RNA–Protein interactions for RNA: ENST00000484078.5

SUPT20H-217, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 1,876 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-217ENST00000484078 NBPF6Q5VWK0 638 aa7.42□□□□□ -1.22
SUPT20H-217ENST00000484078 NXPE4Q6UWF7 544 aa7.42□□□□□ -1.22
SUPT20H-217ENST00000484078 FAM177A1Q8N128 213 aaPredicted RBP7.42□□□□□ -1.22
SUPT20H-217ENST00000484078 NBPF4Q96M43 638 aa7.42□□□□□ -1.22
SUPT20H-217ENST00000484078 BCL11AQ9H165 835 aa7.42□□□□□ -1.22
SUPT20H-217ENST00000484078 ZFYVE28Q9HCC9 887 aa7.42□□□□□ -1.22
SUPT20H-217ENST00000484078 HCN2Q9UL51 889 aa7.42□□□□□ -1.22
SUPT20H-217ENST00000484078 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.42□□□□□ -1.22
SUPT20H-217ENST00000484078 RGPD1P0DJD0 1748 aa7.42□□□□□ -1.22
SUPT20H-217ENST00000484078 LRRC37A3O60309 1634 aa7.42□□□□□ -1.22
SUPT20H-217ENST00000484078 A0A1W2PNR3 127 aa7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 TRIM37O94972 964 aa7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 FGD1P98174 961 aa7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 MARCH10Q8NA82 808 aaPredicted RBP7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 DNAJC2Q99543 621 aaKnown RBP7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 RUBCNLQ9H714 662 aa7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 C12orf49Q9H741 205 aa7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 CCSER2Q9H7U1 834 aa7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 SRA1Q9HD15 236 aaKnown RBP7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 LATS2Q9NRM7 1088 aa7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 DDX41Q9UJV9 622 aaKnown RBP7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 EP400Q96L91 3159 aa7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 CYP2E1P05181 493 aaPredicted RBP7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 THBS1P07996 1170 aa7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 EIF4BP23588 611 aaKnown RBP7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 BAG6P46379 1132 aa7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 GRIN2CQ14957 1233 aa7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 CC2D1BQ5T0F9 858 aaKnown RBP7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 XKR5Q6UX68 686 aa7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 LYSMD3Q7Z3D4 306 aa7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 DEFB132Q7Z7B7 95 aa7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 SNX29Q8TEQ0 813 aa7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 DHX38Q92620 1227 aaKnown RBP7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 COPRSQ9NQ92 184 aa7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 SPG7Q9UQ90 795 aa7.41□□□□□ -1.22
SUPT20H-217ENST00000484078 OVOS2A0A0G2JMS6 1433 aa7.4□□□□□ -1.23
SUPT20H-217ENST00000484078 F6X3S4 739 aa7.4□□□□□ -1.23
SUPT20H-217ENST00000484078 MRPL14Q6P1L8 145 aaKnown RBP7.4□□□□□ -1.23
SUPT20H-217ENST00000484078 USHBP1Q8N6Y0 703 aa7.4□□□□□ -1.23
SUPT20H-217ENST00000484078 TTC16Q8NEE8 873 aa7.4□□□□□ -1.23
SUPT20H-217ENST00000484078 UBXN4Q92575 508 aa7.4□□□□□ -1.23
SUPT20H-217ENST00000484078 TANGO6Q9C0B7 1094 aa7.4□□□□□ -1.23
SUPT20H-217ENST00000484078 TIMMDC1Q9NPL8 285 aa7.4□□□□□ -1.23
SUPT20H-217ENST00000484078 NPC1L1Q9UHC9 1359 aa7.4□□□□□ -1.23
SUPT20H-217ENST00000484078 TNS2Q63HR2 1409 aa7.39□□□□□ -1.23
SUPT20H-217ENST00000484078 PHACTR2O75167 634 aa7.39□□□□□ -1.23
SUPT20H-217ENST00000484078 XYLBO75191 536 aa7.39□□□□□ -1.23
SUPT20H-217ENST00000484078 USP17L7P0C7H9 530 aa7.39□□□□□ -1.23
SUPT20H-217ENST00000484078 PRR20EP86478 221 aa7.39□□□□□ -1.23
SUPT20H-217ENST00000484078 PRR20CP86479 221 aa7.39□□□□□ -1.23
SUPT20H-217ENST00000484078 PRR20DP86480 221 aa7.39□□□□□ -1.23
SUPT20H-217ENST00000484078 PRR20BP86481 221 aa7.39□□□□□ -1.23
SUPT20H-217ENST00000484078 PRR20AP86496 221 aa7.39□□□□□ -1.23
SUPT20H-217ENST00000484078 CNGB1Q14028 1251 aaPredicted RBP7.39□□□□□ -1.23
SUPT20H-217ENST00000484078 PDE12Q6L8Q7 609 aaKnown RBP7.39□□□□□ -1.23
SUPT20H-217ENST00000484078 ZCRB1Q8TBF4 217 aaKnown RBP7.39□□□□□ -1.23
SUPT20H-217ENST00000484078 RAPGEF4Q8WZA2 1011 aa7.39□□□□□ -1.23
SUPT20H-217ENST00000484078 PRKAG2Q9UGJ0 569 aa7.39□□□□□ -1.23
SUPT20H-217ENST00000484078 TNS1Q9HBL0 1735 aaKnown RBP7.39□□□□□ -1.23
SUPT20H-217ENST00000484078 APBA3O96018 575 aa7.38□□□□□ -1.23
SUPT20H-217ENST00000484078 EIF4A2Q14240 407 aaKnown RBP7.38□□□□□ -1.23
SUPT20H-217ENST00000484078 TRIM46Q7Z4K8 759 aa7.38□□□□□ -1.23
SUPT20H-217ENST00000484078 DDX54Q8TDD1 881 aaKnown RBP7.38□□□□□ -1.23
SUPT20H-217ENST00000484078 CEP63Q96MT8 703 aa7.38□□□□□ -1.23
SUPT20H-217ENST00000484078 FAM13BQ9NYF5 915 aa7.38□□□□□ -1.23
SUPT20H-217ENST00000484078 KANSL3Q9P2N6 904 aa7.38□□□□□ -1.23
SUPT20H-217ENST00000484078 BCL9O00512 1426 aa7.38□□□□□ -1.23
SUPT20H-217ENST00000484078 TTLL8A6PVC2 850 aa7.38□□□□□ -1.23
SUPT20H-217ENST00000484078 SMARCA5O60264 1052 aaPredicted RBP7.38□□□□□ -1.23
SUPT20H-217ENST00000484078 DNAJA1P31689 397 aaKnown RBP7.38□□□□□ -1.23
SUPT20H-217ENST00000484078 MTHFSP49914 203 aa7.38□□□□□ -1.23
SUPT20H-217ENST00000484078 SF3A1Q15459 793 aaKnown RBP7.38□□□□□ -1.23
SUPT20H-217ENST00000484078 USP48Q86UV5 1035 aa7.38□□□□□ -1.23
SUPT20H-217ENST00000484078 BCO2Q9BYV7 579 aa7.38□□□□□ -1.23
SUPT20H-217ENST00000484078 A0A1B0GTH6 734 aa7.37□□□□□ -1.23
SUPT20H-217ENST00000484078 GRM2Q14416 872 aa7.37□□□□□ -1.23
SUPT20H-217ENST00000484078 PEAR1Q5VY43 1037 aaPredicted RBP7.37□□□□□ -1.23
SUPT20H-217ENST00000484078 GLIS3Q8NEA6 775 aa7.37□□□□□ -1.23
SUPT20H-217ENST00000484078 TRIM56Q9BRZ2 755 aaKnown RBP7.37□□□□□ -1.23
SUPT20H-217ENST00000484078 GGT7Q9UJ14 662 aa7.37□□□□□ -1.23
SUPT20H-217ENST00000484078 DNMT3LQ9UJW3 386 aa7.37□□□□□ -1.23
SUPT20H-217ENST00000484078 MEGF6O75095 1541 aa7.37□□□□□ -1.23
SUPT20H-217ENST00000484078 RPLP1P05386 114 aaKnown RBP7.36□□□□□ -1.23
SUPT20H-217ENST00000484078 EZH2Q15910 746 aaKnown RBP7.36□□□□□ -1.23
SUPT20H-217ENST00000484078 HIF1AQ16665 826 aa7.36□□□□□ -1.23
SUPT20H-217ENST00000484078 ACSBG1Q96GR2 724 aa7.36□□□□□ -1.23
SUPT20H-217ENST00000484078 CAMKK2Q96RR4 588 aa7.36□□□□□ -1.23
SUPT20H-217ENST00000484078 BRD7Q9NPI1 651 aa7.36□□□□□ -1.23
SUPT20H-217ENST00000484078 ANKIB1Q9P2G1 1089 aa7.36□□□□□ -1.23
SUPT20H-217ENST00000484078 SHANK3Q9BYB0 1731 aa7.36□□□□□ -1.23
SUPT20H-217ENST00000484078 KCNQ2O43526 872 aa7.36□□□□□ -1.23
SUPT20H-217ENST00000484078 UPP2O95045 317 aa7.36□□□□□ -1.23
SUPT20H-217ENST00000484078 ACPPP15309 386 aa7.36□□□□□ -1.23
SUPT20H-217ENST00000484078 C1QTNF8P60827 252 aa7.36□□□□□ -1.23
SUPT20H-217ENST00000484078 PTPN12Q05209 780 aaKnown RBP7.36□□□□□ -1.23
SUPT20H-217ENST00000484078 DPH6Q7L8W6 267 aa7.36□□□□□ -1.23
SUPT20H-217ENST00000484078 PTF1AQ7RTS3 328 aa7.36□□□□□ -1.23
SUPT20H-217ENST00000484078 KRT25Q7Z3Z0 450 aa7.36□□□□□ -1.23
SUPT20H-217ENST00000484078 ABI2Q9NYB9 513 aaPredicted RBP7.36□□□□□ -1.23
SUPT20H-217ENST00000484078 GPC6Q9Y625 555 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms