RNA–Protein interactions for RNA: ENST00000484879.1

RB1-204, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-204ENST00000484879 B4GALNT3Q6L9W6 998 aa8□□□□□ -1.13
RB1-204ENST00000484879 PHLDB3Q6NSJ2 640 aa8□□□□□ -1.13
RB1-204ENST00000484879 SYDE1Q6ZW31 735 aaPredicted RBP8□□□□□ -1.13
RB1-204ENST00000484879 GTF3C2Q8WUA4 911 aaPredicted RBP8□□□□□ -1.13
RB1-204ENST00000484879 LIN37Q96GY3 246 aaPredicted RBP8□□□□□ -1.13
RB1-204ENST00000484879 DUSP23Q9BVJ7 150 aa8□□□□□ -1.13
RB1-204ENST00000484879 ZNF576Q9H609 170 aa8□□□□□ -1.13
RB1-204ENST00000484879 LMCD1Q9NZU5 365 aa8□□□□□ -1.13
RB1-204ENST00000484879 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.99□□□□□ -1.13
RB1-204ENST00000484879 POLR3DP05423 398 aaPredicted RBP7.99□□□□□ -1.13
RB1-204ENST00000484879 ITPKAP23677 461 aa7.99□□□□□ -1.13
RB1-204ENST00000484879 AMIGO3Q86WK7 504 aa7.99□□□□□ -1.13
RB1-204ENST00000484879 PCOLCE2Q9UKZ9 415 aa7.99□□□□□ -1.13
RB1-204ENST00000484879 CTNND2Q9UQB3 1225 aa7.99□□□□□ -1.13
RB1-204ENST00000484879 LEFTY1O75610 366 aa7.98□□□□□ -1.13
RB1-204ENST00000484879 FAM13AO94988 1023 aa7.98□□□□□ -1.13
RB1-204ENST00000484879 GJD3Q8N144 294 aa7.98□□□□□ -1.13
RB1-204ENST00000484879 DISC1Q9NRI5 854 aa7.98□□□□□ -1.13
RB1-204ENST00000484879 GLI1P08151 1106 aa7.97□□□□□ -1.13
RB1-204ENST00000484879 LIG1P18858 919 aa7.97□□□□□ -1.13
RB1-204ENST00000484879 BUD31P41223 144 aaPredicted RBP7.97□□□□□ -1.13
RB1-204ENST00000484879 PTPN12Q05209 780 aaKnown RBP7.97□□□□□ -1.13
RB1-204ENST00000484879 ZP2Q05996 745 aa7.97□□□□□ -1.13
RB1-204ENST00000484879 KIAA0319Q5VV43 1072 aa7.97□□□□□ -1.13
RB1-204ENST00000484879 PRDM7Q9NQW5 492 aa7.97□□□□□ -1.13
RB1-204ENST00000484879 NFIBO00712 420 aa7.96□□□□□ -1.14
RB1-204ENST00000484879 IKZF1Q13422 519 aa7.96□□□□□ -1.14
RB1-204ENST00000484879 ECM1Q16610 540 aa7.96□□□□□ -1.14
RB1-204ENST00000484879 KRTAP17-1Q9BYP8 105 aa7.96□□□□□ -1.14
RB1-204ENST00000484879 CCDC86Q9H6F5 360 aaKnown RBP7.96□□□□□ -1.14
RB1-204ENST00000484879 FZD6O60353 706 aa7.95□□□□□ -1.14
RB1-204ENST00000484879 RNGTTO60942 597 aaKnown RBP7.95□□□□□ -1.14
RB1-204ENST00000484879 C1QTNF9P0C862 333 aa7.95□□□□□ -1.14
RB1-204ENST00000484879 ITIH2P19823 946 aa7.95□□□□□ -1.14
RB1-204ENST00000484879 KIF4BQ2VIQ3 1234 aa7.95□□□□□ -1.14
RB1-204ENST00000484879 MPZL3Q6UWV2 235 aa7.95□□□□□ -1.14
RB1-204ENST00000484879 WDR89Q96FK6 387 aaPredicted RBP7.95□□□□□ -1.14
RB1-204ENST00000484879 TRAIPQ9BWF2 469 aa7.95□□□□□ -1.14
RB1-204ENST00000484879 KRT82Q9NSB4 513 aa7.95□□□□□ -1.14
RB1-204ENST00000484879 BRD1O95696 1058 aa7.94□□□□□ -1.14
RB1-204ENST00000484879 KRT1P04264 644 aa7.94□□□□□ -1.14
RB1-204ENST00000484879 TTLL4Q14679 1199 aa7.94□□□□□ -1.14
RB1-204ENST00000484879 RPS26P11Q5JNZ5 115 aaPredicted RBP7.94□□□□□ -1.14
RB1-204ENST00000484879 PRR23BQ6ZRT6 265 aa7.94□□□□□ -1.14
RB1-204ENST00000484879 MTMR7Q9Y216 660 aa7.94□□□□□ -1.14
RB1-204ENST00000484879 PCDHGC5Q9Y5F6 944 aa7.94□□□□□ -1.14
RB1-204ENST00000484879 IGF2BP3O00425 579 aaKnown RBP eCLIP7.93□□□□□ -1.14
RB1-204ENST00000484879 ZNF862O60290 1169 aa7.93□□□□□ -1.14
RB1-204ENST00000484879 MTMR3Q13615 1198 aa7.93□□□□□ -1.14
RB1-204ENST00000484879 TMEM67Q5HYA8 995 aa7.93□□□□□ -1.14
RB1-204ENST00000484879 FYB2Q5VWT5 728 aa7.93□□□□□ -1.14
RB1-204ENST00000484879 FBXO15Q8NCQ5 510 aaPredicted RBP7.93□□□□□ -1.14
RB1-204ENST00000484879 KIRREL1Q96J84 757 aa7.93□□□□□ -1.14
RB1-204ENST00000484879 GTF2IRD1Q9UHL9 959 aa7.93□□□□□ -1.14
RB1-204ENST00000484879 HCLS1P14317 486 aaPredicted RBP7.92□□□□□ -1.14
RB1-204ENST00000484879 TOP6BLQ8N6T0 577 aa7.92□□□□□ -1.14
RB1-204ENST00000484879 HEXIM2Q96MH2 286 aaKnown RBP7.92□□□□□ -1.14
RB1-204ENST00000484879 NEFLP07196 543 aa7.91□□□□□ -1.14
RB1-204ENST00000484879 SF3B2Q13435 895 aaKnown RBP7.91□□□□□ -1.14
RB1-204ENST00000484879 CYFIP1Q7L576 1253 aa7.91□□□□□ -1.14
RB1-204ENST00000484879 FAM214BQ7L5A3 538 aa7.91□□□□□ -1.14
RB1-204ENST00000484879 SPACA3Q8IXA5 215 aa7.91□□□□□ -1.14
RB1-204ENST00000484879 EHD4Q9H223 541 aa7.91□□□□□ -1.14
RB1-204ENST00000484879 TXNDC2Q86VQ3 553 aa7.9□□□□□ -1.14
RB1-204ENST00000484879 SSU72Q9NP77 194 aaKnown RBP7.9□□□□□ -1.14
RB1-204ENST00000484879 GSTP1P09211 210 aaKnown RBP7.89□□□□□ -1.15
RB1-204ENST00000484879 CLCN7P51798 805 aa7.89□□□□□ -1.15
RB1-204ENST00000484879 CTSWP56202 376 aa7.89□□□□□ -1.15
RB1-204ENST00000484879 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.89□□□□□ -1.15
RB1-204ENST00000484879 ZC3H12CQ9C0D7 883 aaKnown RBP7.89□□□□□ -1.15
RB1-204ENST00000484879 CCDC87Q9NVE4 849 aa7.89□□□□□ -1.15
RB1-204ENST00000484879 EGFL7Q9UHF1 273 aa7.89□□□□□ -1.15
RB1-204ENST00000484879 NPIPB6E9PJ23 425 aa7.88□□□□□ -1.15
RB1-204ENST00000484879 NEFMP07197 916 aa7.88□□□□□ -1.15
RB1-204ENST00000484879 INHBBP09529 407 aa7.88□□□□□ -1.15
RB1-204ENST00000484879 TMEM253P0C7T8 217 aa7.88□□□□□ -1.15
RB1-204ENST00000484879 PDIA4P13667 645 aaKnown RBP7.88□□□□□ -1.15
RB1-204ENST00000484879 FKBP4Q02790 459 aaKnown RBP eCLIP7.88□□□□□ -1.15
RB1-204ENST00000484879 ISL2Q96A47 359 aa7.88□□□□□ -1.15
RB1-204ENST00000484879 GNEQ9Y223 722 aaKnown RBP7.88□□□□□ -1.15
RB1-204ENST00000484879 PITPNM2Q9BZ72 1349 aa7.87□□□□□ -1.15
RB1-204ENST00000484879 NKPD1Q17RQ9 610 aa7.87□□□□□ -1.15
RB1-204ENST00000484879 PRPF40BQ6NWY9 871 aaKnown RBP7.87□□□□□ -1.15
RB1-204ENST00000484879 CD320Q9NPF0 282 aa7.87□□□□□ -1.15
RB1-204ENST00000484879 GDNFP39905 211 aa7.86□□□□□ -1.15
RB1-204ENST00000484879 ERVK-24P63145 666 aa7.86□□□□□ -1.15
RB1-204ENST00000484879 KCNA1Q09470 495 aa7.86□□□□□ -1.15
RB1-204ENST00000484879 KCNA10Q16322 511 aa7.86□□□□□ -1.15
RB1-204ENST00000484879 CIAPIN1Q6FI81 312 aa7.86□□□□□ -1.15
RB1-204ENST00000484879 RNF214Q8ND24 703 aa7.86□□□□□ -1.15
RB1-204ENST00000484879 ABCB6Q9NP58 842 aa7.86□□□□□ -1.15
RB1-204ENST00000484879 GNAT3A8MTJ3 354 aa7.85□□□□□ -1.15
RB1-204ENST00000484879 MED14OSP0DP75 135 aa7.85□□□□□ -1.15
RB1-204ENST00000484879 CCDC120Q96HB5 630 aa7.85□□□□□ -1.15
RB1-204ENST00000484879 NSUN3Q9H649 340 aaKnown RBP7.85□□□□□ -1.15
RB1-204ENST00000484879 PRDM10Q9NQV6 1147 aa7.85□□□□□ -1.15
RB1-204ENST00000484879 TMEM238LA0A1B0GVL6 79 aa7.84□□□□□ -1.15
RB1-204ENST00000484879 PATL2C9JE40 543 aaKnown RBP7.84□□□□□ -1.15
RB1-204ENST00000484879 SERPINB4P48594 390 aa7.84□□□□□ -1.15
RB1-204ENST00000484879 ZC3H12AQ5D1E8 599 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms