RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 SOS1Q07889 1333 aaPredicted RBP11.83□□□□□ -0.52
SRGAP3-207ENST00000485983 F13A1P00488 732 aa11.83□□□□□ -0.52
SRGAP3-207ENST00000485983 GTF2F1P35269 517 aaKnown RBP eCLIP11.83□□□□□ -0.52
SRGAP3-207ENST00000485983 CREB3L3Q68CJ9 461 aa11.83□□□□□ -0.52
SRGAP3-207ENST00000485983 NAP1L3Q99457 506 aaPredicted RBP11.83□□□□□ -0.52
SRGAP3-207ENST00000485983 CACYBPQ9HB71 228 aaKnown RBP11.83□□□□□ -0.52
SRGAP3-207ENST00000485983 STIM2Q9P246 746 aa11.83□□□□□ -0.52
SRGAP3-207ENST00000485983 RXRAP19793 462 aa11.83□□□□□ -0.52
SRGAP3-207ENST00000485983 TUBB4BP68371 445 aa11.83□□□□□ -0.52
SRGAP3-207ENST00000485983 KLHL40Q2TBA0 621 aa11.83□□□□□ -0.52
SRGAP3-207ENST00000485983 TMEM87BQ96K49 555 aa11.83□□□□□ -0.52
SRGAP3-207ENST00000485983 CNNM4Q6P4Q7 775 aa11.83□□□□□ -0.52
SRGAP3-207ENST00000485983 CUL4BQ13620 913 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 TSGA10Q9BZW7 698 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 BICC1Q9H694 974 aaKnown RBP11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 KCNK9Q9NPC2 374 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 GUCA1BQ9UMX6 200 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 TLDC2A0PJX2 215 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 CETN3O15182 167 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 DEXIO95424 95 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 OTUD7BQ6GQQ9 843 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 CD2APQ9Y5K6 639 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 VAV2P52735 878 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 RILPL1Q5EBL4 403 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 NCAPH2Q6IBW4 605 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 NBPF3Q9H094 633 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 PDE4DQ08499 809 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 GLG1Q92896 1179 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 EYA1Q99502 592 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 CARD10Q9BWT7 1032 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 DNAJC25Q9H1X3 360 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 AFG3L2Q9Y4W6 797 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 A0A1B0GUL7 405 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 DDX39AO00148 427 aaKnown RBP11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 CCNT1O60563 726 aaKnown RBP11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 TCP10Q12799 353 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 AFAP1L2Q8N4X5 818 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 CCDC26Q8TAB7 109 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 SRRTQ9BXP5 876 aaKnown RBP11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 FAM184BQ9ULE4 1060 aa11.82□□□□□ -0.52
SRGAP3-207ENST00000485983 SMIM23A6NLE4 172 aa11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 NOL3O60936 208 aaKnown RBP11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 PRPF6O94906 941 aaKnown RBP11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 KRT19P08727 400 aa11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 P4HA1P13674 534 aa11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 UAP1Q16222 522 aaPredicted RBP11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 NLRX1Q86UT6 975 aa11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 ZNF830Q96NB3 372 aaPredicted RBP11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 NOC4LQ9BVI4 516 aaKnown RBP11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 CNGA1P29973 690 aa11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 HOXC9P31274 260 aa11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 PRIM1P49642 420 aaKnown RBP11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 DNM1Q05193 864 aaKnown RBP11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 DCAF15Q66K64 600 aa11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 ARFGAP2Q8N6H7 521 aa11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 ADCY7P51828 1080 aa11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 GNPTABQ3T906 1256 aa11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 VPS52Q8N1B4 723 aa11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 CHURC1Q8WUH1 139 aa11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 ARMT1Q9H993 441 aa11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 DNM3Q9UQ16 869 aa11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 TRPM2O94759 1503 aa11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 CD19P15391 556 aa11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 KCNA6P17658 529 aa11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 TXKP42681 527 aa11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 ARHGAP27Q6ZUM4 889 aa11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 LZTS2Q9BRK4 669 aa11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 POLKQ9UBT6 870 aa11.81□□□□□ -0.52
SRGAP3-207ENST00000485983 RRP9O43818 475 aaKnown RBP11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 CFBP00751 764 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 ATL3Q6DD88 541 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 FNBP4Q8N3X1 1017 aaPredicted RBP11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 B4E1Z4 1266 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 ITIH3Q06033 890 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 SETDB1Q15047 1291 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 ERCC6LQ2NKX8 1250 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 ZNF790Q6PG37 636 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 ZNF365Q70YC5 407 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 CNGA4Q8IV77 575 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 IFT81Q8WYA0 676 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 CAPZA3Q96KX2 299 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 FAM193BQ96PV7 902 aaPredicted RBP11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 PAGR1Q9BTK6 254 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 YTHDC2Q9H6S0 1430 aaKnown RBP11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 CCDC160A6NGH7 325 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 DCUN1D2Q6PH85 259 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 MAEAQ7L5Y9 396 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 CCDC186Q7Z3E2 898 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 DCPSQ96C86 337 aaKnown RBP11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 AATFQ9NY61 560 aaKnown RBP eCLIP11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 TBC1D8BQ0IIM8 1120 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 MCM6Q14566 821 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 ZSCAN23Q3MJ62 389 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 OTUD6AQ7L8S5 288 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 KRT25Q7Z3Z0 450 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 NKIRAS1Q9NYS0 192 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 ATP5DP30049 168 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 YWHAEP62258 255 aaKnown RBP11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 PIK3AP1Q6ZUJ8 805 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 SULF1Q8IWU6 871 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms