RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 UNC80Q8N2C7 3258 aa24.16■■□□□ 1.46
CHRD-216ENST00000486066 IRF5Q13568 498 aa24.16■■□□□ 1.46
CHRD-216ENST00000486066 PXYLP1Q8TE99 480 aa24.16■■□□□ 1.46
CHRD-216ENST00000486066 IDI2Q9BXS1 227 aa24.16■■□□□ 1.46
CHRD-216ENST00000486066 AFG3L2Q9Y4W6 797 aa24.16■■□□□ 1.46
CHRD-216ENST00000486066 SH3BP5LQ7L8J4 393 aa24.15■■□□□ 1.46
CHRD-216ENST00000486066 SCYL3Q8IZE3 742 aa24.15■■□□□ 1.46
CHRD-216ENST00000486066 PAK6Q9NQU5 681 aaPredicted RBP24.15■■□□□ 1.46
CHRD-216ENST00000486066 NR2E3Q9Y5X4 410 aa24.15■■□□□ 1.46
CHRD-216ENST00000486066 LAMA2P24043 3122 aaKnown RBP24.15■■□□□ 1.46
CHRD-216ENST00000486066 GAKO14976 1311 aa24.14■■□□□ 1.46
CHRD-216ENST00000486066 PTPRCP08575 1304 aa24.14■■□□□ 1.46
CHRD-216ENST00000486066 SOX1O00570 391 aaPredicted RBP24.14■■□□□ 1.45
CHRD-216ENST00000486066 SLC5A1P13866 664 aa24.14■■□□□ 1.45
CHRD-216ENST00000486066 CAPN2P17655 700 aa24.14■■□□□ 1.45
CHRD-216ENST00000486066 PTPRAP18433 802 aa24.14■■□□□ 1.45
CHRD-216ENST00000486066 FLT3LGP49771 235 aa24.14■■□□□ 1.45
CHRD-216ENST00000486066 CRISPLD2Q9H0B8 497 aa24.14■■□□□ 1.45
CHRD-216ENST00000486066 ADCY3O60266 1144 aa24.13■■□□□ 1.45
CHRD-216ENST00000486066 FASTKD5Q7L8L6 764 aaKnown RBP24.13■■□□□ 1.45
CHRD-216ENST00000486066 USP40Q9NVE5 1235 aa24.13■■□□□ 1.45
CHRD-216ENST00000486066 ZHX2Q9Y6X8 837 aa24.13■■□□□ 1.45
CHRD-216ENST00000486066 LOC285556D6RIA3 1793 aa24.13■■□□□ 1.45
CHRD-216ENST00000486066 ENTPD3O75355 529 aa24.12■■□□□ 1.45
CHRD-216ENST00000486066 INHAP05111 366 aa24.12■■□□□ 1.45
CHRD-216ENST00000486066 ELNP15502 786 aa24.12■■□□□ 1.45
CHRD-216ENST00000486066 BIN2Q9UBW5 565 aaPredicted RBP24.12■■□□□ 1.45
CHRD-216ENST00000486066 LDHBP07195 334 aaKnown RBP24.11■■□□□ 1.45
CHRD-216ENST00000486066 FBXO3Q9UK99 471 aa24.11■■□□□ 1.45
CHRD-216ENST00000486066 SLURP2P0DP57 97 aa24.1■■□□□ 1.45
CHRD-216ENST00000486066 RGS3P49796 1198 aa24.1■■□□□ 1.45
CHRD-216ENST00000486066 SEMA3EO15041 775 aa24.09■■□□□ 1.45
CHRD-216ENST00000486066 CIAO1O76071 339 aa24.09■■□□□ 1.45
CHRD-216ENST00000486066 PLXNB2O15031 1838 aa24.09■■□□□ 1.45
CHRD-216ENST00000486066 DNAH12Q6ZR08 3092 aa24.09■■□□□ 1.45
CHRD-216ENST00000486066 DDTLA6NHG4 134 aaPredicted RBP24.08■■□□□ 1.45
CHRD-216ENST00000486066 PHKA1P46020 1223 aa24.08■■□□□ 1.45
CHRD-216ENST00000486066 FAM163AQ96GL9 167 aaPredicted RBP24.08■■□□□ 1.45
CHRD-216ENST00000486066 DEFB118Q96PH6 123 aa24.08■■□□□ 1.45
CHRD-216ENST00000486066 DDX4Q9NQI0 724 aaKnown RBP24.08■■□□□ 1.45
CHRD-216ENST00000486066 CTNND1O60716 968 aaKnown RBP24.07■■□□□ 1.44
CHRD-216ENST00000486066 ATP2B3Q16720 1220 aa24.07■■□□□ 1.44
CHRD-216ENST00000486066 SSH1Q8WYL5 1049 aa24.07■■□□□ 1.44
CHRD-216ENST00000486066 LRCH3Q96II8 777 aa24.07■■□□□ 1.44
CHRD-216ENST00000486066 DENND2AQ9ULE3 1009 aa24.07■■□□□ 1.44
CHRD-216ENST00000486066 ATAD5Q96QE3 1844 aa24.06■■□□□ 1.44
CHRD-216ENST00000486066 TNPO2O14787 897 aaKnown RBP24.06■■□□□ 1.44
CHRD-216ENST00000486066 EVI5O60447 810 aa24.06■■□□□ 1.44
CHRD-216ENST00000486066 ZEB1P37275 1124 aaPredicted RBP24.06■■□□□ 1.44
CHRD-216ENST00000486066 GDF15Q99988 308 aa24.06■■□□□ 1.44
CHRD-216ENST00000486066 PICK1Q9NRD5 415 aa24.06■■□□□ 1.44
CHRD-216ENST00000486066 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.06■■□□□ 1.44
CHRD-216ENST00000486066 AGTPBP1Q9UPW5 1226 aa24.06■■□□□ 1.44
CHRD-216ENST00000486066 PDS5AQ29RF7 1337 aaKnown RBP24.06■■□□□ 1.44
CHRD-216ENST00000486066 MNX1P50219 401 aaPredicted RBP24.05■■□□□ 1.44
CHRD-216ENST00000486066 GADL1Q6ZQY3 521 aa24.05■■□□□ 1.44
CHRD-216ENST00000486066 BMP8BP34820 402 aa24.04■■□□□ 1.44
CHRD-216ENST00000486066 FAM110CQ1W6H9 321 aa24.04■■□□□ 1.44
CHRD-216ENST00000486066 TREML2Q5T2D2 321 aa24.04■■□□□ 1.44
CHRD-216ENST00000486066 DIS3LQ8TF46 1054 aaKnown RBP24.04■■□□□ 1.44
CHRD-216ENST00000486066 ZNF384Q8TF68 577 aa24.04■■□□□ 1.44
CHRD-216ENST00000486066 PAWRQ96IZ0 340 aaKnown RBP24.04■■□□□ 1.44
CHRD-216ENST00000486066 GNL3LQ9NVN8 582 aaKnown RBP24.04■■□□□ 1.44
CHRD-216ENST00000486066 STAP2Q9UGK3 403 aa24.04■■□□□ 1.44
CHRD-216ENST00000486066 DLL1O00548 723 aa24.03■■□□□ 1.44
CHRD-216ENST00000486066 TBC1D12O60347 775 aa24.03■■□□□ 1.44
CHRD-216ENST00000486066 TFRCP02786 760 aaKnown RBP24.03■■□□□ 1.44
CHRD-216ENST00000486066 SLC17A8Q8NDX2 589 aa24.03■■□□□ 1.44
CHRD-216ENST00000486066 DDX60LQ5H9U9 1706 aaKnown RBP24.03■■□□□ 1.44
CHRD-216ENST00000486066 COL2A1P02458 1487 aaPredicted RBP24.02■■□□□ 1.44
CHRD-216ENST00000486066 NPM3O75607 178 aaKnown RBP24.02■■□□□ 1.44
CHRD-216ENST00000486066 ADORA1P30542 326 aa24.02■■□□□ 1.44
CHRD-216ENST00000486066 RHBDL3P58872 404 aa24.02■■□□□ 1.44
CHRD-216ENST00000486066 RASGRF1Q13972 1273 aa24.02■■□□□ 1.44
CHRD-216ENST00000486066 CCDC102BQ68D86 513 aa24.02■■□□□ 1.44
CHRD-216ENST00000486066 GPR153Q6NV75 609 aa24.02■■□□□ 1.44
CHRD-216ENST00000486066 CCDC84Q86UT8 332 aaPredicted RBP24.02■■□□□ 1.44
CHRD-216ENST00000486066 ANKRD13CQ8N6S4 541 aa24.02■■□□□ 1.44
CHRD-216ENST00000486066 ANKLE1Q8NAG6 615 aa24.02■■□□□ 1.44
CHRD-216ENST00000486066 SMCR8Q8TEV9 937 aaPredicted RBP24.02■■□□□ 1.44
CHRD-216ENST00000486066 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.02■■□□□ 1.44
CHRD-216ENST00000486066 CEP126Q9P2H0 1117 aa24.02■■□□□ 1.44
CHRD-216ENST00000486066 GJD2Q9UKL4 321 aa24.02■■□□□ 1.44
CHRD-216ENST00000486066 SIPA1L1O43166 1804 aa24.01■■□□□ 1.43
CHRD-216ENST00000486066 TRIM75PA6NK02 468 aa24.01■■□□□ 1.43
CHRD-216ENST00000486066 ZGPATQ8N5A5 531 aaKnown RBP24.01■■□□□ 1.43
CHRD-216ENST00000486066 PROCA1Q8NCQ7 364 aaPredicted RBP24.01■■□□□ 1.43
CHRD-216ENST00000486066 SIL1Q9H173 461 aa24.01■■□□□ 1.43
CHRD-216ENST00000486066 LRRFIP2Q9Y608 721 aaKnown RBP24.01■■□□□ 1.43
CHRD-216ENST00000486066 VCANP13611 3396 aa24■■□□□ 1.43
CHRD-216ENST00000486066 IL15P40933 162 aaPredicted RBP24■■□□□ 1.43
CHRD-216ENST00000486066 NECAB2Q7Z6G3 386 aa24■■□□□ 1.43
CHRD-216ENST00000486066 GPR75-ASB3A0A0A6YYF3 556 aa23.99■■□□□ 1.43
CHRD-216ENST00000486066 COA7Q96BR5 231 aa23.99■■□□□ 1.43
CHRD-216ENST00000486066 COPRSQ9NQ92 184 aa23.99■■□□□ 1.43
CHRD-216ENST00000486066 MROH7-TTC4A0A0A0MT08 1334 aa23.99■■□□□ 1.43
CHRD-216ENST00000486066 EYSQ5T1H1 3165 aa23.99■■□□□ 1.43
CHRD-216ENST00000486066 BTDP43251 543 aa23.98■■□□□ 1.43
CHRD-216ENST00000486066 HMGCRP04035 888 aa23.97■■□□□ 1.43
CHRD-216ENST00000486066 RRP1BQ14684 758 aaKnown RBP23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms