RNA–Protein interactions for RNA: ENST00000483031.1

RPA3-207, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 641 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-207ENST00000483031 KCNMB1Q16558 191 aa6.9□□□□□ -1.3
RPA3-207ENST00000483031 SSU72Q9NP77 194 aaKnown RBP6.9□□□□□ -1.3
RPA3-207ENST00000483031 TRAK1Q9UPV9 953 aa6.9□□□□□ -1.3
RPA3-207ENST00000483031 SNX11Q9Y5W9 270 aa6.9□□□□□ -1.3
RPA3-207ENST00000483031 TMEM238LA0A1B0GVL6 79 aa6.89□□□□□ -1.31
RPA3-207ENST00000483031 NDUFB5O43674 189 aa6.89□□□□□ -1.31
RPA3-207ENST00000483031 GADD45BO75293 160 aaPredicted RBP6.89□□□□□ -1.31
RPA3-207ENST00000483031 FAAP100Q0VG06 881 aa6.89□□□□□ -1.31
RPA3-207ENST00000483031 PDE3BQ13370 1112 aa6.89□□□□□ -1.31
RPA3-207ENST00000483031 ORC1Q13415 861 aa6.89□□□□□ -1.31
RPA3-207ENST00000483031 MLANAQ16655 118 aa6.89□□□□□ -1.31
RPA3-207ENST00000483031 TOP6BLQ8N6T0 577 aa6.89□□□□□ -1.31
RPA3-207ENST00000483031 ASB11Q8WXH4 323 aa6.89□□□□□ -1.31
RPA3-207ENST00000483031 TOX2Q96NM4 488 aa6.89□□□□□ -1.31
RPA3-207ENST00000483031 TNKS2Q9H2K2 1166 aa6.89□□□□□ -1.31
RPA3-207ENST00000483031 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.89□□□□□ -1.31
RPA3-207ENST00000483031 EGFL7Q9UHF1 273 aa6.89□□□□□ -1.31
RPA3-207ENST00000483031 ICMTO60725 284 aa6.88□□□□□ -1.31
RPA3-207ENST00000483031 PPP1R15AO75807 674 aaPredicted RBP6.88□□□□□ -1.31
RPA3-207ENST00000483031 RAP1GAPP47736 663 aa6.88□□□□□ -1.31
RPA3-207ENST00000483031 PPP2R3AQ06190 1150 aa6.88□□□□□ -1.31
RPA3-207ENST00000483031 IKZF1Q13422 519 aa6.88□□□□□ -1.31
RPA3-207ENST00000483031 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.88□□□□□ -1.31
RPA3-207ENST00000483031 CCDC82Q8N4S0 544 aa6.88□□□□□ -1.31
RPA3-207ENST00000483031 PRDM7Q9NQW5 492 aa6.88□□□□□ -1.31
RPA3-207ENST00000483031 CARNS1A5YM72 827 aa6.87□□□□□ -1.31
RPA3-207ENST00000483031 NEFMP07197 916 aa6.87□□□□□ -1.31
RPA3-207ENST00000483031 ZP2Q05996 745 aa6.87□□□□□ -1.31
RPA3-207ENST00000483031 GLYCTKQ8IVS8 523 aa6.87□□□□□ -1.31
RPA3-207ENST00000483031 KCNB2Q92953 911 aa6.87□□□□□ -1.31
RPA3-207ENST00000483031 ISL2Q96A47 359 aa6.87□□□□□ -1.31
RPA3-207ENST00000483031 CCDC74AQ96AQ1 378 aa6.87□□□□□ -1.31
RPA3-207ENST00000483031 PPP1R16BQ96T49 567 aa6.87□□□□□ -1.31
RPA3-207ENST00000483031 C1orf115Q9H7X2 142 aa6.87□□□□□ -1.31
RPA3-207ENST00000483031 GTF2IRD1Q9UHL9 959 aa6.87□□□□□ -1.31
RPA3-207ENST00000483031 GPN3Q9UHW5 284 aaPredicted RBP6.87□□□□□ -1.31
RPA3-207ENST00000483031 ZNF503-AS2A6NEH8 195 aa6.86□□□□□ -1.31
RPA3-207ENST00000483031 H3BRB1 525 aa6.86□□□□□ -1.31
RPA3-207ENST00000483031 ZSCAN18Q8TBC5 510 aaPredicted RBP6.86□□□□□ -1.31
RPA3-207ENST00000483031 DNAJC25Q9H1X3 360 aa6.86□□□□□ -1.31
RPA3-207ENST00000483031 TUT1Q9H6E5 874 aaKnown RBP6.86□□□□□ -1.31
RPA3-207ENST00000483031 TMEM39AQ9NV64 488 aa6.86□□□□□ -1.31
RPA3-207ENST00000483031 TSPAN15O95858 294 aa6.85□□□□□ -1.31
RPA3-207ENST00000483031 GRM2Q14416 872 aa6.85□□□□□ -1.31
RPA3-207ENST00000483031 DTHD1Q6ZMT9 781 aa6.85□□□□□ -1.31
RPA3-207ENST00000483031 RNF214Q8ND24 703 aa6.85□□□□□ -1.31
RPA3-207ENST00000483031 HEXIM2Q96MH2 286 aaKnown RBP6.85□□□□□ -1.31
RPA3-207ENST00000483031 FAM129BQ96TA1 746 aa6.85□□□□□ -1.31
RPA3-207ENST00000483031 KRTAP4-11Q9BYQ6 195 aa6.85□□□□□ -1.31
RPA3-207ENST00000483031 CCDC180Q9P1Z9 1646 aa6.84□□□□□ -1.31
RPA3-207ENST00000483031 IGF2BP3O00425 579 aaKnown RBP eCLIP6.84□□□□□ -1.31
RPA3-207ENST00000483031 EIF1AYO14602 144 aaKnown RBP6.84□□□□□ -1.31
RPA3-207ENST00000483031 CFPP27918 469 aa6.84□□□□□ -1.31
RPA3-207ENST00000483031 AFMP43652 599 aa6.84□□□□□ -1.31
RPA3-207ENST00000483031 ERVK-24P63145 666 aa6.84□□□□□ -1.31
RPA3-207ENST00000483031 ECM1Q16610 540 aa6.84□□□□□ -1.31
RPA3-207ENST00000483031 PDZD3Q86UT5 571 aa6.84□□□□□ -1.31
RPA3-207ENST00000483031 CILP2Q8IUL8 1156 aa6.84□□□□□ -1.31
RPA3-207ENST00000483031 LIN37Q96GY3 246 aaPredicted RBP6.84□□□□□ -1.31
RPA3-207ENST00000483031 CITED4Q96RK1 184 aa6.84□□□□□ -1.31
RPA3-207ENST00000483031 CTNND2Q9UQB3 1225 aa6.84□□□□□ -1.31
RPA3-207ENST00000483031 KRTAP9-7A8MTY7 169 aa6.83□□□□□ -1.32
RPA3-207ENST00000483031 ZC3H12AQ5D1E8 599 aaKnown RBP6.83□□□□□ -1.32
RPA3-207ENST00000483031 B4GALNT3Q6L9W6 998 aa6.83□□□□□ -1.32
RPA3-207ENST00000483031 SULF2Q8IWU5 870 aa6.83□□□□□ -1.32
RPA3-207ENST00000483031 PPP4R2Q9NY27 417 aa6.83□□□□□ -1.32
RPA3-207ENST00000483031 GNAT3A8MTJ3 354 aa6.82□□□□□ -1.32
RPA3-207ENST00000483031 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.82□□□□□ -1.32
RPA3-207ENST00000483031 FCGRTP55899 365 aa6.82□□□□□ -1.32
RPA3-207ENST00000483031 FAM214BQ7L5A3 538 aa6.82□□□□□ -1.32
RPA3-207ENST00000483031 ANKLE2Q86XL3 938 aa6.82□□□□□ -1.32
RPA3-207ENST00000483031 SPACA3Q8IXA5 215 aa6.82□□□□□ -1.32
RPA3-207ENST00000483031 LRRC56Q8IYG6 542 aaPredicted RBP6.82□□□□□ -1.32
RPA3-207ENST00000483031 NIF3L1Q9GZT8 377 aa6.82□□□□□ -1.32
RPA3-207ENST00000483031 PRDM10Q9NQV6 1147 aa6.82□□□□□ -1.32
RPA3-207ENST00000483031 GLI1P08151 1106 aa6.81□□□□□ -1.32
RPA3-207ENST00000483031 ZNF865P0CJ78 1059 aaPredicted RBP6.81□□□□□ -1.32
RPA3-207ENST00000483031 XRCC5P13010 732 aaKnown RBP6.81□□□□□ -1.32
RPA3-207ENST00000483031 CLCN7P51798 805 aa6.81□□□□□ -1.32
RPA3-207ENST00000483031 ARHGAP4P98171 946 aa6.81□□□□□ -1.32
RPA3-207ENST00000483031 MAP1SQ66K74 1059 aaPredicted RBP6.81□□□□□ -1.32
RPA3-207ENST00000483031 MPZL3Q6UWV2 235 aa6.81□□□□□ -1.32
RPA3-207ENST00000483031 SYDE1Q6ZW31 735 aaPredicted RBP6.81□□□□□ -1.32
RPA3-207ENST00000483031 TMC1Q8TDI8 760 aa6.81□□□□□ -1.32
RPA3-207ENST00000483031 EMILIN2Q9BXX0 1053 aa6.81□□□□□ -1.32
RPA3-207ENST00000483031 LMCD1Q9NZU5 365 aa6.81□□□□□ -1.32
RPA3-207ENST00000483031 GPR182O15218 404 aa6.8□□□□□ -1.32
RPA3-207ENST00000483031 ARNTP27540 789 aa6.8□□□□□ -1.32
RPA3-207ENST00000483031 NKPD1Q17RQ9 610 aa6.8□□□□□ -1.32
RPA3-207ENST00000483031 FYB2Q5VWT5 728 aa6.8□□□□□ -1.32
RPA3-207ENST00000483031 C1QL4Q86Z23 238 aa6.8□□□□□ -1.32
RPA3-207ENST00000483031 SIAH1Q8IUQ4 282 aa6.8□□□□□ -1.32
RPA3-207ENST00000483031 EPS8L3Q8TE67 593 aaKnown RBP6.8□□□□□ -1.32
RPA3-207ENST00000483031 ACSBG1Q96GR2 724 aa6.8□□□□□ -1.32
RPA3-207ENST00000483031 KIRREL1Q96J84 757 aa6.8□□□□□ -1.32
RPA3-207ENST00000483031 PICK1Q9NRD5 415 aa6.8□□□□□ -1.32
RPA3-207ENST00000483031 GTF3C3Q9Y5Q9 886 aa6.8□□□□□ -1.32
RPA3-207ENST00000483031 PITPNM2Q9BZ72 1349 aa6.79□□□□□ -1.32
RPA3-207ENST00000483031 NME2P22392 152 aa6.79□□□□□ -1.32
RPA3-207ENST00000483031 SERPINB4P48594 390 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms