RNA–Protein interactions for RNA: ENST00000489274.1

NINJ1-204, Transcript of ninjurin 1, humanhuman

TSL 2

Gene NINJ1, Length 2,026 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-204ENST00000489274 CCDC173Q0VFZ6 552 aa17■□□□□ 0.31
NINJ1-204ENST00000489274 WTAPQ15007 396 aa17■□□□□ 0.31
NINJ1-204ENST00000489274 NTRK3Q16288 839 aa17■□□□□ 0.31
NINJ1-204ENST00000489274 RRP12Q5JTH9 1297 aaKnown RBP17■□□□□ 0.31
NINJ1-204ENST00000489274 TMC4Q7Z404 712 aa17■□□□□ 0.31
NINJ1-204ENST00000489274 AKT1S1Q96B36 256 aa17■□□□□ 0.31
NINJ1-204ENST00000489274 PODXL2Q9NZ53 605 aa17■□□□□ 0.31
NINJ1-204ENST00000489274 ERICH2A1L162 156 aa16.99■□□□□ 0.31
NINJ1-204ENST00000489274 GOLGA8AA7E2F4 631 aa16.99■□□□□ 0.31
NINJ1-204ENST00000489274 GUCY1B3Q02153 619 aa16.99■□□□□ 0.31
NINJ1-204ENST00000489274 CTR9Q6PD62 1173 aa16.99■□□□□ 0.31
NINJ1-204ENST00000489274 MICU3Q86XE3 530 aa16.99■□□□□ 0.31
NINJ1-204ENST00000489274 NLGN1Q8N2Q7 840 aa16.99■□□□□ 0.31
NINJ1-204ENST00000489274 PGBD1Q96JS3 809 aa16.99■□□□□ 0.31
NINJ1-204ENST00000489274 TOMM22Q9NS69 142 aa16.99■□□□□ 0.31
NINJ1-204ENST00000489274 STK36Q9NRP7 1315 aa16.98■□□□□ 0.31
NINJ1-204ENST00000489274 CHD4Q14839 1912 aa16.98■□□□□ 0.31
NINJ1-204ENST00000489274 LDHBP07195 334 aaKnown RBP16.98■□□□□ 0.31
NINJ1-204ENST00000489274 SBK1Q52WX2 424 aa16.98■□□□□ 0.31
NINJ1-204ENST00000489274 BRAPQ7Z569 592 aa16.98■□□□□ 0.31
NINJ1-204ENST00000489274 FLAD1Q8NFF5 587 aa16.98■□□□□ 0.31
NINJ1-204ENST00000489274 AATFQ9NY61 560 aaKnown RBP eCLIP16.98■□□□□ 0.31
NINJ1-204ENST00000489274 GGA1Q9UJY5 639 aa16.98■□□□□ 0.31
NINJ1-204ENST00000489274 LIG1P18858 919 aa16.97■□□□□ 0.31
NINJ1-204ENST00000489274 IARSP41252 1262 aaKnown RBP16.97■□□□□ 0.31
NINJ1-204ENST00000489274 GSTO1P78417 241 aa16.97■□□□□ 0.31
NINJ1-204ENST00000489274 SEC23AQ15436 765 aa16.97■□□□□ 0.31
NINJ1-204ENST00000489274 TPRNQ4KMQ1 711 aa16.97■□□□□ 0.31
NINJ1-204ENST00000489274 SLC51AQ86UW1 340 aa16.97■□□□□ 0.31
NINJ1-204ENST00000489274 DZIP1Q86YF9 867 aaKnown RBP16.97■□□□□ 0.31
NINJ1-204ENST00000489274 USP28Q96RU2 1077 aa16.97■□□□□ 0.31
NINJ1-204ENST00000489274 UBAC1Q9BSL1 405 aa16.97■□□□□ 0.31
NINJ1-204ENST00000489274 DCP1AQ9NPI6 582 aaPredicted RBP16.97■□□□□ 0.31
NINJ1-204ENST00000489274 MAST2Q6P0Q8 1798 aa16.97■□□□□ 0.31
NINJ1-204ENST00000489274 MYH13Q9UKX3 1938 aa16.97■□□□□ 0.31
NINJ1-204ENST00000489274 USP17L12C9JPN9 530 aa16.97■□□□□ 0.31
NINJ1-204ENST00000489274 USP17L21D6R901 530 aa16.97■□□□□ 0.31
NINJ1-204ENST00000489274 UFL1O94874 794 aa16.97■□□□□ 0.31
NINJ1-204ENST00000489274 APBA3O96018 575 aa16.97■□□□□ 0.31
NINJ1-204ENST00000489274 IL1R1P14778 569 aa16.97■□□□□ 0.31
NINJ1-204ENST00000489274 IFNAR1P17181 557 aa16.97■□□□□ 0.31
NINJ1-204ENST00000489274 RXRAP19793 462 aa16.97■□□□□ 0.31
NINJ1-204ENST00000489274 PPP2R5BQ15173 497 aa16.97■□□□□ 0.31
NINJ1-204ENST00000489274 ZNF827Q17R98 1081 aa16.97■□□□□ 0.31
NINJ1-204ENST00000489274 OTUD7BQ6GQQ9 843 aa16.97■□□□□ 0.31
NINJ1-204ENST00000489274 ALG1Q9BT22 464 aa16.97■□□□□ 0.31
NINJ1-204ENST00000489274 FUCA2Q9BTY2 467 aa16.97■□□□□ 0.31
NINJ1-204ENST00000489274 CD209Q9NNX6 404 aa16.97■□□□□ 0.31
NINJ1-204ENST00000489274 DDX19AQ9NUU7 478 aaKnown RBP16.97■□□□□ 0.31
NINJ1-204ENST00000489274 RTEL1Q9NZ71 1219 aa16.97■□□□□ 0.31
NINJ1-204ENST00000489274 CCDC196A0A1B0GTZ2 297 aa16.96■□□□□ 0.31
NINJ1-204ENST00000489274 ORC4O43929 436 aa16.96■□□□□ 0.31
NINJ1-204ENST00000489274 PPP4CP60510 307 aa16.96■□□□□ 0.31
NINJ1-204ENST00000489274 COL23A1Q86Y22 540 aaPredicted RBP16.96■□□□□ 0.31
NINJ1-204ENST00000489274 SP8Q8IXZ3 490 aa16.96■□□□□ 0.31
NINJ1-204ENST00000489274 ZKSCAN3Q9BRR0 538 aa16.96■□□□□ 0.31
NINJ1-204ENST00000489274 ARPP21Q9UBL0 812 aaPredicted RBP16.96■□□□□ 0.31
NINJ1-204ENST00000489274 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.96■□□□□ 0.31
NINJ1-204ENST00000489274 FMNL1O95466 1100 aaPredicted RBP16.96■□□□□ 0.3
NINJ1-204ENST00000489274 NT5C2P49902 561 aa16.96■□□□□ 0.3
NINJ1-204ENST00000489274 KIF23Q02241 960 aaPredicted RBP16.96■□□□□ 0.3
NINJ1-204ENST00000489274 SSRP1Q08945 709 aaKnown RBP16.96■□□□□ 0.3
NINJ1-204ENST00000489274 UVSSAQ2YD98 709 aa16.96■□□□□ 0.3
NINJ1-204ENST00000489274 MYL10Q9BUA6 226 aa16.96■□□□□ 0.3
NINJ1-204ENST00000489274 JAG2Q9Y219 1238 aa16.96■□□□□ 0.3
NINJ1-204ENST00000489274 CYP2D7A0A087X1C5 515 aa16.95■□□□□ 0.3
NINJ1-204ENST00000489274 RANBP6O60518 1105 aaKnown RBP16.95■□□□□ 0.3
NINJ1-204ENST00000489274 LDHCP07864 332 aa16.95■□□□□ 0.3
NINJ1-204ENST00000489274 SLC3A2P08195 630 aaKnown RBP16.95■□□□□ 0.3
NINJ1-204ENST00000489274 RTN1Q16799 776 aa16.95■□□□□ 0.3
NINJ1-204ENST00000489274 CCDC144CPQ8IYA2 1237 aa16.95■□□□□ 0.3
NINJ1-204ENST00000489274 STK11IPQ8N1F8 1099 aa16.95■□□□□ 0.3
NINJ1-204ENST00000489274 WASF1Q92558 559 aa16.95■□□□□ 0.3
NINJ1-204ENST00000489274 PHKBQ93100 1093 aa16.95■□□□□ 0.3
NINJ1-204ENST00000489274 ZSCAN10Q96SZ4 725 aaPredicted RBP16.95■□□□□ 0.3
NINJ1-204ENST00000489274 NUP62CLQ9H1M0 184 aa16.95■□□□□ 0.3
NINJ1-204ENST00000489274 DACT1Q9NYF0 836 aa16.95■□□□□ 0.3
NINJ1-204ENST00000489274 TNKSO95271 1327 aa16.95■□□□□ 0.3
NINJ1-204ENST00000489274 SMIM22K7EJ46 135 aa16.94■□□□□ 0.3
NINJ1-204ENST00000489274 CERS3Q8IU89 383 aa16.94■□□□□ 0.3
NINJ1-204ENST00000489274 ZNF654Q8IZM8 581 aa16.94■□□□□ 0.3
NINJ1-204ENST00000489274 FANCBQ8NB91 859 aa16.94■□□□□ 0.3
NINJ1-204ENST00000489274 TBC1D16Q8TBP0 767 aa16.94■□□□□ 0.3
NINJ1-204ENST00000489274 BICD2Q8TD16 824 aa16.94■□□□□ 0.3
NINJ1-204ENST00000489274 BAG3O95817 575 aa16.94■□□□□ 0.3
NINJ1-204ENST00000489274 CEBPZQ03701 1054 aaKnown RBP16.94■□□□□ 0.3
NINJ1-204ENST00000489274 MYSM1Q5VVJ2 828 aa16.94■□□□□ 0.3
NINJ1-204ENST00000489274 KRT40Q6A162 431 aa16.94■□□□□ 0.3
NINJ1-204ENST00000489274 FAM43AQ8N2R8 423 aa16.94■□□□□ 0.3
NINJ1-204ENST00000489274 PDLIM2Q96JY6 352 aa16.94■□□□□ 0.3
NINJ1-204ENST00000489274 GPR101Q96P66 508 aaPredicted RBP16.94■□□□□ 0.3
NINJ1-204ENST00000489274 CLSTN2Q9H4D0 955 aa16.94■□□□□ 0.3
NINJ1-204ENST00000489274 POLR3EQ9NVU0 708 aa16.94■□□□□ 0.3
NINJ1-204ENST00000489274 POLLQ9UGP5 575 aa16.94■□□□□ 0.3
NINJ1-204ENST00000489274 MKRN1Q9UHC7 482 aaKnown RBP16.94■□□□□ 0.3
NINJ1-204ENST00000489274 DUOX1Q9NRD9 1551 aa16.93■□□□□ 0.3
NINJ1-204ENST00000489274 YEATS4O95619 227 aa16.93■□□□□ 0.3
NINJ1-204ENST00000489274 MAP3K11Q16584 847 aa16.93■□□□□ 0.3
NINJ1-204ENST00000489274 RBM43Q6ZSC3 357 aaKnown RBP16.93■□□□□ 0.3
NINJ1-204ENST00000489274 IQCA1Q86XH1 822 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms