RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 DBNLQ9UJU6 430 aaKnown RBP7.11□□□□□ -1.27
CUX1-208ENST00000485792 PCDHB15Q9Y5E8 787 aa7.11□□□□□ -1.27
CUX1-208ENST00000485792 CENPFP49454 3210 aa7.11□□□□□ -1.27
CUX1-208ENST00000485792 CASP8AP2Q9UKL3 1982 aa7.11□□□□□ -1.27
CUX1-208ENST00000485792 BAZ2AQ9UIF9 1905 aaKnown RBP7.1□□□□□ -1.27
CUX1-208ENST00000485792 RASSF10A6NK89 507 aa7.1□□□□□ -1.27
CUX1-208ENST00000485792 FAM155AB1AL88 458 aaPredicted RBP7.1□□□□□ -1.27
CUX1-208ENST00000485792 FECHP22830 423 aa7.1□□□□□ -1.27
CUX1-208ENST00000485792 MCAMP43121 646 aa7.1□□□□□ -1.27
CUX1-208ENST00000485792 TIMM10P62072 90 aa7.1□□□□□ -1.27
CUX1-208ENST00000485792 MAP2K5Q13163 448 aa7.1□□□□□ -1.27
CUX1-208ENST00000485792 SLFNL1Q499Z3 407 aa7.1□□□□□ -1.27
CUX1-208ENST00000485792 TAF7LQ5H9L4 462 aa7.1□□□□□ -1.27
CUX1-208ENST00000485792 ANGEL2Q5VTE6 544 aaKnown RBP7.1□□□□□ -1.27
CUX1-208ENST00000485792 CDC37L1Q7L3B6 337 aa7.1□□□□□ -1.27
CUX1-208ENST00000485792 ADGRA1Q86SQ6 560 aa7.1□□□□□ -1.27
CUX1-208ENST00000485792 RNF166Q96A37 237 aaPredicted RBP7.1□□□□□ -1.27
CUX1-208ENST00000485792 EAF2Q96CJ1 260 aaPredicted RBP7.1□□□□□ -1.27
CUX1-208ENST00000485792 KLRG1Q96E93 195 aa7.1□□□□□ -1.27
CUX1-208ENST00000485792 HHIPL1Q96JK4 782 aa7.1□□□□□ -1.27
CUX1-208ENST00000485792 PRMT6Q96LA8 375 aaPredicted RBP7.1□□□□□ -1.27
CUX1-208ENST00000485792 TEPSINQ96N21 525 aa7.1□□□□□ -1.27
CUX1-208ENST00000485792 DBNDD2Q9BQY9 259 aa7.1□□□□□ -1.27
CUX1-208ENST00000485792 MYOZ2Q9NPC6 264 aa7.1□□□□□ -1.27
CUX1-208ENST00000485792 CEP126Q9P2H0 1117 aa7.1□□□□□ -1.27
CUX1-208ENST00000485792 DDX19BQ9UMR2 479 aa7.1□□□□□ -1.27
CUX1-208ENST00000485792 EXOC6BQ9Y2D4 811 aa7.1□□□□□ -1.27
CUX1-208ENST00000485792 SUGT1Q9Y2Z0 365 aa7.1□□□□□ -1.27
CUX1-208ENST00000485792 LOC285556D6RIA3 1793 aa7.1□□□□□ -1.27
CUX1-208ENST00000485792 GREB1LQ9C091 1923 aaPredicted RBP7.09□□□□□ -1.27
CUX1-208ENST00000485792 SALL3Q9BXA9 1300 aa7.09□□□□□ -1.27
CUX1-208ENST00000485792 A0A1B0GUL7 405 aa7.09□□□□□ -1.27
CUX1-208ENST00000485792 TMEM88BA6NKF7 163 aa7.09□□□□□ -1.27
CUX1-208ENST00000485792 F8W031 263 aaPredicted RBP7.09□□□□□ -1.27
CUX1-208ENST00000485792 KCNJ4P48050 445 aa7.09□□□□□ -1.27
CUX1-208ENST00000485792 CACNB3P54284 484 aa7.09□□□□□ -1.27
CUX1-208ENST00000485792 PRSS12P56730 875 aa7.09□□□□□ -1.27
CUX1-208ENST00000485792 DIXDC1Q155Q3 683 aa7.09□□□□□ -1.27
CUX1-208ENST00000485792 ATP2B3Q16720 1220 aa7.09□□□□□ -1.27
CUX1-208ENST00000485792 CCDC102BQ68D86 513 aa7.09□□□□□ -1.27
CUX1-208ENST00000485792 PADI6Q6TGC4 694 aa7.09□□□□□ -1.27
CUX1-208ENST00000485792 RPAP2Q8IXW5 612 aaPredicted RBP7.09□□□□□ -1.27
CUX1-208ENST00000485792 TTC13Q8NBP0 860 aa7.09□□□□□ -1.27
CUX1-208ENST00000485792 OTUD7AQ8TE49 926 aaPredicted RBP7.09□□□□□ -1.27
CUX1-208ENST00000485792 CDCA5Q96FF9 252 aa7.09□□□□□ -1.27
CUX1-208ENST00000485792 ZNF512BQ96KM6 892 aaPredicted RBP7.09□□□□□ -1.27
CUX1-208ENST00000485792 CRBNQ96SW2 442 aa7.09□□□□□ -1.27
CUX1-208ENST00000485792 SERPINA10Q9UK55 444 aa7.09□□□□□ -1.27
CUX1-208ENST00000485792 DOCK3Q8IZD9 2030 aa7.08□□□□□ -1.28
CUX1-208ENST00000485792 CLRN2A0PK11 232 aa7.08□□□□□ -1.28
CUX1-208ENST00000485792 IFIT1P09914 478 aaKnown RBP7.08□□□□□ -1.28
CUX1-208ENST00000485792 ARID4AP29374 1257 aaPredicted RBP7.08□□□□□ -1.28
CUX1-208ENST00000485792 GJA5P36382 358 aa7.08□□□□□ -1.28
CUX1-208ENST00000485792 CAP1Q01518 475 aa7.08□□□□□ -1.28
CUX1-208ENST00000485792 NFIAQ12857 509 aa7.08□□□□□ -1.28
CUX1-208ENST00000485792 TNNI3KQ59H18 835 aa7.08□□□□□ -1.28
CUX1-208ENST00000485792 CAVIN4Q5BKX8 364 aa7.08□□□□□ -1.28
CUX1-208ENST00000485792 MFSD14BQ5SR56 506 aa7.08□□□□□ -1.28
CUX1-208ENST00000485792 APOBEC3HQ6NTF7 200 aaKnown RBP7.08□□□□□ -1.28
CUX1-208ENST00000485792 HHIPL2Q6UWX4 724 aa7.08□□□□□ -1.28
CUX1-208ENST00000485792 SH3BP5LQ7L8J4 393 aa7.08□□□□□ -1.28
CUX1-208ENST00000485792 SAPCD2Q86UD0 394 aa7.08□□□□□ -1.28
CUX1-208ENST00000485792 USP48Q86UV5 1035 aa7.08□□□□□ -1.28
CUX1-208ENST00000485792 FTSJ3Q8IY81 847 aaKnown RBP7.08□□□□□ -1.28
CUX1-208ENST00000485792 TBC1D22AQ8WUA7 517 aa7.08□□□□□ -1.28
CUX1-208ENST00000485792 EDC3Q96F86 508 aaKnown RBP7.08□□□□□ -1.28
CUX1-208ENST00000485792 XAGE2Q96GT9 111 aa7.08□□□□□ -1.28
CUX1-208ENST00000485792 SLC4A5Q9BY07 1137 aa7.08□□□□□ -1.28
CUX1-208ENST00000485792 ANTXR1Q9H6X2 564 aa7.08□□□□□ -1.28
CUX1-208ENST00000485792 SLC24A3Q9HC58 644 aa7.08□□□□□ -1.28
CUX1-208ENST00000485792 PIH1D3Q9NQM4 214 aaKnown RBP7.08□□□□□ -1.28
CUX1-208ENST00000485792 HMG20BQ9P0W2 317 aa7.08□□□□□ -1.28
CUX1-208ENST00000485792 MKRN1Q9UHC7 482 aaKnown RBP7.08□□□□□ -1.28
CUX1-208ENST00000485792 VPS9D1Q9Y2B5 631 aa7.08□□□□□ -1.28
CUX1-208ENST00000485792 AKAP2Q9Y2D5 859 aa7.08□□□□□ -1.28
CUX1-208ENST00000485792 TLL2Q9Y6L7 1015 aa7.08□□□□□ -1.28
CUX1-208ENST00000485792 FPGT-TNNI3KV9GXZ4 949 aa7.08□□□□□ -1.28
CUX1-208ENST00000485792 PARP14Q460N5 1801 aa7.08□□□□□ -1.28
CUX1-208ENST00000485792 GAKO14976 1311 aa7.07□□□□□ -1.28
CUX1-208ENST00000485792 SMIM22K7EJ46 135 aa7.07□□□□□ -1.28
CUX1-208ENST00000485792 IGSF3O75054 1194 aa7.07□□□□□ -1.28
CUX1-208ENST00000485792 SLC5A1P13866 664 aa7.07□□□□□ -1.28
CUX1-208ENST00000485792 VEGFBP49765 207 aa7.07□□□□□ -1.28
CUX1-208ENST00000485792 CHAF1AQ13111 956 aaPredicted RBP7.07□□□□□ -1.28
CUX1-208ENST00000485792 MAP3K11Q16584 847 aa7.07□□□□□ -1.28
CUX1-208ENST00000485792 SHROOM1Q2M3G4 852 aaPredicted RBP7.07□□□□□ -1.28
CUX1-208ENST00000485792 CFAP100Q494V2 611 aa7.07□□□□□ -1.28
CUX1-208ENST00000485792 FKBP1CQ5VVH2 108 aa7.07□□□□□ -1.28
CUX1-208ENST00000485792 TSHZ3Q63HK5 1081 aa7.07□□□□□ -1.28
CUX1-208ENST00000485792 CYP4F22Q6NT55 531 aa7.07□□□□□ -1.28
CUX1-208ENST00000485792 TBC1D9Q6ZT07 1266 aa7.07□□□□□ -1.28
CUX1-208ENST00000485792 ZFPM1Q8IX07 1006 aa7.07□□□□□ -1.28
CUX1-208ENST00000485792 OGFOD1Q8N543 542 aa7.07□□□□□ -1.28
CUX1-208ENST00000485792 KRI1Q8N9T8 703 aaKnown RBP7.07□□□□□ -1.28
CUX1-208ENST00000485792 ZDHHC15Q96MV8 337 aa7.07□□□□□ -1.28
CUX1-208ENST00000485792 ZBED2Q9BTP6 218 aa7.07□□□□□ -1.28
CUX1-208ENST00000485792 DDX4Q9NQI0 724 aaKnown RBP7.07□□□□□ -1.28
CUX1-208ENST00000485792 DAGLAQ9Y4D2 1042 aa7.07□□□□□ -1.28
CUX1-208ENST00000485792 MGAMO43451 1857 aa7.07□□□□□ -1.28
CUX1-208ENST00000485792 TRIM6-TRIM34B2RNG4 842 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms