214ENST00000489417 LMNB1P20700 586 aa24.73■■□□□ 1.55
SND1-214ENST00000489417 EIF6P56537 245 aaKnown RBP24.73■■□□□ 1.55
SND1-214ENST00000489417 TRDNQ13061 729 aa24.73■■□□□ 1.55
SND1-214ENST00000489417 CDC42EP5Q6NZY7 148 aa24.73■■□□□ 1.55
SND1-214ENST00000489417 MAPKAPK5Q8IW41 473 aa24.73■■□□□ 1.55
SND1-214ENST00000489417 STAG1Q8WVM7 1258 aa24.73■■□□□ 1.55
SND1-214ENST00000489417 BAZ2AQ9UIF9 1905 aaKnown RBP24.73■■□□□ 1.55
SND1-214ENST00000489417 CDK5RAP2Q96SN8 1893 aa24.73■■□□□ 1.55
SND1-214ENST00000489417 CYP2D7A0A087X1C5 515 aa24.72■■□□□ 1.55
SND1-214ENST00000489417 CFAP100Q494V2 611 aa24.72■■□□□ 1.55
SND1-214ENST00000489417 MB21D2Q8IYB1 491 aaPredicted RBP24.72■■□□□ 1.55
SND1-214ENST00000489417 TCEANC2Q96MN5 208 aa24.72■■□□□ 1.55
SND1-214ENST00000489417 RNF41Q9H4P4 317 aaPredicted RBP24.72■■□□□ 1.55
SND1-214ENST00000489417 FLT1P17948 1338 aa24.72■■□□□ 1.55
SND1-214ENST00000489417 USP17L8P0C7I0 530 aa24.71■■□□□ 1.55
SND1-214ENST00000489417 EXOSC10Q01780 885 aaKnown RBP24.71■■□□□ 1.55
SND1-214ENST00000489417 MFSD6Q6ZSS7 791 aa24.71■■□□□ 1.55
SND1-214ENST00000489417 NOL8Q76FK4 1167 aaKnown RBP24.71■■□□□ 1.55
SND1-214ENST00000489417 AMOTL1Q8IY63 956 aa24.71■■□□□ 1.55
SND1-214ENST00000489417 CNNM2Q9H8M5 875 aa24.71■■□□□ 1.55
SND1-214ENST00000489417 PCDHAC2Q9Y5I4 1007 aa24.71■■□□□ 1.55
SND1-214ENST00000489417 NEDD4P46934 1319 aa24.71■■□□□ 1.55
SND1-214ENST00000489417 DDX60LQ5H9U9 1706 aaKnown RBP24.71■■□□□ 1.55
SND1-214ENST00000489417 CYP2D6P10635 497 aa24.7■■□□□ 1.55
SND1-214ENST00000489417 ANKRD1Q15327 319 aa24.7■■□□□ 1.55
SND1-214ENST00000489417 OGFOD1Q8N543 542 aa24.7■■□□□ 1.55
SND1-214ENST00000489417 TACC3Q9Y6A5 838 aa24.7■■□□□ 1.55
SND1-214ENST00000489417 FOCADQ5VW36 1801 aa24.7■■□□□ 1.55
SND1-214ENST00000489417 WDHD1O75717 1129 aaPredicted RBP24.69■■□□□ 1.54
SND1-214ENST00000489417 RPS12P25398 132 aaKnown RBP24.69■■□□□ 1.54
SND1-214ENST00000489417 C12orf60Q5U649 245 aa24.69■■□□□ 1.54
SND1-214ENST00000489417 KRT23Q9C075 422 aa24.69■■□□□ 1.54
SND1-214ENST00000489417 SLC3A2P08195 630 aaKnown RBP24.69■■□□□ 1.54
SND1-214ENST00000489417 MCM5P33992 734 aa24.69■■□□□ 1.54
SND1-214ENST00000489417 Q6ZUG5 572 aa24.69■■□□□ 1.54
SND1-214ENST00000489417 INCENPQ9NQS7 918 aa24.69■■□□□ 1.54
SND1-214ENST00000489417 SAP30BPQ9UHR5 308 aaKnown RBP24.69■■□□□ 1.54
SND1-214ENST00000489417 LIMCH1Q9UPQ0 1083 aa24.69■■□□□ 1.54
SND1-214ENST00000489417 WDR19Q8NEZ3 1342 aa24.68■■□□□ 1.54
SND1-214ENST00000489417 ECM29Q5VYK3 1845 aa24.68■■□□□ 1.54
SND1-214ENST00000489417 B4E1Z4 1266 aa24.68■■□□□ 1.54
SND1-214ENST00000489417 SMIM22K7EJ46 135 aa24.68■■□□□ 1.54
SND1-214ENST00000489417 PRC1O43663 620 aa24.68■■□□□ 1.54
SND1-214ENST00000489417 POLR3DP05423 398 aaPredicted RBP24.68■■□□□ 1.54
SND1-214ENST00000489417 PCP11498 1178 aaKnown RBP24.68■■□□□ 1.54
SND1-214ENST00000489417 TOB2Q14106 344 aaPredicted RBP24.68■■□□□ 1.54
SND1-214ENST00000489417 STK11IPQ8N1F8 1099 aa24.68■■□□□ 1.54
SND1-214ENST00000489417 TMX3Q96JJ7 454 aa24.68■■□□□ 1.54
SND1-214ENST00000489417 ZNF541Q9H0D2 1346 aa24.68■■□□□ 1.54
SND1-214ENST00000489417 DICER1Q9UPY3 1922 aaKnown RBP24.67■■□□□ 1.54
SND1-214ENST00000489417 MMP14P50281 582 aa24.67■■□□□ 1.54
SND1-214ENST00000489417 EVX2Q03828 476 aa24.67■■□□□ 1.54
SND1-214ENST00000489417 PICALMQ13492 652 aa24.67■■□□□ 1.54
SND1-214ENST00000489417 DLGAP5Q15398 846 aa24.67■■□□□ 1.54
SND1-214ENST00000489417 LRRC2Q9BYS8 371 aa24.67■■□□□ 1.54
SND1-214ENST00000489417 DDX4Q9NQI0 724 aaKnown RBP24.67■■□□□ 1.54
SND1-214ENST00000489417 TOMM22Q9NS69 142 aa24.67■■□□□ 1.54
SND1-214ENST00000489417 ROBO3Q96MS0 1386 aa24.67■■□□□ 1.54
SND1-214ENST00000489417 SPDYE2BA6NHP3 402 aa24.66■■□□□ 1.54
SND1-214ENST00000489417 FGRP09769 529 aa24.66■■□□□ 1.54
SND1-214ENST00000489417 SPDYE6P0CI01 402 aa24.66■■□□□ 1.54
SND1-214ENST00000489417 ANTXR2P58335 489 aa24.66■■□□□ 1.54
SND1-214ENST00000489417 FGD1P98174 961 aa24.66■■□□□ 1.54
SND1-214ENST00000489417 RRP12Q5JTH9 1297 aaKnown RBP24.66■■□□□ 1.54
SND1-214ENST00000489417 CHST3Q7LGC8 479 aa24.66■■□□□ 1.54
SND1-214ENST00000489417 PRMT6Q96LA8 375 aaPredicted RBP24.66■■□□□ 1.54
SND1-214ENST00000489417 ZSCAN31Q96LW9 406 aaPredicted RBP24.66■■□□□ 1.54
SND1-214ENST00000489417 LARP6Q9BRS8 491 aaKnown RBP24.66■■□□□ 1.54
SND1-214ENST00000489417 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.66■■□□□ 1.54
SND1-214ENST00000489417 GJA3Q9Y6H8 435 aa24.66■■□□□ 1.54
SND1-214ENST00000489417 GMPSP49915 693 aaPredicted RBP24.65■■□□□ 1.54
SND1-214ENST00000489417 SLC4A8Q2Y0W8 1093 aa24.65■■□□□ 1.54
SND1-214ENST00000489417 CYB5R4Q7L1T6 521 aa24.65■■□□□ 1.54
SND1-214ENST00000489417 MTMR14Q8NCE2 650 aa24.65■■□□□ 1.54
SND1-214ENST00000489417 SPRYD3Q8NCJ5 442 aa24.65■■□□□ 1.54
SND1-214ENST00000489417 NKX2-3Q8TAU0 364 aa24.65■■□□□ 1.54
SND1-214ENST00000489417 IDI2Q9BXS1 227 aa24.65■■□□□ 1.54
SND1-214ENST00000489417 AGXT2Q9BYV1 514 aa24.65■■□□□ 1.54
SND1-214ENST00000489417 TDRD3Q9H7E2 651 aaKnown RBP24.65■■□□□ 1.54
SND1-214ENST00000489417 SBF1O95248 1867 aa24.65■■□□□ 1.54
SND1-214ENST00000489417 ORC4O43929 436 aa24.64■■□□□ 1.54
SND1-214ENST00000489417 KDM4AO75164 1064 aa24.64■■□□□ 1.54
SND1-214ENST00000489417 HSP90AA1P07900 732 aaKnown RBP24.64■■□□□ 1.54
SND1-214ENST00000489417 FBXL16Q8N461 479 aa24.64■■□□□ 1.54
SND1-214ENST00000489417 DPF2Q92785 391 aa24.64■■□□□ 1.54
SND1-214ENST00000489417 OSBPL5Q9H0X9 879 aaPredicted RBP24.64■■□□□ 1.54
SND1-214ENST00000489417 NPM3O75607 178 aaKnown RBP24.63■■□□□ 1.53
SND1-214ENST00000489417 ZNF280AP59817 542 aaPredicted RBP24.63■■□□□ 1.53
SND1-214ENST00000489417 PDE4BQ07343 736 aa24.63■■□□□ 1.53
SND1-214ENST00000489417 NFIAQ12857 509 aa24.63■■□□□ 1.53
SND1-214ENST00000489417 ESR2Q92731 530 aa24.63■■□□□ 1.53
SND1-214ENST00000489417 BRF1Q92994 677 aa24.63■■□□□ 1.53
SND1-214ENST00000489417 RNF181Q9P0P0 153 aa24.63■■□□□ 1.53
SND1-214ENST00000489417 TPCN1Q9ULQ1 816 aa24.63■■□□□ 1.53
SND1-214ENST00000489417 MYH1P12882 1939 aa24.63■■□□□ 1.53
SND1-214ENST00000489417 PLCD1P51178 756 aa24.62■■□□□ 1.53
SND1-214ENST00000489417 CACNB3P54284 484 aa24.62■■□□□ 1.53
SND1-214ENST00000489417 CUL4AQ13619 759 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms