RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 A0A0D9SFI3 127 aa23.95■■□□□ 1.42
COL6A2-208ENST00000485591 GPAA1O43292 621 aa23.95■■□□□ 1.42
COL6A2-208ENST00000485591 TCP10Q12799 353 aa23.95■■□□□ 1.42
COL6A2-208ENST00000485591 NMIQ13287 307 aaPredicted RBP23.95■■□□□ 1.42
COL6A2-208ENST00000485591 DLK2Q6UY11 383 aa23.95■■□□□ 1.42
COL6A2-208ENST00000485591 FAM227BQ96M60 508 aa23.95■■□□□ 1.42
COL6A2-208ENST00000485591 TEPSINQ96N21 525 aa23.95■■□□□ 1.42
COL6A2-208ENST00000485591 SSC5DA1L4H1 1573 aa23.95■■□□□ 1.42
COL6A2-208ENST00000485591 ATRNL1Q5VV63 1379 aa23.94■■□□□ 1.42
COL6A2-208ENST00000485591 SIPA1L1O43166 1804 aa23.94■■□□□ 1.42
COL6A2-208ENST00000485591 STRBPQ96SI9 672 aaKnown RBP23.94■■□□□ 1.42
COL6A2-208ENST00000485591 OSBPL5Q9H0X9 879 aaPredicted RBP23.94■■□□□ 1.42
COL6A2-208ENST00000485591 PAPPA2Q9BXP8 1791 aa23.93■■□□□ 1.42
COL6A2-208ENST00000485591 USP5P45974 858 aa23.93■■□□□ 1.42
COL6A2-208ENST00000485591 FMR1Q06787 632 aaKnown RBP eCLIP23.93■■□□□ 1.42
COL6A2-208ENST00000485591 PRAMEF18Q5VWM3 479 aa23.93■■□□□ 1.42
COL6A2-208ENST00000485591 MAPKAPK5Q8IW41 473 aa23.93■■□□□ 1.42
COL6A2-208ENST00000485591 ZFPM1Q8IX07 1006 aa23.93■■□□□ 1.42
COL6A2-208ENST00000485591 LAMB1P07942 1786 aa23.93■■□□□ 1.42
COL6A2-208ENST00000485591 GNAT2P19087 354 aa23.92■■□□□ 1.42
COL6A2-208ENST00000485591 MCMDC2Q4G0Z9 681 aa23.92■■□□□ 1.42
COL6A2-208ENST00000485591 CDAN1Q8IWY9 1227 aa23.92■■□□□ 1.42
COL6A2-208ENST00000485591 SDR42E1Q8WUS8 393 aa23.92■■□□□ 1.42
COL6A2-208ENST00000485591 MKRN1Q9UHC7 482 aaKnown RBP23.92■■□□□ 1.42
COL6A2-208ENST00000485591 PRKAB2O43741 272 aa23.91■■□□□ 1.42
COL6A2-208ENST00000485591 CHMLP26374 656 aa23.91■■□□□ 1.42
COL6A2-208ENST00000485591 SUPT20HL1Q3ZLR7 823 aa23.91■■□□□ 1.42
COL6A2-208ENST00000485591 NBPF12Q5TAG4 269 aaPredicted RBP23.91■■□□□ 1.42
COL6A2-208ENST00000485591 ATP8A2Q9NTI2 1148 aa23.91■■□□□ 1.42
COL6A2-208ENST00000485591 SLC4A4Q9Y6R1 1079 aa23.91■■□□□ 1.42
COL6A2-208ENST00000485591 NF2P35240 595 aa23.9■■□□□ 1.42
COL6A2-208ENST00000485591 CWC27Q6UX04 472 aaKnown RBP23.9■■□□□ 1.42
COL6A2-208ENST00000485591 CCDC129Q6ZRS4 1044 aa23.9■■□□□ 1.42
COL6A2-208ENST00000485591 SH3BP5LQ7L8J4 393 aa23.9■■□□□ 1.42
COL6A2-208ENST00000485591 DCP1AQ9NPI6 582 aaPredicted RBP23.9■■□□□ 1.42
COL6A2-208ENST00000485591 CCDC171Q6TFL3 1326 aa23.89■■□□□ 1.42
COL6A2-208ENST00000485591 RAD50Q92878 1312 aa23.89■■□□□ 1.42
COL6A2-208ENST00000485591 OTOFQ9HC10 1997 aa23.89■■□□□ 1.42
COL6A2-208ENST00000485591 DDTLA6NHG4 134 aaPredicted RBP23.89■■□□□ 1.41
COL6A2-208ENST00000485591 CELF2O95319 508 aaKnown RBP23.89■■□□□ 1.41
COL6A2-208ENST00000485591 C1QTNF8P60827 252 aa23.89■■□□□ 1.41
COL6A2-208ENST00000485591 ZSCAN29Q8IWY8 852 aaPredicted RBP23.89■■□□□ 1.41
COL6A2-208ENST00000485591 HOOK2Q96ED9 719 aa23.89■■□□□ 1.41
COL6A2-208ENST00000485591 DHX36Q9H2U1 1008 aaKnown RBP23.89■■□□□ 1.41
COL6A2-208ENST00000485591 ZNF408Q9H9D4 720 aa23.89■■□□□ 1.41
COL6A2-208ENST00000485591 MFAP1P55081 439 aaKnown RBP23.88■■□□□ 1.41
COL6A2-208ENST00000485591 CST9Q5W186 159 aa23.88■■□□□ 1.41
COL6A2-208ENST00000485591 ZNF589Q86UQ0 364 aaPredicted RBP23.88■■□□□ 1.41
COL6A2-208ENST00000485591 RUFY2Q8WXA3 655 aa23.88■■□□□ 1.41
COL6A2-208ENST00000485591 CSRNP1Q96S65 589 aa23.88■■□□□ 1.41
COL6A2-208ENST00000485591 GSG1L2A8MUP6 293 aa23.87■■□□□ 1.41
COL6A2-208ENST00000485591 GIMAP6Q6P9H5 292 aa23.87■■□□□ 1.41
COL6A2-208ENST00000485591 DDRGK1Q96HY6 314 aa23.87■■□□□ 1.41
COL6A2-208ENST00000485591 SAP30BPQ9UHR5 308 aaKnown RBP23.87■■□□□ 1.41
COL6A2-208ENST00000485591 PATL2C9JE40 543 aaKnown RBP23.86■■□□□ 1.41
COL6A2-208ENST00000485591 CDC45O75419 566 aa23.86■■□□□ 1.41
COL6A2-208ENST00000485591 FKBP1BP68106 108 aa23.86■■□□□ 1.41
COL6A2-208ENST00000485591 MCM9Q9NXL9 1143 aa23.86■■□□□ 1.41
COL6A2-208ENST00000485591 PALD1Q9ULE6 856 aa23.86■■□□□ 1.41
COL6A2-208ENST00000485591 APLP1P51693 650 aa23.85■■□□□ 1.41
COL6A2-208ENST00000485591 DCAF15Q66K64 600 aa23.85■■□□□ 1.41
COL6A2-208ENST00000485591 IL25Q9H293 177 aa23.85■■□□□ 1.41
COL6A2-208ENST00000485591 GBA2Q9HCG7 927 aaPredicted RBP23.85■■□□□ 1.41
COL6A2-208ENST00000485591 EPB41L4AQ9HCS5 686 aaPredicted RBP23.85■■□□□ 1.41
COL6A2-208ENST00000485591 LAMA4Q16363 1823 aa23.84■■□□□ 1.41
COL6A2-208ENST00000485591 MYH8P13535 1937 aa23.84■■□□□ 1.41
COL6A2-208ENST00000485591 TMEM88BA6NKF7 163 aa23.84■■□□□ 1.41
COL6A2-208ENST00000485591 FOXP2O15409 715 aa23.84■■□□□ 1.41
COL6A2-208ENST00000485591 HLA-DOAP06340 250 aa23.84■■□□□ 1.41
COL6A2-208ENST00000485591 NACAP1Q9BZK3 213 aa23.84■■□□□ 1.41
COL6A2-208ENST00000485591 PI4KBQ9UBF8 816 aa23.84■■□□□ 1.41
COL6A2-208ENST00000485591 ARPP21Q9UBL0 812 aaPredicted RBP23.84■■□□□ 1.41
COL6A2-208ENST00000485591 SGSM2O43147 1006 aa23.83■■□□□ 1.41
COL6A2-208ENST00000485591 PPP1R12BO60237 982 aaPredicted RBP23.83■■□□□ 1.41
COL6A2-208ENST00000485591 APPP05067 770 aa23.83■■□□□ 1.41
COL6A2-208ENST00000485591 MAP3K10Q02779 954 aa23.83■■□□□ 1.41
COL6A2-208ENST00000485591 VPS53Q5VIR6 699 aa23.83■■□□□ 1.41
COL6A2-208ENST00000485591 TTC6Q86TZ1 520 aa23.83■■□□□ 1.41
COL6A2-208ENST00000485591 IFNL3Q8IZI9 196 aa23.83■■□□□ 1.41
COL6A2-208ENST00000485591 C2orf69Q8N8R5 385 aa23.83■■□□□ 1.41
COL6A2-208ENST00000485591 EHD4Q9H223 541 aa23.83■■□□□ 1.41
COL6A2-208ENST00000485591 TBC1D12O60347 775 aa23.82■■□□□ 1.4
COL6A2-208ENST00000485591 POLR3DP05423 398 aaPredicted RBP23.82■■□□□ 1.4
COL6A2-208ENST00000485591 HSPD1P10809 573 aaKnown RBP23.82■■□□□ 1.4
COL6A2-208ENST00000485591 TDO2P48775 406 aa23.82■■□□□ 1.4
COL6A2-208ENST00000485591 MAP3K11Q16584 847 aa23.82■■□□□ 1.4
COL6A2-208ENST00000485591 CASC1Q6TDU7 716 aa23.82■■□□□ 1.4
COL6A2-208ENST00000485591 AMOTL1Q8IY63 956 aa23.82■■□□□ 1.4
COL6A2-208ENST00000485591 CREBZFQ9NS37 354 aa23.82■■□□□ 1.4
COL6A2-208ENST00000485591 ATAD5Q96QE3 1844 aa23.82■■□□□ 1.4
COL6A2-208ENST00000485591 ZMYM6O95789 1325 aa23.82■■□□□ 1.4
COL6A2-208ENST00000485591 DOCK1Q14185 1865 aa23.81■■□□□ 1.4
COL6A2-208ENST00000485591 USP17L12C9JPN9 530 aa23.81■■□□□ 1.4
COL6A2-208ENST00000485591 USP17L21D6R901 530 aa23.81■■□□□ 1.4
COL6A2-208ENST00000485591 PRKG1Q13976 671 aa23.81■■□□□ 1.4
COL6A2-208ENST00000485591 TTLL12Q14166 644 aaPredicted RBP23.81■■□□□ 1.4
COL6A2-208ENST00000485591 SLC4A8Q2Y0W8 1093 aa23.81■■□□□ 1.4
COL6A2-208ENST00000485591 SBK1Q52WX2 424 aa23.81■■□□□ 1.4
COL6A2-208ENST00000485591 ARMC9Q7Z3E5 817 aa23.81■■□□□ 1.4
COL6A2-208ENST00000485591 METTL16Q86W50 562 aaKnown RBP23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms