RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 TLR6Q9Y2C9 796 aa8.78□□□□□ -1
CUL3-211ENST00000487558 STK10O94804 968 aaKnown RBP8.77□□□□□ -1.01
CUL3-211ENST00000487558 RBL2Q08999 1139 aa8.77□□□□□ -1.01
CUL3-211ENST00000487558 SNAP47Q5SQN1 464 aa8.77□□□□□ -1.01
CUL3-211ENST00000487558 FBXL19Q6PCT2 694 aa8.77□□□□□ -1.01
CUL3-211ENST00000487558 MCF2L2Q86YR7 1114 aa8.77□□□□□ -1.01
CUL3-211ENST00000487558 TRIM42Q8IWZ5 723 aa8.77□□□□□ -1.01
CUL3-211ENST00000487558 WNT8BQ93098 351 aa8.77□□□□□ -1.01
CUL3-211ENST00000487558 GOLGA2P5Q9HBQ8 144 aa8.77□□□□□ -1.01
CUL3-211ENST00000487558 HMX2A2RU54 273 aa8.76□□□□□ -1.01
CUL3-211ENST00000487558 H3BRJ5 948 aa8.76□□□□□ -1.01
CUL3-211ENST00000487558 GREM1O60565 184 aa8.76□□□□□ -1.01
CUL3-211ENST00000487558 FGRP09769 529 aa8.76□□□□□ -1.01
CUL3-211ENST00000487558 ZNF157P51786 506 aaPredicted RBP8.76□□□□□ -1.01
CUL3-211ENST00000487558 CABP4P57796 275 aa8.76□□□□□ -1.01
CUL3-211ENST00000487558 FAM160A1Q05DH4 1040 aa8.76□□□□□ -1.01
CUL3-211ENST00000487558 COL9A2Q14055 689 aaPredicted RBP8.76□□□□□ -1.01
CUL3-211ENST00000487558 PCNX4Q63HM2 1172 aa8.76□□□□□ -1.01
CUL3-211ENST00000487558 DPH6Q7L8W6 267 aa8.76□□□□□ -1.01
CUL3-211ENST00000487558 GOLM1Q8NBJ4 401 aa8.76□□□□□ -1.01
CUL3-211ENST00000487558 EAF1Q96JC9 268 aaPredicted RBP8.76□□□□□ -1.01
CUL3-211ENST00000487558 SOX13Q9UN79 622 aa8.76□□□□□ -1.01
CUL3-211ENST00000487558 CYP8B1Q9UNU6 501 aa8.76□□□□□ -1.01
CUL3-211ENST00000487558 ROBO2Q9HCK4 1378 aa8.75□□□□□ -1.01
CUL3-211ENST00000487558 PRR19A6NJB7 356 aa8.75□□□□□ -1.01
CUL3-211ENST00000487558 PAGE1O75459 146 aa8.75□□□□□ -1.01
CUL3-211ENST00000487558 B3GALT4O96024 378 aa8.75□□□□□ -1.01
CUL3-211ENST00000487558 SSBP05455 408 aaKnown RBP eCLIP8.75□□□□□ -1.01
CUL3-211ENST00000487558 NME2P22392 152 aa8.75□□□□□ -1.01
CUL3-211ENST00000487558 PIP4K2BP78356 416 aa8.75□□□□□ -1.01
CUL3-211ENST00000487558 LRRC14Q15048 493 aa8.75□□□□□ -1.01
CUL3-211ENST00000487558 VN1R5Q7Z5H4 357 aa8.75□□□□□ -1.01
CUL3-211ENST00000487558 CCDC84Q86UT8 332 aaPredicted RBP8.75□□□□□ -1.01
CUL3-211ENST00000487558 CLEC10AQ8IUN9 316 aa8.75□□□□□ -1.01
CUL3-211ENST00000487558 FAM20CQ8IXL6 584 aa8.75□□□□□ -1.01
CUL3-211ENST00000487558 DBNDD2Q9BQY9 259 aa8.75□□□□□ -1.01
CUL3-211ENST00000487558 OSGEPQ9NPF4 335 aa8.75□□□□□ -1.01
CUL3-211ENST00000487558 OAS3Q9Y6K5 1087 aaKnown RBP8.75□□□□□ -1.01
CUL3-211ENST00000487558 ADAMTS4O75173 837 aa8.74□□□□□ -1.01
CUL3-211ENST00000487558 TFE3P19532 575 aaPredicted RBP8.74□□□□□ -1.01
CUL3-211ENST00000487558 SPINK2P20155 84 aa8.74□□□□□ -1.01
CUL3-211ENST00000487558 GARTP22102 1010 aa8.74□□□□□ -1.01
CUL3-211ENST00000487558 ZNF423Q2M1K9 1284 aa8.74□□□□□ -1.01
CUL3-211ENST00000487558 INTS5Q6P9B9 1019 aaKnown RBP8.74□□□□□ -1.01
CUL3-211ENST00000487558 FAM83CQ9BQN1 747 aa8.74□□□□□ -1.01
CUL3-211ENST00000487558 EMILIN2Q9BXX0 1053 aa8.74□□□□□ -1.01
CUL3-211ENST00000487558 MIR1-1HGQ9H1L0 117 aa8.74□□□□□ -1.01
CUL3-211ENST00000487558 EFR3BQ9Y2G0 817 aa8.74□□□□□ -1.01
CUL3-211ENST00000487558 EIF4EBP3O60516 100 aaPredicted RBP8.73□□□□□ -1.01
CUL3-211ENST00000487558 BMP6P22004 513 aa8.73□□□□□ -1.01
CUL3-211ENST00000487558 NASPP49321 788 aaPredicted RBP8.73□□□□□ -1.01
CUL3-211ENST00000487558 GP2P55259 537 aaKnown RBP8.73□□□□□ -1.01
CUL3-211ENST00000487558 APOBRQ0VD83 1088 aa8.73□□□□□ -1.01
CUL3-211ENST00000487558 IKBKEQ14164 716 aa8.73□□□□□ -1.01
CUL3-211ENST00000487558 ANKRD34AQ69YU3 496 aa8.73□□□□□ -1.01
CUL3-211ENST00000487558 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.73□□□□□ -1.01
CUL3-211ENST00000487558 NKD1Q969G9 470 aa8.73□□□□□ -1.01
CUL3-211ENST00000487558 LNPKQ9C0E8 428 aa8.73□□□□□ -1.01
CUL3-211ENST00000487558 STRIP2Q9ULQ0 834 aa8.73□□□□□ -1.01
CUL3-211ENST00000487558 ESRRAP11474 423 aaPredicted RBP8.72□□□□□ -1.01
CUL3-211ENST00000487558 ARNTP27540 789 aa8.72□□□□□ -1.01
CUL3-211ENST00000487558 PREPP48147 710 aa8.72□□□□□ -1.01
CUL3-211ENST00000487558 FAM196AQ6ZSG2 479 aa8.72□□□□□ -1.01
CUL3-211ENST00000487558 KRTAP9-9Q9BYP9 154 aa8.72□□□□□ -1.01
CUL3-211ENST00000487558 KRTAP9-4Q9BYQ2 154 aa8.72□□□□□ -1.01
CUL3-211ENST00000487558 GINM1Q9NU53 330 aa8.72□□□□□ -1.01
CUL3-211ENST00000487558 UBP1Q9NZI7 540 aa8.72□□□□□ -1.01
CUL3-211ENST00000487558 BMP3P12645 472 aa8.71□□□□□ -1.02
CUL3-211ENST00000487558 SOX9P48436 509 aa8.71□□□□□ -1.02
CUL3-211ENST00000487558 IRAK1P51617 712 aa8.71□□□□□ -1.02
CUL3-211ENST00000487558 DTX1Q86Y01 620 aa8.71□□□□□ -1.02
CUL3-211ENST00000487558 SULF2Q8IWU5 870 aa8.71□□□□□ -1.02
CUL3-211ENST00000487558 PMFBP1Q8TBY8 1022 aa8.71□□□□□ -1.02
CUL3-211ENST00000487558 CPLX3Q8WVH0 158 aa8.71□□□□□ -1.02
CUL3-211ENST00000487558 JARID2Q92833 1246 aaPredicted RBP8.71□□□□□ -1.02
CUL3-211ENST00000487558 FMNL2Q96PY5 1086 aa8.71□□□□□ -1.02
CUL3-211ENST00000487558 RNF208Q9H0X6 261 aa8.71□□□□□ -1.02
CUL3-211ENST00000487558 CBX8Q9HC52 389 aa8.71□□□□□ -1.02
CUL3-211ENST00000487558 MEGF11A6BM72 1044 aa8.7□□□□□ -1.02
CUL3-211ENST00000487558 PAX4O43316 350 aa8.7□□□□□ -1.02
CUL3-211ENST00000487558 GRIK1P39086 918 aa8.7□□□□□ -1.02
CUL3-211ENST00000487558 ARL4DP49703 201 aa8.7□□□□□ -1.02
CUL3-211ENST00000487558 NLRP12P59046 1061 aa8.7□□□□□ -1.02
CUL3-211ENST00000487558 SCARA3Q6AZY7 606 aa8.7□□□□□ -1.02
CUL3-211ENST00000487558 LLGL2Q6P1M3 1020 aa8.7□□□□□ -1.02
CUL3-211ENST00000487558 BEND4Q6ZU67 534 aa8.7□□□□□ -1.02
CUL3-211ENST00000487558 NOP9Q86U38 636 aaKnown RBP8.7□□□□□ -1.02
CUL3-211ENST00000487558 SLITRK4Q8IW52 837 aa8.7□□□□□ -1.02
CUL3-211ENST00000487558 CKAP2LQ8IYA6 745 aa8.7□□□□□ -1.02
CUL3-211ENST00000487558 GATAD2BQ8WXI9 593 aa8.7□□□□□ -1.02
CUL3-211ENST00000487558 PCDHB5Q9Y5E4 795 aa8.7□□□□□ -1.02
CUL3-211ENST00000487558 SART1O43290 800 aaKnown RBP8.69□□□□□ -1.02
CUL3-211ENST00000487558 AP3B2Q13367 1082 aa8.69□□□□□ -1.02
CUL3-211ENST00000487558 CCDC144BQ3MJ40 725 aa8.69□□□□□ -1.02
CUL3-211ENST00000487558 HGSNATQ68CP4 663 aa8.69□□□□□ -1.02
CUL3-211ENST00000487558 SOX17Q9H6I2 414 aaPredicted RBP8.69□□□□□ -1.02
CUL3-211ENST00000487558 HIF3AQ9Y2N7 669 aa8.69□□□□□ -1.02
CUL3-211ENST00000487558 SOX1O00570 391 aaPredicted RBP8.68□□□□□ -1.02
CUL3-211ENST00000487558 F13A1P00488 732 aa8.68□□□□□ -1.02
CUL3-211ENST00000487558 CANXP27824 592 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms