RNA–Protein interactions for RNA: ENST00000486417.5

TMC1-204, Transcript of transmembrane channel like 1, humanhuman

TSL 2

Gene TMC1, Length 1,528 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-204ENST00000486417 TMX3Q96JJ7 454 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 TM6SF1Q9BZW5 370 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 HMG20BQ9P0W2 317 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 M0R2C6 588 aa8.63□□□□□ -1.03
TMC1-204ENST00000486417 ZKSCAN1P17029 563 aaPredicted RBP8.63□□□□□ -1.03
TMC1-204ENST00000486417 GTF2E1P29083 439 aaPredicted RBP8.63□□□□□ -1.03
TMC1-204ENST00000486417 CHRNDQ07001 517 aa8.63□□□□□ -1.03
TMC1-204ENST00000486417 RAB3GAP1Q15042 981 aa8.63□□□□□ -1.03
TMC1-204ENST00000486417 LRRFIP1Q32MZ4 808 aaKnown RBP8.63□□□□□ -1.03
TMC1-204ENST00000486417 ADCK5Q3MIX3 580 aa8.63□□□□□ -1.03
TMC1-204ENST00000486417 SLFNL1Q499Z3 407 aa8.63□□□□□ -1.03
TMC1-204ENST00000486417 GRIPAP1Q4V328 841 aa8.63□□□□□ -1.03
TMC1-204ENST00000486417 RNF20Q5VTR2 975 aa8.63□□□□□ -1.03
TMC1-204ENST00000486417 CCDC102BQ68D86 513 aa8.63□□□□□ -1.03
TMC1-204ENST00000486417 NOL8Q76FK4 1167 aaKnown RBP8.63□□□□□ -1.03
TMC1-204ENST00000486417 ANKRD18AQ8IVF6 992 aa8.63□□□□□ -1.03
TMC1-204ENST00000486417 CALR3Q96L12 384 aaKnown RBP8.63□□□□□ -1.03
TMC1-204ENST00000486417 JAKMIP1Q96N16 626 aaKnown RBP8.63□□□□□ -1.03
TMC1-204ENST00000486417 LRRC37AA6NMS7 1700 aa8.63□□□□□ -1.03
TMC1-204ENST00000486417 NRXN2Q9P2S2 1712 aa8.63□□□□□ -1.03
TMC1-204ENST00000486417 KIAA1551Q9HCM1 1747 aa8.62□□□□□ -1.03
TMC1-204ENST00000486417 ZFYP08048 801 aaPredicted RBP8.62□□□□□ -1.03
TMC1-204ENST00000486417 AK2P54819 239 aa8.62□□□□□ -1.03
TMC1-204ENST00000486417 TTF1Q15361 905 aaPredicted RBP8.62□□□□□ -1.03
TMC1-204ENST00000486417 KMT5BQ4FZB7 885 aa8.62□□□□□ -1.03
TMC1-204ENST00000486417 FOXD4L5Q5VV16 416 aaPredicted RBP8.62□□□□□ -1.03
TMC1-204ENST00000486417 ZGPATQ8N5A5 531 aaKnown RBP8.62□□□□□ -1.03
TMC1-204ENST00000486417 FOXD4L4Q8WXT5 416 aaPredicted RBP8.62□□□□□ -1.03
TMC1-204ENST00000486417 DSCC1Q9BVC3 393 aa8.62□□□□□ -1.03
TMC1-204ENST00000486417 CWC22Q9HCG8 908 aaKnown RBP8.62□□□□□ -1.03
TMC1-204ENST00000486417 ANKRD31Q8N7Z5 1873 aa8.62□□□□□ -1.03
TMC1-204ENST00000486417 SNAP23O00161 211 aa8.61□□□□□ -1.03
TMC1-204ENST00000486417 CYP2E1P05181 493 aaPredicted RBP8.61□□□□□ -1.03
TMC1-204ENST00000486417 CPA1P15085 419 aa8.61□□□□□ -1.03
TMC1-204ENST00000486417 PSMA5P28066 241 aa8.61□□□□□ -1.03
TMC1-204ENST00000486417 TSGA10IPQ3SY00 556 aa8.61□□□□□ -1.03
TMC1-204ENST00000486417 VPS53Q5VIR6 699 aa8.61□□□□□ -1.03
TMC1-204ENST00000486417 TPTE2Q6XPS3 522 aa8.61□□□□□ -1.03
TMC1-204ENST00000486417 RUFY3Q7L099 469 aa8.61□□□□□ -1.03
TMC1-204ENST00000486417 APPBP2Q92624 585 aa8.61□□□□□ -1.03
TMC1-204ENST00000486417 CELF1Q92879 486 aaKnown RBP8.61□□□□□ -1.03
TMC1-204ENST00000486417 OSBP2Q969R2 916 aa8.61□□□□□ -1.03
TMC1-204ENST00000486417 NLRP3Q96P20 1036 aa8.61□□□□□ -1.03
TMC1-204ENST00000486417 PIH1D3Q9NQM4 214 aaKnown RBP8.61□□□□□ -1.03
TMC1-204ENST00000486417 PDRG1Q9NUG6 133 aa8.61□□□□□ -1.03
TMC1-204ENST00000486417 BSDC1Q9NW68 430 aaPredicted RBP8.61□□□□□ -1.03
TMC1-204ENST00000486417 CYP46A1Q9Y6A2 500 aa8.61□□□□□ -1.03
TMC1-204ENST00000486417 TAF6LQ9Y6J9 622 aa8.61□□□□□ -1.03
TMC1-204ENST00000486417 CHD4Q14839 1912 aa8.61□□□□□ -1.03
TMC1-204ENST00000486417 QSER1Q2KHR3 1735 aa8.61□□□□□ -1.03
TMC1-204ENST00000486417 TIAM2Q8IVF5 1701 aa8.61□□□□□ -1.03
TMC1-204ENST00000486417 COL1A1P02452 1464 aaPredicted RBP8.61□□□□□ -1.03
TMC1-204ENST00000486417 GYS1P13807 737 aa8.6□□□□□ -1.03
TMC1-204ENST00000486417 KRT32Q14532 448 aa8.6□□□□□ -1.03
TMC1-204ENST00000486417 NFIXQ14938 502 aa8.6□□□□□ -1.03
TMC1-204ENST00000486417 TXNRD1Q16881 649 aa8.6□□□□□ -1.03
TMC1-204ENST00000486417 ZSCAN25Q6NSZ9 544 aa8.6□□□□□ -1.03
TMC1-204ENST00000486417 BLOC1S2Q6QNY1 142 aa8.6□□□□□ -1.03
TMC1-204ENST00000486417 RETREG3Q86VR2 466 aa8.6□□□□□ -1.03
TMC1-204ENST00000486417 CCDC24Q8N4L8 307 aa8.6□□□□□ -1.03
TMC1-204ENST00000486417 TNPO1Q92973 898 aaKnown RBP8.6□□□□□ -1.03
TMC1-204ENST00000486417 INTS4Q96HW7 963 aaKnown RBP8.6□□□□□ -1.03
TMC1-204ENST00000486417 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.6□□□□□ -1.03
TMC1-204ENST00000486417 HPS5Q9UPZ3 1129 aa8.6□□□□□ -1.03
TMC1-204ENST00000486417 CACNA1SQ13698 1873 aa8.6□□□□□ -1.03
TMC1-204ENST00000486417 COL11A2P13942 1736 aaPredicted RBP8.6□□□□□ -1.03
TMC1-204ENST00000486417 SOWAHBA6NEL2 793 aa8.59□□□□□ -1.03
TMC1-204ENST00000486417 CYP21A2P08686 494 aa8.59□□□□□ -1.03
TMC1-204ENST00000486417 HSPD1P10809 573 aaKnown RBP8.59□□□□□ -1.03
TMC1-204ENST00000486417 RPS6KB1P23443 525 aa8.59□□□□□ -1.03
TMC1-204ENST00000486417 MCM4P33991 863 aa8.59□□□□□ -1.03
TMC1-204ENST00000486417 ADD2P35612 726 aa8.59□□□□□ -1.03
TMC1-204ENST00000486417 NUCB2P80303 420 aa8.59□□□□□ -1.03
TMC1-204ENST00000486417 RASGRF1Q13972 1273 aa8.59□□□□□ -1.03
TMC1-204ENST00000486417 UBE4AQ14139 1066 aa8.59□□□□□ -1.03
TMC1-204ENST00000486417 WASHC4Q2M389 1173 aa8.59□□□□□ -1.03
TMC1-204ENST00000486417 CNBD1Q8NA66 436 aa8.59□□□□□ -1.03
TMC1-204ENST00000486417 SPATA5Q8NB90 893 aa8.59□□□□□ -1.03
TMC1-204ENST00000486417 PRM3Q9NNZ6 103 aa8.59□□□□□ -1.03
TMC1-204ENST00000486417 MINPP1Q9UNW1 487 aa8.59□□□□□ -1.03
TMC1-204ENST00000486417 LIMCH1Q9UPQ0 1083 aa8.59□□□□□ -1.03
TMC1-204ENST00000486417 ZNF804BA4D1E1 1349 aa8.59□□□□□ -1.03
TMC1-204ENST00000486417 LTBP1Q14766 1721 aa8.59□□□□□ -1.03
TMC1-204ENST00000486417 NPHP1O15259 732 aa8.59□□□□□ -1.03
TMC1-204ENST00000486417 FOXP2O15409 715 aa8.59□□□□□ -1.03
TMC1-204ENST00000486417 LARGE1O95461 756 aa8.59□□□□□ -1.03
TMC1-204ENST00000486417 HMGB2P26583 209 aaKnown RBP8.59□□□□□ -1.03
TMC1-204ENST00000486417 COL9A3Q14050 684 aaPredicted RBP8.59□□□□□ -1.03
TMC1-204ENST00000486417 UBE3CQ15386 1083 aa8.59□□□□□ -1.03
TMC1-204ENST00000486417 PRR5LQ6MZQ0 368 aa8.59□□□□□ -1.03
TMC1-204ENST00000486417 PUS7LQ9H0K6 701 aaKnown RBP8.59□□□□□ -1.03
TMC1-204ENST00000486417 ALDH8A1Q9H2A2 487 aaPredicted RBP8.59□□□□□ -1.03
TMC1-204ENST00000486417 WWC3Q9ULE0 1092 aa8.59□□□□□ -1.03
TMC1-204ENST00000486417 CCDC88AQ3V6T2 1871 aa8.58□□□□□ -1.04
TMC1-204ENST00000486417 DUOX1Q9NRD9 1551 aa8.58□□□□□ -1.04
TMC1-204ENST00000486417 EP400Q96L91 3159 aa8.58□□□□□ -1.04
TMC1-204ENST00000486417 TCRBV5S4A2TA0A5A2 114 aa8.58□□□□□ -1.04
TMC1-204ENST00000486417 PLSCR1O15162 318 aa8.58□□□□□ -1.04
TMC1-204ENST00000486417 GPAA1O43292 621 aa8.58□□□□□ -1.04
TMC1-204ENST00000486417 IGSF3O75054 1194 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms