RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 SLC12A7Q9Y666 1083 aa23.76■■□□□ 1.39
HPS3-206ENST00000486530 GOLGA8AA7E2F4 631 aa23.75■■□□□ 1.39
HPS3-206ENST00000486530 LIG1P18858 919 aa23.75■■□□□ 1.39
HPS3-206ENST00000486530 MECOMQ03112 1051 aa23.75■■□□□ 1.39
HPS3-206ENST00000486530 SLC51AQ86UW1 340 aa23.75■■□□□ 1.39
HPS3-206ENST00000486530 DDX19AQ9NUU7 478 aaKnown RBP23.75■■□□□ 1.39
HPS3-206ENST00000486530 RCOR1Q9UKL0 485 aa23.75■■□□□ 1.39
HPS3-206ENST00000486530 ERICH2A1L162 156 aa23.75■■□□□ 1.39
HPS3-206ENST00000486530 HOXA10P31260 410 aaPredicted RBP23.75■■□□□ 1.39
HPS3-206ENST00000486530 DYNLL1P63167 89 aaKnown RBP23.75■■□□□ 1.39
HPS3-206ENST00000486530 CHAF1AQ13111 956 aaPredicted RBP23.75■■□□□ 1.39
HPS3-206ENST00000486530 SPTY2D1Q68D10 685 aaPredicted RBP23.75■■□□□ 1.39
HPS3-206ENST00000486530 SYNE3Q6ZMZ3 975 aa23.75■■□□□ 1.39
HPS3-206ENST00000486530 TXNRD3Q86VQ6 643 aa23.75■■□□□ 1.39
HPS3-206ENST00000486530 RNF214Q8ND24 703 aa23.75■■□□□ 1.39
HPS3-206ENST00000486530 RBM17Q96I25 401 aaKnown RBP23.75■■□□□ 1.39
HPS3-206ENST00000486530 PGBD1Q96JS3 809 aa23.75■■□□□ 1.39
HPS3-206ENST00000486530 CAMKK2Q96RR4 588 aa23.75■■□□□ 1.39
HPS3-206ENST00000486530 NUP62CLQ9H1M0 184 aa23.75■■□□□ 1.39
HPS3-206ENST00000486530 RGPD3A6NKT7 1758 aaPredicted RBP23.74■■□□□ 1.39
HPS3-206ENST00000486530 RGPD4Q7Z3J3 1758 aa23.74■■□□□ 1.39
HPS3-206ENST00000486530 MINDY4BA8MYZ0 360 aa23.74■■□□□ 1.39
HPS3-206ENST00000486530 SF3B2Q13435 895 aaKnown RBP23.74■■□□□ 1.39
HPS3-206ENST00000486530 WTAPQ15007 396 aa23.74■■□□□ 1.39
HPS3-206ENST00000486530 TMTC2Q8N394 836 aa23.74■■□□□ 1.39
HPS3-206ENST00000486530 BICD2Q8TD16 824 aa23.74■■□□□ 1.39
HPS3-206ENST00000486530 FUCA2Q9BTY2 467 aa23.74■■□□□ 1.39
HPS3-206ENST00000486530 MYH2Q9UKX2 1941 aa23.74■■□□□ 1.39
HPS3-206ENST00000486530 PCP11498 1178 aaKnown RBP23.73■■□□□ 1.39
HPS3-206ENST00000486530 CDC27P30260 824 aa23.73■■□□□ 1.39
HPS3-206ENST00000486530 RCAN1P53805 252 aa23.73■■□□□ 1.39
HPS3-206ENST00000486530 EN1Q05925 392 aaPredicted RBP23.73■■□□□ 1.39
HPS3-206ENST00000486530 C15orf52Q6ZUT6 534 aaKnown RBP23.73■■□□□ 1.39
HPS3-206ENST00000486530 BRAPQ7Z569 592 aa23.73■■□□□ 1.39
HPS3-206ENST00000486530 ESR2Q92731 530 aa23.73■■□□□ 1.39
HPS3-206ENST00000486530 USP28Q96RU2 1077 aa23.73■■□□□ 1.39
HPS3-206ENST00000486530 DLEC1Q9Y238 1755 aa23.73■■□□□ 1.39
HPS3-206ENST00000486530 RXRAP19793 462 aa23.73■■□□□ 1.39
HPS3-206ENST00000486530 EZH2Q15910 746 aaKnown RBP23.73■■□□□ 1.39
HPS3-206ENST00000486530 PDLIM2Q96JY6 352 aa23.73■■□□□ 1.39
HPS3-206ENST00000486530 STK36Q9NRP7 1315 aa23.72■■□□□ 1.39
HPS3-206ENST00000486530 PRDX5P30044 214 aa23.72■■□□□ 1.39
HPS3-206ENST00000486530 NTRK3Q16288 839 aa23.72■■□□□ 1.39
HPS3-206ENST00000486530 UVSSAQ2YD98 709 aa23.72■■□□□ 1.39
HPS3-206ENST00000486530 CRNKL1Q9BZJ0 848 aaKnown RBP23.72■■□□□ 1.39
HPS3-206ENST00000486530 DACT1Q9NYF0 836 aa23.72■■□□□ 1.39
HPS3-206ENST00000486530 MAP3K11Q16584 847 aa23.71■■□□□ 1.39
HPS3-206ENST00000486530 ZNF804AQ7Z570 1209 aa23.71■■□□□ 1.39
HPS3-206ENST00000486530 WDR66Q8TBY9 1149 aa23.71■■□□□ 1.39
HPS3-206ENST00000486530 CRAMP1Q96RY5 1269 aa23.71■■□□□ 1.39
HPS3-206ENST00000486530 UBAC1Q9BSL1 405 aa23.71■■□□□ 1.39
HPS3-206ENST00000486530 ALG1Q9BT22 464 aa23.71■■□□□ 1.39
HPS3-206ENST00000486530 RTN4Q9NQC3 1192 aaKnown RBP23.71■■□□□ 1.39
HPS3-206ENST00000486530 FAM217BQ9NTX9 383 aaPredicted RBP23.71■■□□□ 1.39
HPS3-206ENST00000486530 BBOX1O75936 387 aa23.7■■□□□ 1.39
HPS3-206ENST00000486530 IARSP41252 1262 aaKnown RBP23.7■■□□□ 1.39
HPS3-206ENST00000486530 CEBPZQ03701 1054 aaKnown RBP23.7■■□□□ 1.39
HPS3-206ENST00000486530 OTUD7BQ6GQQ9 843 aa23.7■■□□□ 1.39
HPS3-206ENST00000486530 MYL10Q9BUA6 226 aa23.7■■□□□ 1.39
HPS3-206ENST00000486530 LRRC37AA6NMS7 1700 aa23.7■■□□□ 1.39
HPS3-206ENST00000486530 DZIP1Q86YF9 867 aaKnown RBP23.7■■□□□ 1.38
HPS3-206ENST00000486530 CCDC144CPQ8IYA2 1237 aa23.7■■□□□ 1.38
HPS3-206ENST00000486530 TDRD7Q8NHU6 1098 aaKnown RBP23.7■■□□□ 1.38
HPS3-206ENST00000486530 FTOQ9C0B1 505 aaKnown RBP eCLIP23.7■■□□□ 1.38
HPS3-206ENST00000486530 CLSTN2Q9H4D0 955 aa23.7■■□□□ 1.38
HPS3-206ENST00000486530 ATP8A2Q9NTI2 1148 aa23.7■■□□□ 1.38
HPS3-206ENST00000486530 RTEL1Q9NZ71 1219 aa23.7■■□□□ 1.38
HPS3-206ENST00000486530 CCDC192P0DO97 292 aa23.69■■□□□ 1.38
HPS3-206ENST00000486530 ZKSCAN3Q9BRR0 538 aa23.69■■□□□ 1.38
HPS3-206ENST00000486530 TNMDQ9H2S6 317 aa23.69■■□□□ 1.38
HPS3-206ENST00000486530 ANO8Q9HCE9 1232 aaPredicted RBP23.69■■□□□ 1.38
HPS3-206ENST00000486530 AATFQ9NY61 560 aaKnown RBP eCLIP23.69■■□□□ 1.38
HPS3-206ENST00000486530 NRXN2Q9P2S2 1712 aa23.69■■□□□ 1.38
HPS3-206ENST00000486530 MMP10P09238 476 aa23.68■■□□□ 1.38
HPS3-206ENST00000486530 FGRP09769 529 aa23.68■■□□□ 1.38
HPS3-206ENST00000486530 GPSM2P81274 684 aa23.68■■□□□ 1.38
HPS3-206ENST00000486530 KIF23Q02241 960 aaPredicted RBP23.68■■□□□ 1.38
HPS3-206ENST00000486530 CTR9Q6PD62 1173 aa23.68■■□□□ 1.38
HPS3-206ENST00000486530 STK11IPQ8N1F8 1099 aa23.68■■□□□ 1.38
HPS3-206ENST00000486530 RANBP6O60518 1105 aaKnown RBP23.68■■□□□ 1.38
HPS3-206ENST00000486530 IFNAR1P17181 557 aa23.68■■□□□ 1.38
HPS3-206ENST00000486530 RTN1Q16799 776 aa23.68■■□□□ 1.38
HPS3-206ENST00000486530 WASF1Q92558 559 aa23.68■■□□□ 1.38
HPS3-206ENST00000486530 PHKBQ93100 1093 aa23.68■■□□□ 1.38
HPS3-206ENST00000486530 CCDC196A0A1B0GTZ2 297 aa23.67■■□□□ 1.38
HPS3-206ENST00000486530 NR1I2O75469 434 aa23.67■■□□□ 1.38
HPS3-206ENST00000486530 FMNL1O95466 1100 aaPredicted RBP23.67■■□□□ 1.38
HPS3-206ENST00000486530 ATP2B4P23634 1241 aa23.67■■□□□ 1.38
HPS3-206ENST00000486530 SSRP1Q08945 709 aaKnown RBP23.67■■□□□ 1.38
HPS3-206ENST00000486530 SLC15A2Q16348 729 aa23.67■■□□□ 1.38
HPS3-206ENST00000486530 MYSM1Q5VVJ2 828 aa23.67■■□□□ 1.38
HPS3-206ENST00000486530 RBM43Q6ZSC3 357 aaKnown RBP23.67■■□□□ 1.38
HPS3-206ENST00000486530 DCP1AQ9NPI6 582 aaPredicted RBP23.67■■□□□ 1.38
HPS3-206ENST00000486530 POLR3EQ9NVU0 708 aa23.67■■□□□ 1.38
HPS3-206ENST00000486530 MYH6P13533 1939 aa23.67■■□□□ 1.38
HPS3-206ENST00000486530 TNKSO95271 1327 aa23.67■■□□□ 1.38
HPS3-206ENST00000486530 LDHBP07195 334 aaKnown RBP23.66■■□□□ 1.38
HPS3-206ENST00000486530 BAG6P46379 1132 aa23.66■■□□□ 1.38
HPS3-206ENST00000486530 SEC23AQ15436 765 aa23.66■■□□□ 1.38
HPS3-206ENST00000486530 ZNF654Q8IZM8 581 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms