RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 ALDH8A1Q9H2A2 487 aaPredicted RBP17.09■□□□□ 0.33
COL9A1-207ENST00000486080 ECM29Q5VYK3 1845 aa17.08■□□□□ 0.33
COL9A1-207ENST00000486080 LTBP3Q9NS15 1303 aa17.08■□□□□ 0.33
COL9A1-207ENST00000486080 USP17L8P0C7I0 530 aa17.08■□□□□ 0.33
COL9A1-207ENST00000486080 PLCG2P16885 1265 aa17.08■□□□□ 0.33
COL9A1-207ENST00000486080 SLC4A8Q2Y0W8 1093 aa17.08■□□□□ 0.33
COL9A1-207ENST00000486080 AKNAD1Q5T1N1 836 aa17.08■□□□□ 0.33
COL9A1-207ENST00000486080 APOBEC3HQ6NTF7 200 aaKnown RBP17.08■□□□□ 0.33
COL9A1-207ENST00000486080 RSBN1LQ6PCB5 846 aaPredicted RBP17.08■□□□□ 0.33
COL9A1-207ENST00000486080 Q6ZUG5 572 aa17.08■□□□□ 0.33
COL9A1-207ENST00000486080 MAPKAPK5Q8IW41 473 aa17.08■□□□□ 0.33
COL9A1-207ENST00000486080 MCM9Q9NXL9 1143 aa17.08■□□□□ 0.33
COL9A1-207ENST00000486080 ANAPC4Q9UJX5 808 aa17.08■□□□□ 0.33
COL9A1-207ENST00000486080 LIMCH1Q9UPQ0 1083 aa17.08■□□□□ 0.33
COL9A1-207ENST00000486080 MYH1P12882 1939 aa17.07■□□□□ 0.32
COL9A1-207ENST00000486080 LARGE1O95461 756 aa17.07■□□□□ 0.32
COL9A1-207ENST00000486080 HSP90AA1P07900 732 aaKnown RBP17.07■□□□□ 0.32
COL9A1-207ENST00000486080 ANTXR2P58335 489 aa17.07■□□□□ 0.32
COL9A1-207ENST00000486080 CXCL9Q07325 125 aa17.07■□□□□ 0.32
COL9A1-207ENST00000486080 RALYLQ86SE5 291 aaKnown RBP17.07■□□□□ 0.32
COL9A1-207ENST00000486080 CERS3Q8IU89 383 aa17.07■□□□□ 0.32
COL9A1-207ENST00000486080 JDP2Q8WYK2 163 aa17.07■□□□□ 0.32
COL9A1-207ENST00000486080 ZBTB12Q9Y330 459 aaPredicted RBP17.07■□□□□ 0.32
COL9A1-207ENST00000486080 B4E1Z4 1266 aa17.07■□□□□ 0.32
COL9A1-207ENST00000486080 TRDNQ13061 729 aa17.07■□□□□ 0.32
COL9A1-207ENST00000486080 MFSD6Q6ZSS7 791 aa17.07■□□□□ 0.32
COL9A1-207ENST00000486080 STAG1Q8WVM7 1258 aa17.07■□□□□ 0.32
COL9A1-207ENST00000486080 ZDHHC15Q96MV8 337 aa17.07■□□□□ 0.32
COL9A1-207ENST00000486080 GMLQ99445 158 aa17.07■□□□□ 0.32
COL9A1-207ENST00000486080 MRIQ9BWK5 157 aa17.07■□□□□ 0.32
COL9A1-207ENST00000486080 TPCN1Q9ULQ1 816 aa17.07■□□□□ 0.32
COL9A1-207ENST00000486080 DDX60LQ5H9U9 1706 aaKnown RBP17.06■□□□□ 0.32
COL9A1-207ENST00000486080 MCM5P33992 734 aa17.06■□□□□ 0.32
COL9A1-207ENST00000486080 RBM5P52756 815 aaKnown RBP eCLIP17.06■□□□□ 0.32
COL9A1-207ENST00000486080 HDLBPQ00341 1268 aaKnown RBP17.06■□□□□ 0.32
COL9A1-207ENST00000486080 SBK1Q52WX2 424 aa17.06■□□□□ 0.32
COL9A1-207ENST00000486080 CYB5R4Q7L1T6 521 aa17.06■□□□□ 0.32
COL9A1-207ENST00000486080 GPHNQ9NQX3 736 aaPredicted RBP17.06■□□□□ 0.32
COL9A1-207ENST00000486080 USP40Q9NVE5 1235 aa17.06■□□□□ 0.32
COL9A1-207ENST00000486080 SAP30BPQ9UHR5 308 aaKnown RBP17.06■□□□□ 0.32
COL9A1-207ENST00000486080 PRC1O43663 620 aa17.05■□□□□ 0.32
COL9A1-207ENST00000486080 FGD1P98174 961 aa17.05■□□□□ 0.32
COL9A1-207ENST00000486080 ANKRD1Q15327 319 aa17.05■□□□□ 0.32
COL9A1-207ENST00000486080 RRP12Q5JTH9 1297 aaKnown RBP17.05■□□□□ 0.32
COL9A1-207ENST00000486080 CDC42EP5Q6NZY7 148 aa17.05■□□□□ 0.32
COL9A1-207ENST00000486080 ARHGAP27Q6ZUM4 889 aa17.05■□□□□ 0.32
COL9A1-207ENST00000486080 ARPP21Q9UBL0 812 aaPredicted RBP17.05■□□□□ 0.32
COL9A1-207ENST00000486080 SERPINA10Q9UK55 444 aa17.05■□□□□ 0.32
COL9A1-207ENST00000486080 FLT1P17948 1338 aa17.05■□□□□ 0.32
COL9A1-207ENST00000486080 MYO3BQ8WXR4 1341 aa17.05■□□□□ 0.32
COL9A1-207ENST00000486080 WDHD1O75717 1129 aaPredicted RBP17.05■□□□□ 0.32
COL9A1-207ENST00000486080 CUL4AQ13619 759 aa17.05■□□□□ 0.32
COL9A1-207ENST00000486080 ME3Q16798 604 aa17.05■□□□□ 0.32
COL9A1-207ENST00000486080 BRF1Q92994 677 aa17.05■□□□□ 0.32
COL9A1-207ENST00000486080 TOMM22Q9NS69 142 aa17.05■□□□□ 0.32
COL9A1-207ENST00000486080 KDM4AO75164 1064 aa17.04■□□□□ 0.32
COL9A1-207ENST00000486080 PICALMQ13492 652 aa17.04■□□□□ 0.32
COL9A1-207ENST00000486080 C12orf60Q5U649 245 aa17.04■□□□□ 0.32
COL9A1-207ENST00000486080 CIAPIN1Q6FI81 312 aa17.04■□□□□ 0.32
COL9A1-207ENST00000486080 AGXT2Q9BYV1 514 aa17.04■□□□□ 0.32
COL9A1-207ENST00000486080 CNNM2Q9H8M5 875 aa17.04■□□□□ 0.32
COL9A1-207ENST00000486080 DDX4Q9NQI0 724 aaKnown RBP17.04■□□□□ 0.32
COL9A1-207ENST00000486080 ZSWIM5Q9P217 1185 aa17.04■□□□□ 0.32
COL9A1-207ENST00000486080 SBF1O95248 1867 aa17.04■□□□□ 0.32
COL9A1-207ENST00000486080 PRDM1O75626 825 aa17.03■□□□□ 0.32
COL9A1-207ENST00000486080 PLCD1P51178 756 aa17.03■□□□□ 0.32
COL9A1-207ENST00000486080 APOBRQ0VD83 1088 aa17.03■□□□□ 0.32
COL9A1-207ENST00000486080 CFAP100Q494V2 611 aa17.03■□□□□ 0.32
COL9A1-207ENST00000486080 NECAB1Q8N987 351 aa17.03■□□□□ 0.32
COL9A1-207ENST00000486080 ZSCAN31Q96LW9 406 aaPredicted RBP17.03■□□□□ 0.32
COL9A1-207ENST00000486080 KRT23Q9C075 422 aa17.03■□□□□ 0.32
COL9A1-207ENST00000486080 RNF41Q9H4P4 317 aaPredicted RBP17.03■□□□□ 0.32
COL9A1-207ENST00000486080 DDIT3P35638 169 aa17.03■□□□□ 0.32
COL9A1-207ENST00000486080 DICER1Q9UPY3 1922 aaKnown RBP17.02■□□□□ 0.32
COL9A1-207ENST00000486080 POLR3DP05423 398 aaPredicted RBP17.02■□□□□ 0.31
COL9A1-207ENST00000486080 FGRP09769 529 aa17.02■□□□□ 0.31
COL9A1-207ENST00000486080 YBX3P16989 372 aaKnown RBP eCLIP17.02■□□□□ 0.31
COL9A1-207ENST00000486080 CACNB3P54284 484 aa17.02■□□□□ 0.31
COL9A1-207ENST00000486080 ST3GAL1Q11201 340 aa17.02■□□□□ 0.31
COL9A1-207ENST00000486080 NFIAQ12857 509 aa17.02■□□□□ 0.31
COL9A1-207ENST00000486080 AGBL3Q8NEM8 1001 aa17.02■□□□□ 0.31
COL9A1-207ENST00000486080 DYNLL2Q96FJ2 89 aa17.02■□□□□ 0.31
COL9A1-207ENST00000486080 PRMT6Q96LA8 375 aaPredicted RBP17.02■□□□□ 0.31
COL9A1-207ENST00000486080 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.02■□□□□ 0.31
COL9A1-207ENST00000486080 WDR19Q8NEZ3 1342 aa17.02■□□□□ 0.31
COL9A1-207ENST00000486080 DTNBO60941 627 aa17.01■□□□□ 0.31
COL9A1-207ENST00000486080 STK3Q13188 491 aa17.01■□□□□ 0.31
COL9A1-207ENST00000486080 CCDC83Q8IWF9 413 aa17.01■□□□□ 0.31
COL9A1-207ENST00000486080 FBXL16Q8N461 479 aa17.01■□□□□ 0.31
COL9A1-207ENST00000486080 SH2B1Q9NRF2 756 aaPredicted RBP17.01■□□□□ 0.31
COL9A1-207ENST00000486080 SHTN1A0MZ66 631 aa17■□□□□ 0.31
COL9A1-207ENST00000486080 FZD9O00144 591 aa17■□□□□ 0.31
COL9A1-207ENST00000486080 TNIP1Q15025 636 aa17■□□□□ 0.31
COL9A1-207ENST00000486080 ZKSCAN3Q9BRR0 538 aa17■□□□□ 0.31
COL9A1-207ENST00000486080 TDRD3Q9H7E2 651 aaKnown RBP17■□□□□ 0.31
COL9A1-207ENST00000486080 SENP2Q9HC62 589 aa17■□□□□ 0.31
COL9A1-207ENST00000486080 SLC3A2P08195 630 aaKnown RBP17■□□□□ 0.31
COL9A1-207ENST00000486080 ZFPM1Q8IX07 1006 aa17■□□□□ 0.31
COL9A1-207ENST00000486080 AMOTL1Q8IY63 956 aa17■□□□□ 0.31
COL9A1-207ENST00000486080 OGFOD1Q8N543 542 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms