RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 SHC4Q6S5L8 630 aa14.22□□□□□ -0.13
CCDC78-213ENST00000482878 DPF2Q92785 391 aa14.22□□□□□ -0.13
CCDC78-213ENST00000482878 AKAP2Q9Y2D5 859 aa14.22□□□□□ -0.13
CCDC78-213ENST00000482878 TJP1Q07157 1748 aa14.22□□□□□ -0.13
CCDC78-213ENST00000482878 ACTN2P35609 894 aa14.22□□□□□ -0.13
CCDC78-213ENST00000482878 CCDC93Q567U6 631 aa14.22□□□□□ -0.13
CCDC78-213ENST00000482878 PACS2Q86VP3 889 aa14.22□□□□□ -0.13
CCDC78-213ENST00000482878 VPS37DQ86XT2 251 aa14.22□□□□□ -0.13
CCDC78-213ENST00000482878 ZCRB1Q8TBF4 217 aaKnown RBP14.22□□□□□ -0.13
CCDC78-213ENST00000482878 ALG1Q9BT22 464 aa14.22□□□□□ -0.13
CCDC78-213ENST00000482878 IKBKBO14920 756 aa14.21□□□□□ -0.13
CCDC78-213ENST00000482878 FAM89AQ96GI7 184 aa14.21□□□□□ -0.13
CCDC78-213ENST00000482878 ISCA1Q9BUE6 129 aa14.21□□□□□ -0.13
CCDC78-213ENST00000482878 SENP2Q9HC62 589 aa14.21□□□□□ -0.13
CCDC78-213ENST00000482878 RNF216Q9NWF9 866 aaPredicted RBP14.21□□□□□ -0.13
CCDC78-213ENST00000482878 TUBE1Q9UJT0 475 aa14.21□□□□□ -0.13
CCDC78-213ENST00000482878 COL18A1P39060 1754 aa14.21□□□□□ -0.13
CCDC78-213ENST00000482878 SASH3O75995 380 aa14.21□□□□□ -0.13
CCDC78-213ENST00000482878 KCNJ6P48051 423 aa14.21□□□□□ -0.13
CCDC78-213ENST00000482878 PTPN21Q16825 1174 aa14.21□□□□□ -0.13
CCDC78-213ENST00000482878 CYB5R4Q7L1T6 521 aa14.21□□□□□ -0.13
CCDC78-213ENST00000482878 TBC1D10CQ8IV04 446 aa14.21□□□□□ -0.13
CCDC78-213ENST00000482878 PHKBQ93100 1093 aa14.21□□□□□ -0.13
CCDC78-213ENST00000482878 ACSBG1Q96GR2 724 aa14.21□□□□□ -0.13
CCDC78-213ENST00000482878 HPSEQ9Y251 543 aa14.21□□□□□ -0.13
CCDC78-213ENST00000482878 CPDO75976 1380 aa14.21□□□□□ -0.14
CCDC78-213ENST00000482878 IVLP07476 585 aa14.21□□□□□ -0.14
CCDC78-213ENST00000482878 PNOCQ13519 176 aa14.21□□□□□ -0.14
CCDC78-213ENST00000482878 MCM6Q14566 821 aa14.21□□□□□ -0.14
CCDC78-213ENST00000482878 CDC27P30260 824 aa14.2□□□□□ -0.14
CCDC78-213ENST00000482878 PSEN1P49768 467 aa14.2□□□□□ -0.14
CCDC78-213ENST00000482878 PTPAQ15257 358 aa14.2□□□□□ -0.14
CCDC78-213ENST00000482878 KRT40Q6A162 431 aa14.2□□□□□ -0.14
CCDC78-213ENST00000482878 CLIC6Q96NY7 704 aa14.2□□□□□ -0.14
CCDC78-213ENST00000482878 ANGEL1Q9UNK9 670 aaKnown RBP14.2□□□□□ -0.14
CCDC78-213ENST00000482878 ZMYM6O95789 1325 aa14.2□□□□□ -0.14
CCDC78-213ENST00000482878 MCAMP43121 646 aa14.2□□□□□ -0.14
CCDC78-213ENST00000482878 METAP2P50579 478 aaKnown RBP eCLIP14.2□□□□□ -0.14
CCDC78-213ENST00000482878 ZSWIM4Q9H7M6 989 aa14.2□□□□□ -0.14
CCDC78-213ENST00000482878 ZNF142P52746 1687 aaPredicted RBP14.2□□□□□ -0.14
CCDC78-213ENST00000482878 SPEF2Q9C093 1822 aa14.2□□□□□ -0.14
CCDC78-213ENST00000482878 TPM1P09493 284 aa14.2□□□□□ -0.14
CCDC78-213ENST00000482878 GOLGA8FQ08AF8 430 aa14.2□□□□□ -0.14
CCDC78-213ENST00000482878 GOLGA8DPQ0D2H9 430 aa14.2□□□□□ -0.14
CCDC78-213ENST00000482878 SYNE4Q8N205 404 aa14.2□□□□□ -0.14
CCDC78-213ENST00000482878 LAMB4A4D0S4 1761 aa14.19□□□□□ -0.14
CCDC78-213ENST00000482878 UBE2Q2LH0YL09 131 aa14.19□□□□□ -0.14
CCDC78-213ENST00000482878 TBC1D8O95759 1140 aa14.19□□□□□ -0.14
CCDC78-213ENST00000482878 MAGEA9P43362 315 aa14.19□□□□□ -0.14
CCDC78-213ENST00000482878 UBASH3AP57075 661 aa14.19□□□□□ -0.14
CCDC78-213ENST00000482878 TCIRG1Q13488 830 aa14.19□□□□□ -0.14
CCDC78-213ENST00000482878 EXOC4Q96A65 974 aa14.19□□□□□ -0.14
CCDC78-213ENST00000482878 MAP3K14Q99558 947 aa14.19□□□□□ -0.14
CCDC78-213ENST00000482878 PLEKHG2Q9H7P9 1386 aa14.19□□□□□ -0.14
CCDC78-213ENST00000482878 WDR19Q8NEZ3 1342 aa14.19□□□□□ -0.14
CCDC78-213ENST00000482878 SERPINC1P01008 464 aa14.19□□□□□ -0.14
CCDC78-213ENST00000482878 TRDNQ13061 729 aa14.19□□□□□ -0.14
CCDC78-213ENST00000482878 CC2D1AQ6P1N0 951 aaPredicted RBP14.19□□□□□ -0.14
CCDC78-213ENST00000482878 FOXP4Q8IVH2 680 aaPredicted RBP14.19□□□□□ -0.14
CCDC78-213ENST00000482878 TMOD3Q9NYL9 352 aa14.19□□□□□ -0.14
CCDC78-213ENST00000482878 PKD1L3Q7Z443 1732 aa14.19□□□□□ -0.14
CCDC78-213ENST00000482878 ZNF335Q9H4Z2 1342 aaPredicted RBP14.19□□□□□ -0.14
CCDC78-213ENST00000482878 EIF3CLB5ME19 914 aaKnown RBP14.18□□□□□ -0.14
CCDC78-213ENST00000482878 SH2B2O14492 632 aaPredicted RBP14.18□□□□□ -0.14
CCDC78-213ENST00000482878 FANCGO15287 622 aa14.18□□□□□ -0.14
CCDC78-213ENST00000482878 PPP6R2O75170 966 aa14.18□□□□□ -0.14
CCDC78-213ENST00000482878 ETF1P62495 437 aaKnown RBP14.18□□□□□ -0.14
CCDC78-213ENST00000482878 MYL5Q02045 173 aa14.18□□□□□ -0.14
CCDC78-213ENST00000482878 MICU3Q86XE3 530 aa14.18□□□□□ -0.14
CCDC78-213ENST00000482878 EIF3CQ99613 913 aaKnown RBP14.18□□□□□ -0.14
CCDC78-213ENST00000482878 TBC1D2BQ9UPU7 963 aa14.18□□□□□ -0.14
CCDC78-213ENST00000482878 NUP188Q5SRE5 1749 aa14.18□□□□□ -0.14
CCDC78-213ENST00000482878 TMEM232C9JQI7 657 aa14.18□□□□□ -0.14
CCDC78-213ENST00000482878 ADD2P35612 726 aa14.18□□□□□ -0.14
CCDC78-213ENST00000482878 IFIT5Q13325 482 aaKnown RBP14.18□□□□□ -0.14
CCDC78-213ENST00000482878 CFAP100Q494V2 611 aa14.18□□□□□ -0.14
CCDC78-213ENST00000482878 SLC9C2Q5TAH2 1124 aa14.18□□□□□ -0.14
CCDC78-213ENST00000482878 APOA5Q6Q788 366 aa14.18□□□□□ -0.14
CCDC78-213ENST00000482878 METTL16Q86W50 562 aaKnown RBP14.18□□□□□ -0.14
CCDC78-213ENST00000482878 PLEKHA4Q9H4M7 779 aa14.18□□□□□ -0.14
CCDC78-213ENST00000482878 FBXO3Q9UK99 471 aa14.18□□□□□ -0.14
CCDC78-213ENST00000482878 PCDH11XQ9BZA7 1347 aa14.18□□□□□ -0.14
CCDC78-213ENST00000482878 PCDH11YQ9BZA8 1340 aa14.18□□□□□ -0.14
CCDC78-213ENST00000482878 KCPQ6ZWJ8 1503 aa14.18□□□□□ -0.14
CCDC78-213ENST00000482878 B4E1Z4 1266 aa14.18□□□□□ -0.14
CCDC78-213ENST00000482878 ERVV-2B6SEH9 535 aa14.18□□□□□ -0.14
CCDC78-213ENST00000482878 MMP14P50281 582 aa14.18□□□□□ -0.14
CCDC78-213ENST00000482878 LONRF3Q496Y0 759 aa14.18□□□□□ -0.14
CCDC78-213ENST00000482878 HELBQ8NG08 1087 aaPredicted RBP14.18□□□□□ -0.14
CCDC78-213ENST00000482878 MYL10Q9BUA6 226 aa14.18□□□□□ -0.14
CCDC78-213ENST00000482878 INCENPQ9NQS7 918 aa14.18□□□□□ -0.14
CCDC78-213ENST00000482878 BTG4Q9NY30 223 aa14.18□□□□□ -0.14
CCDC78-213ENST00000482878 ATP2B1P20020 1258 aa14.17□□□□□ -0.14
CCDC78-213ENST00000482878 CT47A1Q5JQC4 288 aaPredicted RBP14.17□□□□□ -0.14
CCDC78-213ENST00000482878 RESP18Q5W5W9 173 aa14.17□□□□□ -0.14
CCDC78-213ENST00000482878 FOXR1Q6PIV2 292 aa14.17□□□□□ -0.14
CCDC78-213ENST00000482878 TRIM65Q6PJ69 517 aa14.17□□□□□ -0.14
CCDC78-213ENST00000482878 CCDC91Q7Z6B0 441 aa14.17□□□□□ -0.14
CCDC78-213ENST00000482878 REXO1L1PQ8IX06 675 aa14.17□□□□□ -0.14
CCDC78-213ENST00000482878 PHACTR2O75167 634 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms