RNA–Protein interactions for RNA: ENST00000484879.1

RB1-204, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-204ENST00000484879 AEBP2Q6ZN18 517 aaPredicted RBP32.23■■■□□ 2.75
RB1-204ENST00000484879 CHIC1Q5VXU3 224 aa30.33■■■□□ 2.45
RB1-204ENST00000484879 SENP3Q9H4L4 574 aaPredicted RBP27.66■■■□□ 2.02
RB1-204ENST00000484879 PHF23Q9BUL5 403 aaPredicted RBP27.2■■□□□ 1.94
RB1-204ENST00000484879 FOXD1Q16676 465 aa25.74■■□□□ 1.71
RB1-204ENST00000484879 MSH5O43196 834 aa24.33■■□□□ 1.49
RB1-204ENST00000484879 POTEDQ86YR6 584 aa24.26■■□□□ 1.47
RB1-204ENST00000484879 PLPPR3Q6T4P5 718 aa24.11■■□□□ 1.45
RB1-204ENST00000484879 PIAS4Q8N2W9 510 aaPredicted RBP23.99■■□□□ 1.43
RB1-204ENST00000484879 PPP6R1Q9UPN7 881 aa23.76■■□□□ 1.39
RB1-204ENST00000484879 ADRA2BP18089 450 aa23.67■■□□□ 1.38
RB1-204ENST00000484879 DMRT2Q9Y5R5 561 aa21.86■■□□□ 1.09
RB1-204ENST00000484879 MAPK8IP2Q13387 824 aaPredicted RBP21.83■■□□□ 1.09
RB1-204ENST00000484879 SCAF1Q9H7N4 1312 aaKnown RBP21.8■■□□□ 1.08
RB1-204ENST00000484879 CACNB1Q02641 598 aaPredicted RBP21.04■□□□□ 0.96
RB1-204ENST00000484879 PPP4R3CPQ6ZMV5 832 aa21.03■□□□□ 0.96
RB1-204ENST00000484879 DCAF8L1A6NGE4 600 aa20.92■□□□□ 0.94
RB1-204ENST00000484879 HOXD11P31277 338 aaPredicted RBP20.92■□□□□ 0.94
RB1-204ENST00000484879 CNKSR2Q8WXI2 1034 aa20.77■□□□□ 0.92
RB1-204ENST00000484879 RNF216Q9NWF9 866 aaPredicted RBP20.69■□□□□ 0.9
RB1-204ENST00000484879 RNF39Q9H2S5 420 aa20.68■□□□□ 0.9
RB1-204ENST00000484879 C1QBPQ07021 282 aaKnown RBP20.41■□□□□ 0.86
RB1-204ENST00000484879 DNAJC5BQ9UF47 199 aa20.37■□□□□ 0.85
RB1-204ENST00000484879 NCBP3Q53F19 620 aaKnown RBP20.19■□□□□ 0.82
RB1-204ENST00000484879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.92■□□□□ 0.78
RB1-204ENST00000484879 NPM3O75607 178 aaKnown RBP19.81■□□□□ 0.76
RB1-204ENST00000484879 U3KPZ7 1027 aaPredicted RBP19.43■□□□□ 0.7
RB1-204ENST00000484879 CAPN15O75808 1086 aa19.24■□□□□ 0.67
RB1-204ENST00000484879 DSG3P32926 999 aa19.23■□□□□ 0.67
RB1-204ENST00000484879 SPINK5Q9NQ38 1064 aaPredicted RBP19.22■□□□□ 0.67
RB1-204ENST00000484879 KCNA4P22459 653 aa19.09■□□□□ 0.65
RB1-204ENST00000484879 SLC4A2P04920 1241 aa19.01■□□□□ 0.63
RB1-204ENST00000484879 APLP2Q06481 763 aa18.98■□□□□ 0.63
RB1-204ENST00000484879 POTEHQ6S545 545 aa18.96■□□□□ 0.63
RB1-204ENST00000484879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.87■□□□□ 0.61
RB1-204ENST00000484879 HNRNPUL2Q1KMD3 747 aaKnown RBP18.87■□□□□ 0.61
RB1-204ENST00000484879 ZNF219Q9P2Y4 722 aaPredicted RBP18.87■□□□□ 0.61
RB1-204ENST00000484879 TRHP20396 242 aaPredicted RBP18.83■□□□□ 0.6
RB1-204ENST00000484879 ABCB7O75027 752 aa18.71■□□□□ 0.59
RB1-204ENST00000484879 SAMD1Q6SPF0 538 aaPredicted RBP18.71■□□□□ 0.59
RB1-204ENST00000484879 RBM42Q9BTD8 480 aaKnown RBP18.44■□□□□ 0.54
RB1-204ENST00000484879 MYCNP04198 464 aaPredicted RBP18.38■□□□□ 0.53
RB1-204ENST00000484879 POLA2Q14181 598 aa18.27■□□□□ 0.52
RB1-204ENST00000484879 CHRDL2Q6WN34 429 aa18.12■□□□□ 0.49
RB1-204ENST00000484879 SLC4A1APQ9BWU0 796 aaKnown RBP17.99■□□□□ 0.47
RB1-204ENST00000484879 FOXD4L1Q9NU39 408 aa17.98■□□□□ 0.47
RB1-204ENST00000484879 ZBTB12Q9Y330 459 aaPredicted RBP17.96■□□□□ 0.47
RB1-204ENST00000484879 AKT1S1Q96B36 256 aa17.91■□□□□ 0.46
RB1-204ENST00000484879 ATF5Q9Y2D1 282 aaPredicted RBP17.88■□□□□ 0.45
RB1-204ENST00000484879 REM2Q8IYK8 340 aaPredicted RBP17.7■□□□□ 0.42
RB1-204ENST00000484879 OSCARQ8IYS5 282 aa17.67■□□□□ 0.42
RB1-204ENST00000484879 SP7Q8TDD2 431 aaPredicted RBP17.62■□□□□ 0.41
RB1-204ENST00000484879 PIP4P2Q8N4L2 257 aa17.58■□□□□ 0.4
RB1-204ENST00000484879 ATXN8OSP0DMR3 200 aa17.53■□□□□ 0.4
RB1-204ENST00000484879 ZBTB22O15209 634 aa17.51■□□□□ 0.39
RB1-204ENST00000484879 PITPNM1O00562 1244 aa17.49■□□□□ 0.39
RB1-204ENST00000484879 FXR2P51116 673 aaKnown RBP eCLIP17.45■□□□□ 0.38
RB1-204ENST00000484879 HAX1O00165 279 aa17.38■□□□□ 0.37
RB1-204ENST00000484879 SPDYE2BA6NHP3 402 aa17.35■□□□□ 0.37
RB1-204ENST00000484879 SPDYE6P0CI01 402 aa17.35■□□□□ 0.37
RB1-204ENST00000484879 SPDYE2Q495Y8 402 aa17.35■□□□□ 0.37
RB1-204ENST00000484879 FBLN2P98095 1184 aa17.33■□□□□ 0.36
RB1-204ENST00000484879 SPDYE1Q8NFV5 336 aaPredicted RBP17.13■□□□□ 0.33
RB1-204ENST00000484879 MKRN4PQ13434 485 aaPredicted RBP17.07■□□□□ 0.32
RB1-204ENST00000484879 EVX2Q03828 476 aa17.06■□□□□ 0.32
RB1-204ENST00000484879 PRKAR2AP13861 404 aaKnown RBP17.05■□□□□ 0.32
RB1-204ENST00000484879 CLEC11AQ9Y240 323 aa17.05■□□□□ 0.32
RB1-204ENST00000484879 ZNF692Q9BU19 519 aaPredicted RBP17.04■□□□□ 0.32
RB1-204ENST00000484879 SSUH2Q9Y2M2 353 aa17.04■□□□□ 0.32
RB1-204ENST00000484879 C19orf67A6NJJ6 358 aa16.9■□□□□ 0.3
RB1-204ENST00000484879 PRR29P0C7W0 189 aa16.77■□□□□ 0.28
RB1-204ENST00000484879 PABPN1Q86U42 306 aaKnown RBP eCLIP16.76■□□□□ 0.27
RB1-204ENST00000484879 GABBR2O75899 941 aa16.72■□□□□ 0.27
RB1-204ENST00000484879 CHADLQ6NUI6 762 aa16.72■□□□□ 0.27
RB1-204ENST00000484879 LHX8Q68G74 356 aa16.52■□□□□ 0.24
RB1-204ENST00000484879 FARP1Q9Y4F1 1045 aaPredicted RBP16.52■□□□□ 0.24
RB1-204ENST00000484879 CD44P16070 742 aaKnown RBP16.49■□□□□ 0.23
RB1-204ENST00000484879 CLCN6P51797 869 aa16.49■□□□□ 0.23
RB1-204ENST00000484879 CSRNP3Q8WYN3 585 aa16.41■□□□□ 0.22
RB1-204ENST00000484879 POTEIP0CG38 1075 aa16.32■□□□□ 0.2
RB1-204ENST00000484879 STAG3Q9UJ98 1225 aa16.32■□□□□ 0.2
RB1-204ENST00000484879 ZNF579Q8NAF0 562 aaKnown RBP16.25■□□□□ 0.19
RB1-204ENST00000484879 DCBLD2Q96PD2 775 aa16.23■□□□□ 0.19
RB1-204ENST00000484879 CREBZFQ9NS37 354 aa16.23■□□□□ 0.19
RB1-204ENST00000484879 ZRANB1Q9UGI0 708 aa16.19■□□□□ 0.18
RB1-204ENST00000484879 SPDYE4A6NLX3 237 aa16.13■□□□□ 0.17
RB1-204ENST00000484879 PAK3O75914 559 aaPredicted RBP16.05■□□□□ 0.16
RB1-204ENST00000484879 GALR2O43603 387 aaPredicted RBP16.01■□□□□ 0.15
RB1-204ENST00000484879 NPM1P06748 294 aaKnown RBP eCLIP15.99■□□□□ 0.15
RB1-204ENST00000484879 EHMT2Q96KQ7 1210 aa15.96■□□□□ 0.15
RB1-204ENST00000484879 PHF12Q96QT6 1004 aa15.91■□□□□ 0.14
RB1-204ENST00000484879 MNX1P50219 401 aaPredicted RBP15.9■□□□□ 0.14
RB1-204ENST00000484879 OTUD5Q96G74 571 aa15.82■□□□□ 0.12
RB1-204ENST00000484879 POTEB2H3BUK9 544 aa15.77■□□□□ 0.12
RB1-204ENST00000484879 PELP1Q8IZL8 1130 aaKnown RBP15.73■□□□□ 0.11
RB1-204ENST00000484879 ASTLQ6HA08 431 aaPredicted RBP15.72■□□□□ 0.11
RB1-204ENST00000484879 PROM2Q8N271 834 aa15.7■□□□□ 0.1
RB1-204ENST00000484879 PLSCR2Q9NRY7 297 aa15.7■□□□□ 0.1
RB1-204ENST00000484879 MS4A3Q96HJ5 214 aa15.69■□□□□ 0.1
RB1-204ENST00000484879 C7P10643 843 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms