RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 SYNE3Q6ZMZ3 975 aa18.64■□□□□ 0.58
RAPGEF3-211ENST00000488250 KRT27Q7Z3Y8 459 aa18.64■□□□□ 0.58
RAPGEF3-211ENST00000488250 MICU3Q86XE3 530 aa18.64■□□□□ 0.58
RAPGEF3-211ENST00000488250 BICD2Q8TD16 824 aa18.64■□□□□ 0.58
RAPGEF3-211ENST00000488250 BRWD3Q6RI45 1802 aa18.64■□□□□ 0.58
RAPGEF3-211ENST00000488250 XDHP47989 1333 aa18.64■□□□□ 0.57
RAPGEF3-211ENST00000488250 ESPNB1AK53 854 aa18.64■□□□□ 0.57
RAPGEF3-211ENST00000488250 SPTY2D1Q68D10 685 aaPredicted RBP18.64■□□□□ 0.57
RAPGEF3-211ENST00000488250 ESR2Q92731 530 aa18.64■□□□□ 0.57
RAPGEF3-211ENST00000488250 IFNAR1P17181 557 aa18.63■□□□□ 0.57
RAPGEF3-211ENST00000488250 DYNLL1P63167 89 aaKnown RBP18.63■□□□□ 0.57
RAPGEF3-211ENST00000488250 KIF23Q02241 960 aaPredicted RBP18.63■□□□□ 0.57
RAPGEF3-211ENST00000488250 WTAPQ15007 396 aa18.63■□□□□ 0.57
RAPGEF3-211ENST00000488250 TXNRD3Q86VQ6 643 aa18.63■□□□□ 0.57
RAPGEF3-211ENST00000488250 TNMDQ9H2S6 317 aa18.63■□□□□ 0.57
RAPGEF3-211ENST00000488250 POLR3EQ9NVU0 708 aa18.63■□□□□ 0.57
RAPGEF3-211ENST00000488250 RGS17Q9UGC6 210 aaPredicted RBP18.63■□□□□ 0.57
RAPGEF3-211ENST00000488250 DUOX1Q9NRD9 1551 aa18.63■□□□□ 0.57
RAPGEF3-211ENST00000488250 ERICH2A1L162 156 aa18.62■□□□□ 0.57
RAPGEF3-211ENST00000488250 IARSP41252 1262 aaKnown RBP18.62■□□□□ 0.57
RAPGEF3-211ENST00000488250 OTUD7BQ6GQQ9 843 aa18.62■□□□□ 0.57
RAPGEF3-211ENST00000488250 ALG1Q9BT22 464 aa18.62■□□□□ 0.57
RAPGEF3-211ENST00000488250 MINDY4BA8MYZ0 360 aa18.62■□□□□ 0.57
RAPGEF3-211ENST00000488250 NR1I2O75469 434 aa18.62■□□□□ 0.57
RAPGEF3-211ENST00000488250 YEATS4O95619 227 aa18.62■□□□□ 0.57
RAPGEF3-211ENST00000488250 ST5P78524 1137 aa18.62■□□□□ 0.57
RAPGEF3-211ENST00000488250 PPP2R5BQ15173 497 aa18.62■□□□□ 0.57
RAPGEF3-211ENST00000488250 RRP12Q5JTH9 1297 aaKnown RBP18.62■□□□□ 0.57
RAPGEF3-211ENST00000488250 MYSM1Q5VVJ2 828 aa18.62■□□□□ 0.57
RAPGEF3-211ENST00000488250 TDRD7Q8NHU6 1098 aaKnown RBP18.62■□□□□ 0.57
RAPGEF3-211ENST00000488250 FTOQ9C0B1 505 aaKnown RBP eCLIP18.62■□□□□ 0.57
RAPGEF3-211ENST00000488250 ATP8A2Q9NTI2 1148 aa18.62■□□□□ 0.57
RAPGEF3-211ENST00000488250 ANKIB1Q9P2G1 1089 aa18.62■□□□□ 0.57
RAPGEF3-211ENST00000488250 RANBP6O60518 1105 aaKnown RBP18.61■□□□□ 0.57
RAPGEF3-211ENST00000488250 FMNL1O95466 1100 aaPredicted RBP18.61■□□□□ 0.57
RAPGEF3-211ENST00000488250 SERPINB2P05120 415 aa18.61■□□□□ 0.57
RAPGEF3-211ENST00000488250 RXRAP19793 462 aa18.61■□□□□ 0.57
RAPGEF3-211ENST00000488250 SEC23AQ15436 765 aa18.61■□□□□ 0.57
RAPGEF3-211ENST00000488250 WDR66Q8TBY9 1149 aa18.61■□□□□ 0.57
RAPGEF3-211ENST00000488250 CRNKL1Q9BZJ0 848 aaKnown RBP18.61■□□□□ 0.57
RAPGEF3-211ENST00000488250 TOMM22Q9NS69 142 aa18.61■□□□□ 0.57
RAPGEF3-211ENST00000488250 CCDC88AQ3V6T2 1871 aa18.61■□□□□ 0.57
RAPGEF3-211ENST00000488250 CCDC196A0A1B0GTZ2 297 aa18.61■□□□□ 0.57
RAPGEF3-211ENST00000488250 A0A1W2PQ27 194 aa18.61■□□□□ 0.57
RAPGEF3-211ENST00000488250 A0A1W2PQ64 194 aa18.61■□□□□ 0.57
RAPGEF3-211ENST00000488250 A0A1W2PQD8 194 aa18.61■□□□□ 0.57
RAPGEF3-211ENST00000488250 PRDX5P30044 214 aa18.61■□□□□ 0.57
RAPGEF3-211ENST00000488250 CLCN1P35523 988 aa18.61■□□□□ 0.57
RAPGEF3-211ENST00000488250 CEBPZQ03701 1054 aaKnown RBP18.61■□□□□ 0.57
RAPGEF3-211ENST00000488250 CTR9Q6PD62 1173 aa18.61■□□□□ 0.57
RAPGEF3-211ENST00000488250 LINC00301Q8NCQ3 95 aa18.61■□□□□ 0.57
RAPGEF3-211ENST00000488250 KCNG4Q8TDN1 519 aa18.61■□□□□ 0.57
RAPGEF3-211ENST00000488250 WASF1Q92558 559 aa18.61■□□□□ 0.57
RAPGEF3-211ENST00000488250 RPGRQ92834 1020 aaKnown RBP18.61■□□□□ 0.57
RAPGEF3-211ENST00000488250 UBAC1Q9BSL1 405 aa18.61■□□□□ 0.57
RAPGEF3-211ENST00000488250 HOXA10P31260 410 aaPredicted RBP18.6■□□□□ 0.57
RAPGEF3-211ENST00000488250 SSRP1Q08945 709 aaKnown RBP18.6■□□□□ 0.57
RAPGEF3-211ENST00000488250 CHAF1AQ13111 956 aaPredicted RBP18.6■□□□□ 0.57
RAPGEF3-211ENST00000488250 RTN1Q16799 776 aa18.6■□□□□ 0.57
RAPGEF3-211ENST00000488250 SBK1Q52WX2 424 aa18.6■□□□□ 0.57
RAPGEF3-211ENST00000488250 KRT40Q6A162 431 aa18.6■□□□□ 0.57
RAPGEF3-211ENST00000488250 CCAR1Q8IX12 1150 aaKnown RBP18.6■□□□□ 0.57
RAPGEF3-211ENST00000488250 PHKBQ93100 1093 aa18.6■□□□□ 0.57
RAPGEF3-211ENST00000488250 MYL10Q9BUA6 226 aa18.6■□□□□ 0.57
RAPGEF3-211ENST00000488250 ECM29Q5VYK3 1845 aa18.6■□□□□ 0.57
RAPGEF3-211ENST00000488250 KLRG2A4D1S0 409 aaPredicted RBP18.59■□□□□ 0.57
RAPGEF3-211ENST00000488250 KIF28PB7ZC32 967 aa18.59■□□□□ 0.57
RAPGEF3-211ENST00000488250 CTAGE5O15320 804 aa18.59■□□□□ 0.57
RAPGEF3-211ENST00000488250 NT5C2P49902 561 aa18.59■□□□□ 0.57
RAPGEF3-211ENST00000488250 ADALQ6DHV7 355 aa18.59■□□□□ 0.57
RAPGEF3-211ENST00000488250 ZNF804AQ7Z570 1209 aa18.59■□□□□ 0.57
RAPGEF3-211ENST00000488250 RBM17Q96I25 401 aaKnown RBP18.59■□□□□ 0.57
RAPGEF3-211ENST00000488250 DCP1AQ9NPI6 582 aaPredicted RBP18.59■□□□□ 0.57
RAPGEF3-211ENST00000488250 GJB4Q9NTQ9 266 aa18.59■□□□□ 0.57
RAPGEF3-211ENST00000488250 ORC4O43929 436 aa18.59■□□□□ 0.57
RAPGEF3-211ENST00000488250 TRIM37O94972 964 aa18.59■□□□□ 0.57
RAPGEF3-211ENST00000488250 RXRBP28702 533 aa18.59■□□□□ 0.57
RAPGEF3-211ENST00000488250 TYRO3Q06418 890 aa18.59■□□□□ 0.57
RAPGEF3-211ENST00000488250 CAMK4Q16566 473 aa18.59■□□□□ 0.57
RAPGEF3-211ENST00000488250 ZSCAN30Q86W11 494 aa18.59■□□□□ 0.57
RAPGEF3-211ENST00000488250 CCDC144CPQ8IYA2 1237 aa18.59■□□□□ 0.57
RAPGEF3-211ENST00000488250 ZNF654Q8IZM8 581 aa18.59■□□□□ 0.57
RAPGEF3-211ENST00000488250 ENGASEQ8NFI3 743 aa18.59■□□□□ 0.57
RAPGEF3-211ENST00000488250 ZKSCAN3Q9BRR0 538 aa18.59■□□□□ 0.57
RAPGEF3-211ENST00000488250 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.59■□□□□ 0.57
RAPGEF3-211ENST00000488250 BBOX1O75936 387 aa18.58■□□□□ 0.56
RAPGEF3-211ENST00000488250 TNKSO95271 1327 aa18.58■□□□□ 0.56
RAPGEF3-211ENST00000488250 POLR3DP05423 398 aaPredicted RBP18.58■□□□□ 0.56
RAPGEF3-211ENST00000488250 LAMB1P07942 1786 aa18.58■□□□□ 0.56
RAPGEF3-211ENST00000488250 U2AF2P26368 475 aaKnown RBP eCLIP18.58■□□□□ 0.56
RAPGEF3-211ENST00000488250 ME1P48163 572 aa18.58■□□□□ 0.56
RAPGEF3-211ENST00000488250 FAM160A1Q05DH4 1040 aa18.58■□□□□ 0.56
RAPGEF3-211ENST00000488250 SNW1Q13573 536 aaKnown RBP18.58■□□□□ 0.56
RAPGEF3-211ENST00000488250 CCDC73Q6ZRK6 1079 aa18.58■□□□□ 0.56
RAPGEF3-211ENST00000488250 NBPF11Q86T75 865 aa18.58■□□□□ 0.56
RAPGEF3-211ENST00000488250 FANCBQ8NB91 859 aa18.58■□□□□ 0.56
RAPGEF3-211ENST00000488250 AIFM3Q96NN9 605 aa18.58■□□□□ 0.56
RAPGEF3-211ENST00000488250 ZSCAN10Q96SZ4 725 aaPredicted RBP18.58■□□□□ 0.56
RAPGEF3-211ENST00000488250 AATFQ9NY61 560 aaKnown RBP eCLIP18.58■□□□□ 0.56
RAPGEF3-211ENST00000488250 ARPP21Q9UBL0 812 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms