RNA–Protein interactions for RNA: ENST00000485560.5

ZNF248-206, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best)

Gene ZNF248, Length 1,705 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-206ENST00000485560 MCM9Q9NXL9 1143 aa19.15■□□□□ 0.66
ZNF248-206ENST00000485560 SHTN1A0MZ66 631 aa19.14■□□□□ 0.66
ZNF248-206ENST00000485560 WDHD1O75717 1129 aaPredicted RBP19.14■□□□□ 0.66
ZNF248-206ENST00000485560 RPS12P25398 132 aaKnown RBP19.14■□□□□ 0.66
ZNF248-206ENST00000485560 FLT1P17948 1338 aa19.14■□□□□ 0.65
ZNF248-206ENST00000485560 GMPSP49915 693 aaPredicted RBP19.14■□□□□ 0.65
ZNF248-206ENST00000485560 EVX2Q03828 476 aa19.14■□□□□ 0.65
ZNF248-206ENST00000485560 C9orf131Q5VYM1 1079 aa19.14■□□□□ 0.65
ZNF248-206ENST00000485560 BLOC1S2Q6QNY1 142 aa19.14■□□□□ 0.65
ZNF248-206ENST00000485560 RUFY3Q7L099 469 aa19.14■□□□□ 0.65
ZNF248-206ENST00000485560 ARPP21Q9UBL0 812 aaPredicted RBP19.14■□□□□ 0.65
ZNF248-206ENST00000485560 CYP46A1Q9Y6A2 500 aa19.14■□□□□ 0.65
ZNF248-206ENST00000485560 TACC3Q9Y6A5 838 aa19.14■□□□□ 0.65
ZNF248-206ENST00000485560 CYP2D6P10635 497 aa19.13■□□□□ 0.65
ZNF248-206ENST00000485560 PICALMQ13492 652 aa19.13■□□□□ 0.65
ZNF248-206ENST00000485560 DLGAP5Q15398 846 aa19.13■□□□□ 0.65
ZNF248-206ENST00000485560 SLC4A8Q2Y0W8 1093 aa19.13■□□□□ 0.65
ZNF248-206ENST00000485560 SBK1Q52WX2 424 aa19.13■□□□□ 0.65
ZNF248-206ENST00000485560 STK11IPQ8N1F8 1099 aa19.13■□□□□ 0.65
ZNF248-206ENST00000485560 SNX21Q969T3 373 aa19.13■□□□□ 0.65
ZNF248-206ENST00000485560 TBC1D2Q9BYX2 928 aa19.13■□□□□ 0.65
ZNF248-206ENST00000485560 TDRD3Q9H7E2 651 aaKnown RBP19.13■□□□□ 0.65
ZNF248-206ENST00000485560 DDX4Q9NQI0 724 aaKnown RBP19.13■□□□□ 0.65
ZNF248-206ENST00000485560 INCENPQ9NQS7 918 aa19.13■□□□□ 0.65
ZNF248-206ENST00000485560 ANAPC4Q9UJX5 808 aa19.13■□□□□ 0.65
ZNF248-206ENST00000485560 SPDYE2BA6NHP3 402 aa19.12■□□□□ 0.65
ZNF248-206ENST00000485560 ST18O60284 1047 aa19.12■□□□□ 0.65
ZNF248-206ENST00000485560 GRIN3BO60391 1043 aa19.12■□□□□ 0.65
ZNF248-206ENST00000485560 SPDYE6P0CI01 402 aa19.12■□□□□ 0.65
ZNF248-206ENST00000485560 CACNB3P54284 484 aa19.12■□□□□ 0.65
ZNF248-206ENST00000485560 DPF2Q92785 391 aa19.12■□□□□ 0.65
ZNF248-206ENST00000485560 TTC14Q96N46 770 aa19.12■□□□□ 0.65
ZNF248-206ENST00000485560 IPO9Q96P70 1041 aaKnown RBP19.12■□□□□ 0.65
ZNF248-206ENST00000485560 SAP30BPQ9UHR5 308 aaKnown RBP19.12■□□□□ 0.65
ZNF248-206ENST00000485560 RPS6KB1P23443 525 aa19.11■□□□□ 0.65
ZNF248-206ENST00000485560 ZNF280AP59817 542 aaPredicted RBP19.11■□□□□ 0.65
ZNF248-206ENST00000485560 NFIAQ12857 509 aa19.11■□□□□ 0.65
ZNF248-206ENST00000485560 AKNAD1Q5T1N1 836 aa19.11■□□□□ 0.65
ZNF248-206ENST00000485560 C12orf60Q5U649 245 aa19.11■□□□□ 0.65
ZNF248-206ENST00000485560 MTMR14Q8NCE2 650 aa19.11■□□□□ 0.65
ZNF248-206ENST00000485560 TCEANC2Q96MN5 208 aa19.11■□□□□ 0.65
ZNF248-206ENST00000485560 NEDD4P46934 1319 aa19.11■□□□□ 0.65
ZNF248-206ENST00000485560 MICALL2Q8IY33 904 aa19.11■□□□□ 0.65
ZNF248-206ENST00000485560 GPC2Q8N158 579 aa19.11■□□□□ 0.65
ZNF248-206ENST00000485560 NCOA7Q8NI08 942 aa19.11■□□□□ 0.65
ZNF248-206ENST00000485560 NKX2-3Q8TAU0 364 aa19.11■□□□□ 0.65
ZNF248-206ENST00000485560 STAG1Q8WVM7 1258 aa19.11■□□□□ 0.65
ZNF248-206ENST00000485560 MYOZ2Q9NPC6 264 aa19.11■□□□□ 0.65
ZNF248-206ENST00000485560 PDRG1Q9NUG6 133 aa19.11■□□□□ 0.65
ZNF248-206ENST00000485560 CNOT7Q9UIV1 285 aaKnown RBP19.11■□□□□ 0.65
ZNF248-206ENST00000485560 POLR3DP05423 398 aaPredicted RBP19.1■□□□□ 0.65
ZNF248-206ENST00000485560 MFSD6Q6ZSS7 791 aa19.1■□□□□ 0.65
ZNF248-206ENST00000485560 HSCBQ8IWL3 235 aa19.1■□□□□ 0.65
ZNF248-206ENST00000485560 ZBED3Q96IU2 234 aaPredicted RBP19.1■□□□□ 0.65
ZNF248-206ENST00000485560 IDI2Q9BXS1 227 aa19.1■□□□□ 0.65
ZNF248-206ENST00000485560 HMGB1P09429 215 aaKnown RBP19.09■□□□□ 0.65
ZNF248-206ENST00000485560 SLC4A3P48751 1232 aa19.09■□□□□ 0.65
ZNF248-206ENST00000485560 MMP14P50281 582 aa19.09■□□□□ 0.65
ZNF248-206ENST00000485560 PLCD1P51178 756 aa19.09■□□□□ 0.65
ZNF248-206ENST00000485560 BECN1Q14457 450 aa19.09■□□□□ 0.65
ZNF248-206ENST00000485560 DHX32Q7L7V1 743 aaKnown RBP19.09■□□□□ 0.65
ZNF248-206ENST00000485560 RALYLQ86SE5 291 aaKnown RBP19.09■□□□□ 0.65
ZNF248-206ENST00000485560 MB21D2Q8IYB1 491 aaPredicted RBP19.09■□□□□ 0.65
ZNF248-206ENST00000485560 B4E1Z4 1266 aa19.08■□□□□ 0.65
ZNF248-206ENST00000485560 EGFRP00533 1210 aa19.08■□□□□ 0.65
ZNF248-206ENST00000485560 AK2P54819 239 aa19.08■□□□□ 0.65
ZNF248-206ENST00000485560 TRDNQ13061 729 aa19.08■□□□□ 0.65
ZNF248-206ENST00000485560 CHST3Q7LGC8 479 aa19.08■□□□□ 0.65
ZNF248-206ENST00000485560 AMOTL1Q8IY63 956 aa19.08■□□□□ 0.65
ZNF248-206ENST00000485560 IL27Q8NEV9 243 aa19.08■□□□□ 0.65
ZNF248-206ENST00000485560 OSBPL5Q9H0X9 879 aaPredicted RBP19.08■□□□□ 0.65
ZNF248-206ENST00000485560 FAM198AQ9UFP1 575 aa19.08■□□□□ 0.65
ZNF248-206ENST00000485560 MYH8P13535 1937 aa19.08■□□□□ 0.64
ZNF248-206ENST00000485560 CLRN2A0PK11 232 aa19.08■□□□□ 0.64
ZNF248-206ENST00000485560 WNT10BO00744 389 aa19.08■□□□□ 0.64
ZNF248-206ENST00000485560 DDNO94850 711 aaPredicted RBP19.08■□□□□ 0.64
ZNF248-206ENST00000485560 EXOSC10Q01780 885 aaKnown RBP19.08■□□□□ 0.64
ZNF248-206ENST00000485560 TCP10Q12799 353 aa19.08■□□□□ 0.64
ZNF248-206ENST00000485560 NBPF9Q3BBW0 867 aa19.08■□□□□ 0.64
ZNF248-206ENST00000485560 RBM26Q5T8P6 1007 aaKnown RBP19.08■□□□□ 0.64
ZNF248-206ENST00000485560 SAMD7Q7Z3H4 446 aa19.08■□□□□ 0.64
ZNF248-206ENST00000485560 ZFPM1Q8IX07 1006 aa19.08■□□□□ 0.64
ZNF248-206ENST00000485560 RNF41Q9H4P4 317 aaPredicted RBP19.08■□□□□ 0.64
ZNF248-206ENST00000485560 ZNF70Q9UC06 446 aaPredicted RBP19.08■□□□□ 0.64
ZNF248-206ENST00000485560 SIPA1L1O43166 1804 aa19.07■□□□□ 0.64
ZNF248-206ENST00000485560 FGRP09769 529 aa19.07■□□□□ 0.64
ZNF248-206ENST00000485560 SPDYE2Q495Y8 402 aa19.07■□□□□ 0.64
ZNF248-206ENST00000485560 RRP12Q5JTH9 1297 aaKnown RBP19.07■□□□□ 0.64
ZNF248-206ENST00000485560 NOL8Q76FK4 1167 aaKnown RBP19.07■□□□□ 0.64
ZNF248-206ENST00000485560 DYNLL2Q96FJ2 89 aa19.07■□□□□ 0.64
ZNF248-206ENST00000485560 LRRC2Q9BYS8 371 aa19.07■□□□□ 0.64
ZNF248-206ENST00000485560 CNNM2Q9H8M5 875 aa19.07■□□□□ 0.64
ZNF248-206ENST00000485560 TOMM22Q9NS69 142 aa19.07■□□□□ 0.64
ZNF248-206ENST00000485560 GPRC5DQ9NZD1 345 aa19.07■□□□□ 0.64
ZNF248-206ENST00000485560 ROBO3Q96MS0 1386 aa19.07■□□□□ 0.64
ZNF248-206ENST00000485560 K7ELQ4 463 aaPredicted RBP19.06■□□□□ 0.64
ZNF248-206ENST00000485560 NPM3O75607 178 aaKnown RBP19.06■□□□□ 0.64
ZNF248-206ENST00000485560 SLC3A2P08195 630 aaKnown RBP19.06■□□□□ 0.64
ZNF248-206ENST00000485560 ANTXR2P58335 489 aa19.06■□□□□ 0.64
ZNF248-206ENST00000485560 CYB5R4Q7L1T6 521 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms