RNA–Protein interactions for RNA: ENST00000487109.5

ABCA2-218, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 8,031 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-218ENST00000487109 HARSP12081 509 aaKnown RBP13.8□□□□□ -0.2
ABCA2-218ENST00000487109 NUCB1Q02818 461 aa13.8□□□□□ -0.2
ABCA2-218ENST00000487109 CDAN1Q8IWY9 1227 aa13.8□□□□□ -0.2
ABCA2-218ENST00000487109 LIN9Q5TKA1 542 aa13.8□□□□□ -0.2
ABCA2-218ENST00000487109 RBM17Q96I25 401 aaKnown RBP13.8□□□□□ -0.2
ABCA2-218ENST00000487109 ACTN4O43707 911 aaKnown RBP13.79□□□□□ -0.2
ABCA2-218ENST00000487109 IRX3P78415 501 aaPredicted RBP13.79□□□□□ -0.2
ABCA2-218ENST00000487109 MUM1L1Q5H9M0 696 aa13.79□□□□□ -0.2
ABCA2-218ENST00000487109 CASC4Q6P4E1 433 aa13.79□□□□□ -0.2
ABCA2-218ENST00000487109 PSPC1Q8WXF1 523 aaKnown RBP13.79□□□□□ -0.2
ABCA2-218ENST00000487109 GPHNQ9NQX3 736 aaPredicted RBP13.79□□□□□ -0.2
ABCA2-218ENST00000487109 TXNDC9O14530 226 aa13.79□□□□□ -0.2
ABCA2-218ENST00000487109 GNA11P29992 359 aa13.79□□□□□ -0.2
ABCA2-218ENST00000487109 DZIP3Q86Y13 1208 aaKnown RBP13.79□□□□□ -0.2
ABCA2-218ENST00000487109 TRIM75PA6NK02 468 aa13.79□□□□□ -0.2
ABCA2-218ENST00000487109 CHRNA2Q15822 529 aa13.79□□□□□ -0.2
ABCA2-218ENST00000487109 LINS1Q8NG48 757 aa13.79□□□□□ -0.2
ABCA2-218ENST00000487109 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.79□□□□□ -0.22e-15■■□□□ 14.4
ABCA2-218ENST00000487109 TAOK1Q7L7X3 1001 aa13.79□□□□□ -0.2
ABCA2-218ENST00000487109 RBM28Q9NW13 759 aaKnown RBP13.79□□□□□ -0.2
ABCA2-218ENST00000487109 PPME1Q9Y570 386 aa13.79□□□□□ -0.2
ABCA2-218ENST00000487109 PLCB4Q15147 1175 aa13.79□□□□□ -0.2
ABCA2-218ENST00000487109 Q6ZUG5 572 aa13.79□□□□□ -0.2
ABCA2-218ENST00000487109 TSNAXIP1Q2TAA8 658 aa13.79□□□□□ -0.2
ABCA2-218ENST00000487109 LPXNO60711 386 aa13.78□□□□□ -0.2
ABCA2-218ENST00000487109 INPP1P49441 399 aa13.78□□□□□ -0.2
ABCA2-218ENST00000487109 COPS6Q7L5N1 327 aa13.78□□□□□ -0.2
ABCA2-218ENST00000487109 CNPY2Q9Y2B0 182 aa13.78□□□□□ -0.2
ABCA2-218ENST00000487109 STK24Q9Y6E0 443 aa13.78□□□□□ -0.2
ABCA2-218ENST00000487109 A0A1B0GUA9 196 aa13.78□□□□□ -0.2
ABCA2-218ENST00000487109 ARHGEF12Q9NZN5 1544 aa13.78□□□□□ -0.2
ABCA2-218ENST00000487109 ADAMTS12P58397 1594 aa13.78□□□□□ -0.2
ABCA2-218ENST00000487109 NOLC1Q14978 699 aaKnown RBP eCLIP13.78□□□□□ -0.2
ABCA2-218ENST00000487109 ZKSCAN3Q9BRR0 538 aa13.78□□□□□ -0.2
ABCA2-218ENST00000487109 POLR3AO14802 1390 aaPredicted RBP13.78□□□□□ -0.2
ABCA2-218ENST00000487109 ATP8B2P98198 1209 aa13.78□□□□□ -0.2
ABCA2-218ENST00000487109 NECAB1Q8N987 351 aa13.78□□□□□ -0.2
ABCA2-218ENST00000487109 C8orf37Q96NL8 207 aa13.78□□□□□ -0.2
ABCA2-218ENST00000487109 STRN3Q13033 797 aa13.78□□□□□ -0.2
ABCA2-218ENST00000487109 TTLL3Q9Y4R7 772 aa13.78□□□□□ -0.2
ABCA2-218ENST00000487109 MAST3O60307 1309 aa13.78□□□□□ -0.2
ABCA2-218ENST00000487109 BRDTQ58F21 947 aaPredicted RBP13.78□□□□□ -0.2
ABCA2-218ENST00000487109 RBM26Q5T8P6 1007 aaKnown RBP13.78□□□□□ -0.2
ABCA2-218ENST00000487109 LRRC2Q9BYS8 371 aa13.78□□□□□ -0.2
ABCA2-218ENST00000487109 GLT8D2Q9H1C3 349 aa13.78□□□□□ -0.2
ABCA2-218ENST00000487109 PRAG1Q86YV5 1406 aa13.77□□□□□ -0.2
ABCA2-218ENST00000487109 SETD1BQ9UPS6 1966 aaKnown RBP13.77□□□□□ -0.2
ABCA2-218ENST00000487109 ATP6V1E1P36543 226 aa13.77□□□□□ -0.2
ABCA2-218ENST00000487109 RPS6KA2Q15349 733 aa13.77□□□□□ -0.2
ABCA2-218ENST00000487109 CCDC122Q5T0U0 273 aa13.77□□□□□ -0.2
ABCA2-218ENST00000487109 SPOUT1Q5T280 376 aaKnown RBP13.77□□□□□ -0.2
ABCA2-218ENST00000487109 ANKRD44Q8N8A2 993 aa13.77□□□□□ -0.2
ABCA2-218ENST00000487109 RAD50Q92878 1312 aa13.77□□□□□ -0.2
ABCA2-218ENST00000487109 TBC1D2Q9BYX2 928 aa13.77□□□□□ -0.2
ABCA2-218ENST00000487109 PAG1Q9NWQ8 432 aa13.77□□□□□ -0.2
ABCA2-218ENST00000487109 TUBBP07437 444 aa13.77□□□□□ -0.21
ABCA2-218ENST00000487109 PARP10Q53GL7 1025 aa13.77□□□□□ -0.21
ABCA2-218ENST00000487109 ATP2A3Q93084 1043 aa13.77□□□□□ -0.21
ABCA2-218ENST00000487109 C10orf67Q8IYJ2 551 aa13.77□□□□□ -0.21
ABCA2-218ENST00000487109 PPP1R2P41236 205 aa13.77□□□□□ -0.21
ABCA2-218ENST00000487109 ZNF365Q70YC5 407 aa13.77□□□□□ -0.21
ABCA2-218ENST00000487109 RIOK1Q9BRS2 568 aaKnown RBP13.77□□□□□ -0.21
ABCA2-218ENST00000487109 SLC12A2P55011 1212 aa13.76□□□□□ -0.21
ABCA2-218ENST00000487109 VWA3BQ502W6 1294 aa13.76□□□□□ -0.21
ABCA2-218ENST00000487109 YTHDC2Q9H6S0 1430 aaKnown RBP13.76□□□□□ -0.21
ABCA2-218ENST00000487109 TNFAIP3P21580 790 aa13.76□□□□□ -0.21
ABCA2-218ENST00000487109 LGSNQ5TDP6 509 aa13.76□□□□□ -0.21
ABCA2-218ENST00000487109 VCX3AQ9NNX9 186 aa13.76□□□□□ -0.21
ABCA2-218ENST00000487109 CCDC169A6NNP5 214 aa13.76□□□□□ -0.21
ABCA2-218ENST00000487109 GIGYF1O75420 1035 aaPredicted RBP13.76□□□□□ -0.21
ABCA2-218ENST00000487109 HAUS8Q9BT25 410 aa13.76□□□□□ -0.21
ABCA2-218ENST00000487109 CALUO43852 315 aaPredicted RBP13.76□□□□□ -0.21
ABCA2-218ENST00000487109 GOLGA6CA6NDK9 693 aa13.76□□□□□ -0.21
ABCA2-218ENST00000487109 GOLGA6BA6NDN3 693 aa13.76□□□□□ -0.21
ABCA2-218ENST00000487109 GOLGA6DP0CG33 693 aa13.76□□□□□ -0.21
ABCA2-218ENST00000487109 GOLGA6AQ9NYA3 693 aa13.76□□□□□ -0.21
ABCA2-218ENST00000487109 BRF1Q92994 677 aa13.76□□□□□ -0.21
ABCA2-218ENST00000487109 NOX5Q96PH1 765 aa13.76□□□□□ -0.21
ABCA2-218ENST00000487109 DNAJC25Q9H1X3 360 aa13.76□□□□□ -0.21
ABCA2-218ENST00000487109 DENND2AQ9ULE3 1009 aa13.76□□□□□ -0.21
ABCA2-218ENST00000487109 LDHBP07195 334 aaKnown RBP13.75□□□□□ -0.21
ABCA2-218ENST00000487109 USP48Q86UV5 1035 aa13.75□□□□□ -0.21
ABCA2-218ENST00000487109 AFAP1L1Q8TED9 768 aa13.75□□□□□ -0.21
ABCA2-218ENST00000487109 RILPQ96NA2 401 aa13.75□□□□□ -0.21
ABCA2-218ENST00000487109 PICK1Q9NRD5 415 aa13.75□□□□□ -0.21
ABCA2-218ENST00000487109 ATL3Q6DD88 541 aa13.75□□□□□ -0.21
ABCA2-218ENST00000487109 TTC6Q86TZ1 520 aa13.75□□□□□ -0.21
ABCA2-218ENST00000487109 TSPYL2Q9H2G4 693 aaPredicted RBP13.75□□□□□ -0.21
ABCA2-218ENST00000487109 TFCP2L1Q9NZI6 479 aa13.75□□□□□ -0.21
ABCA2-218ENST00000487109 BCAP29Q9UHQ4 241 aa13.75□□□□□ -0.21
ABCA2-218ENST00000487109 NOP56O00567 594 aaKnown RBP13.75□□□□□ -0.21
ABCA2-218ENST00000487109 STX17P56962 302 aa13.75□□□□□ -0.21
ABCA2-218ENST00000487109 TSHZ3Q63HK5 1081 aa13.75□□□□□ -0.21
ABCA2-218ENST00000487109 SV2BQ7L1I2 683 aa13.75□□□□□ -0.21
ABCA2-218ENST00000487109 CCDC186Q7Z3E2 898 aa13.75□□□□□ -0.21
ABCA2-218ENST00000487109 FAM200AQ8TCP9 573 aa13.75□□□□□ -0.21
ABCA2-218ENST00000487109 SPTLC2O15270 562 aa13.75□□□□□ -0.21
ABCA2-218ENST00000487109 SLC9C2Q5TAH2 1124 aa13.75□□□□□ -0.21
ABCA2-218ENST00000487109 CNGA4Q8IV77 575 aa13.75□□□□□ -0.21
ABCA2-218ENST00000487109 MAST1Q9Y2H9 1570 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms