RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 ZFPM1Q8IX07 1006 aa28.37■■■□□ 2.13
CUL4A-209ENST00000488558 HPS5Q9UPZ3 1129 aa28.37■■■□□ 2.13
CUL4A-209ENST00000488558 COL2A1P02458 1487 aaPredicted RBP28.37■■■□□ 2.13
CUL4A-209ENST00000488558 IRF6O14896 467 aa28.36■■■□□ 2.13
CUL4A-209ENST00000488558 RHBDL3P58872 404 aa28.36■■■□□ 2.13
CUL4A-209ENST00000488558 TBC1D9Q6ZT07 1266 aa28.36■■■□□ 2.13
CUL4A-209ENST00000488558 RAI14Q9P0K7 980 aa28.36■■■□□ 2.13
CUL4A-209ENST00000488558 MAP3K10Q02779 954 aa28.35■■■□□ 2.13
CUL4A-209ENST00000488558 ERO1AQ96HE7 468 aa28.35■■■□□ 2.13
CUL4A-209ENST00000488558 SH3BP5LQ7L8J4 393 aa28.34■■■□□ 2.13
CUL4A-209ENST00000488558 ERC1Q8IUD2 1116 aa28.34■■■□□ 2.13
CUL4A-209ENST00000488558 DDX4Q9NQI0 724 aaKnown RBP28.34■■■□□ 2.13
CUL4A-209ENST00000488558 LRP2BPQ9P2M1 347 aa28.34■■■□□ 2.13
CUL4A-209ENST00000488558 DBNLQ9UJU6 430 aaKnown RBP28.34■■■□□ 2.13
CUL4A-209ENST00000488558 DDX19BQ9UMR2 479 aa28.34■■■□□ 2.13
CUL4A-209ENST00000488558 TAF1CQ15572 869 aaPredicted RBP28.33■■■□□ 2.13
CUL4A-209ENST00000488558 FAM43AQ8N2R8 423 aa28.33■■■□□ 2.13
CUL4A-209ENST00000488558 ZFYVE28Q9HCC9 887 aa28.33■■■□□ 2.13
CUL4A-209ENST00000488558 RCAN3Q9UKA8 241 aa28.33■■■□□ 2.13
CUL4A-209ENST00000488558 KCNH4Q9UQ05 1017 aa28.33■■■□□ 2.13
CUL4A-209ENST00000488558 DOCK1Q14185 1865 aa28.33■■■□□ 2.13
CUL4A-209ENST00000488558 PICALMQ13492 652 aa28.32■■■□□ 2.12
CUL4A-209ENST00000488558 ZSCAN29Q8IWY8 852 aaPredicted RBP28.32■■■□□ 2.12
CUL4A-209ENST00000488558 DDTLA6NHG4 134 aaPredicted RBP28.31■■■□□ 2.12
CUL4A-209ENST00000488558 PHF20L1A8MW92 1017 aa28.31■■■□□ 2.12
CUL4A-209ENST00000488558 SP3Q02447 781 aa28.31■■■□□ 2.12
CUL4A-209ENST00000488558 HSP90AB4PQ58FF6 505 aa28.31■■■□□ 2.12
CUL4A-209ENST00000488558 EAF2Q96CJ1 260 aaPredicted RBP28.31■■■□□ 2.12
CUL4A-209ENST00000488558 MYO5AQ9Y4I1 1855 aaKnown RBP28.3■■■□□ 2.12
CUL4A-209ENST00000488558 FOCADQ5VW36 1801 aa28.3■■■□□ 2.12
CUL4A-209ENST00000488558 MLLT1Q03111 559 aaPredicted RBP28.3■■■□□ 2.12
CUL4A-209ENST00000488558 OTOP1Q7RTM1 612 aa28.3■■■□□ 2.12
CUL4A-209ENST00000488558 RPAP2Q8IXW5 612 aaPredicted RBP28.3■■■□□ 2.12
CUL4A-209ENST00000488558 CHMP4BQ9H444 224 aaKnown RBP28.3■■■□□ 2.12
CUL4A-209ENST00000488558 SNRKQ9NRH2 765 aa28.3■■■□□ 2.12
CUL4A-209ENST00000488558 BTBD19C9JJ37 291 aa28.29■■■□□ 2.12
CUL4A-209ENST00000488558 CYP2E1P05181 493 aaPredicted RBP28.29■■■□□ 2.12
CUL4A-209ENST00000488558 SCYL3Q8IZE3 742 aa28.29■■■□□ 2.12
CUL4A-209ENST00000488558 NOL10Q9BSC4 688 aaKnown RBP28.29■■■□□ 2.12
CUL4A-209ENST00000488558 TLR7Q9NYK1 1049 aaKnown RBP28.29■■■□□ 2.12
CUL4A-209ENST00000488558 EXOC6BQ9Y2D4 811 aa28.29■■■□□ 2.12
CUL4A-209ENST00000488558 TRIM17Q9Y577 477 aa28.29■■■□□ 2.12
CUL4A-209ENST00000488558 CDK5RAP2Q96SN8 1893 aa28.28■■■□□ 2.12
CUL4A-209ENST00000488558 NAA16Q6N069 864 aaPredicted RBP28.28■■■□□ 2.12
CUL4A-209ENST00000488558 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.28■■■□□ 2.12
CUL4A-209ENST00000488558 CD99L2Q8TCZ2 262 aa28.28■■■□□ 2.12
CUL4A-209ENST00000488558 CCDC8Q9H0W5 538 aaPredicted RBP28.28■■■□□ 2.12
CUL4A-209ENST00000488558 ZBTB40Q9NUA8 1239 aa28.28■■■□□ 2.12
CUL4A-209ENST00000488558 TBC1D12O60347 775 aa28.27■■■□□ 2.12
CUL4A-209ENST00000488558 ANKRD23Q86SG2 305 aa28.27■■■□□ 2.12
CUL4A-209ENST00000488558 OSBPL5Q9H0X9 879 aaPredicted RBP28.27■■■□□ 2.12
CUL4A-209ENST00000488558 COG6Q9Y2V7 657 aa28.27■■■□□ 2.12
CUL4A-209ENST00000488558 PHIPQ8WWQ0 1821 aa28.27■■■□□ 2.12
CUL4A-209ENST00000488558 CXCL11O14625 94 aa28.26■■■□□ 2.11
CUL4A-209ENST00000488558 TLR2O60603 784 aa28.26■■■□□ 2.11
CUL4A-209ENST00000488558 HMMRO75330 724 aa28.26■■■□□ 2.11
CUL4A-209ENST00000488558 BAG3O95817 575 aa28.26■■■□□ 2.11
CUL4A-209ENST00000488558 PLCG2P16885 1265 aa28.26■■■□□ 2.11
CUL4A-209ENST00000488558 ZAP70P43403 619 aa28.26■■■□□ 2.11
CUL4A-209ENST00000488558 CTNND1O60716 968 aaKnown RBP28.25■■■□□ 2.11
CUL4A-209ENST00000488558 PPP4CP60510 307 aa28.25■■■□□ 2.11
CUL4A-209ENST00000488558 TEX11Q8IYF3 940 aa28.25■■■□□ 2.11
CUL4A-209ENST00000488558 EFCC1Q9HA90 598 aa28.25■■■□□ 2.11
CUL4A-209ENST00000488558 PICK1Q9NRD5 415 aa28.25■■■□□ 2.11
CUL4A-209ENST00000488558 PTPRFP10586 1907 aa28.25■■■□□ 2.11
CUL4A-209ENST00000488558 SOX10P56693 466 aa28.24■■■□□ 2.11
CUL4A-209ENST00000488558 ARHGEF6Q15052 776 aa28.24■■■□□ 2.11
CUL4A-209ENST00000488558 TMED8Q6PL24 325 aaPredicted RBP28.24■■■□□ 2.11
CUL4A-209ENST00000488558 PTPRAP18433 802 aa28.23■■■□□ 2.11
CUL4A-209ENST00000488558 MOGSQ13724 837 aa28.23■■■□□ 2.11
CUL4A-209ENST00000488558 PDE3AQ14432 1141 aa28.23■■■□□ 2.11
CUL4A-209ENST00000488558 AACSQ86V21 672 aa28.23■■■□□ 2.11
CUL4A-209ENST00000488558 RHPN1Q8TCX5 695 aa28.23■■■□□ 2.11
CUL4A-209ENST00000488558 SH3RF3Q8TEJ3 882 aaPredicted RBP28.23■■■□□ 2.11
CUL4A-209ENST00000488558 PIH1D3Q9NQM4 214 aaKnown RBP28.23■■■□□ 2.11
CUL4A-209ENST00000488558 PTPN22Q9Y2R2 807 aa28.23■■■□□ 2.11
CUL4A-209ENST00000488558 SIPA1L1O43166 1804 aa28.22■■■□□ 2.11
CUL4A-209ENST00000488558 ATAD5Q96QE3 1844 aa28.22■■■□□ 2.11
CUL4A-209ENST00000488558 AATFQ9NY61 560 aaKnown RBP eCLIP28.22■■■□□ 2.111e-6■□□□□ 9.7
CUL4A-209ENST00000488558 ADGRA1Q86SQ6 560 aa28.21■■■□□ 2.11
CUL4A-209ENST00000488558 SIRT2Q8IXJ6 389 aa28.21■■■□□ 2.11
CUL4A-209ENST00000488558 KIF1BPQ96EK5 621 aa28.21■■■□□ 2.11
CUL4A-209ENST00000488558 DHX36Q9H2U1 1008 aaKnown RBP28.21■■■□□ 2.11
CUL4A-209ENST00000488558 ZHX2Q9Y6X8 837 aa28.21■■■□□ 2.11
CUL4A-209ENST00000488558 HTTP42858 3142 aa28.2■■■□□ 2.11
CUL4A-209ENST00000488558 A0A0G2JLL6 359 aaPredicted RBP28.2■■■□□ 2.1
CUL4A-209ENST00000488558 PDHXO00330 501 aa28.2■■■□□ 2.1
CUL4A-209ENST00000488558 PRRT2Q7Z6L0 340 aaPredicted RBP28.2■■■□□ 2.1
CUL4A-209ENST00000488558 CERS3Q8IU89 383 aa28.2■■■□□ 2.1
CUL4A-209ENST00000488558 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.2■■■□□ 2.1
CUL4A-209ENST00000488558 HERC5Q9UII4 1024 aaKnown RBP28.2■■■□□ 2.1
CUL4A-209ENST00000488558 AFG3L2Q9Y4W6 797 aa28.2■■■□□ 2.1
CUL4A-209ENST00000488558 ADGRA2Q96PE1 1338 aa28.19■■■□□ 2.1
CUL4A-209ENST00000488558 RBBP6Q7Z6E9 1792 aaKnown RBP28.19■■■□□ 2.1
CUL4A-209ENST00000488558 CAP1Q01518 475 aa28.19■■■□□ 2.1
CUL4A-209ENST00000488558 FASTKD5Q7L8L6 764 aaKnown RBP28.19■■■□□ 2.1
CUL4A-209ENST00000488558 CLASRPQ8N2M8 674 aaKnown RBP28.19■■■□□ 2.1
CUL4A-209ENST00000488558 SLURP2P0DP57 97 aa28.18■■■□□ 2.1
CUL4A-209ENST00000488558 C17orf99Q6UX52 265 aa28.18■■■□□ 2.1
CUL4A-209ENST00000488558 IL1RAPL2Q9NP60 686 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms