RNA–Protein interactions for RNA: ENST00000482785.1

SHQ1-208, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 3

Gene SHQ1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-208ENST00000482785 C2orf69Q8N8R5 385 aa5.36□□□□□ -1.55
SHQ1-208ENST00000482785 ANKS1AQ92625 1134 aa5.36□□□□□ -1.55
SHQ1-208ENST00000482785 ZNF277Q9NRM2 450 aaPredicted RBP5.36□□□□□ -1.55
SHQ1-208ENST00000482785 SEPT3Q9UH03 358 aa5.36□□□□□ -1.55
SHQ1-208ENST00000482785 PTCH2Q9Y6C5 1203 aa5.36□□□□□ -1.55
SHQ1-208ENST00000482785 ZNF609O15014 1411 aa5.36□□□□□ -1.55
SHQ1-208ENST00000482785 MYOM3Q5VTT5 1437 aa5.36□□□□□ -1.55
SHQ1-208ENST00000482785 ANKRD26Q9UPS8 1709 aa5.36□□□□□ -1.55
SHQ1-208ENST00000482785 KDM3BQ7LBC6 1761 aa5.36□□□□□ -1.55
SHQ1-208ENST00000482785 ITGB4P16144 1822 aa5.36□□□□□ -1.55
SHQ1-208ENST00000482785 CACNA1HO95180 2353 aa5.36□□□□□ -1.55
SHQ1-208ENST00000482785 GVINP1Q7Z2Y8 2422 aa5.36□□□□□ -1.55
SHQ1-208ENST00000482785 MYO18BQ8IUG5 2567 aa5.36□□□□□ -1.55
SHQ1-208ENST00000482785 ABCA12Q86UK0 2595 aa5.35□□□□□ -1.55
SHQ1-208ENST00000482785 H0YIN7 160 aa5.35□□□□□ -1.55
SHQ1-208ENST00000482785 SCAMP3O14828 347 aaKnown RBP5.35□□□□□ -1.55
SHQ1-208ENST00000482785 FAM13AO94988 1023 aa5.35□□□□□ -1.55
SHQ1-208ENST00000482785 NPR3P17342 541 aa5.35□□□□□ -1.55
SHQ1-208ENST00000482785 ERCC5P28715 1186 aaPredicted RBP5.35□□□□□ -1.55
SHQ1-208ENST00000482785 TM4SF4P48230 202 aa5.35□□□□□ -1.55
SHQ1-208ENST00000482785 MRPL58Q14197 206 aaKnown RBP5.35□□□□□ -1.55
SHQ1-208ENST00000482785 CDC37L1Q7L3B6 337 aa5.35□□□□□ -1.55
SHQ1-208ENST00000482785 USP48Q86UV5 1035 aa5.35□□□□□ -1.55
SHQ1-208ENST00000482785 HELQQ8TDG4 1101 aa5.35□□□□□ -1.55
SHQ1-208ENST00000482785 SH3TC2Q8TF17 1288 aa5.35□□□□□ -1.55
SHQ1-208ENST00000482785 ZNF622Q969S3 477 aaKnown RBP eCLIP5.35□□□□□ -1.55
SHQ1-208ENST00000482785 SPATA32Q96LK8 384 aa5.35□□□□□ -1.55
SHQ1-208ENST00000482785 CFHR5Q9BXR6 569 aa5.35□□□□□ -1.55
SHQ1-208ENST00000482785 RBCK1Q9BYM8 510 aa5.35□□□□□ -1.55
SHQ1-208ENST00000482785 BACH2Q9BYV9 841 aa5.35□□□□□ -1.55
SHQ1-208ENST00000482785 KCNH6Q9H252 994 aa5.35□□□□□ -1.55
SHQ1-208ENST00000482785 EFCC1Q9HA90 598 aa5.35□□□□□ -1.55
SHQ1-208ENST00000482785 SRP68Q9UHB9 627 aaKnown RBP5.35□□□□□ -1.55
SHQ1-208ENST00000482785 PGAP2Q9UHJ9 254 aa5.35□□□□□ -1.55
SHQ1-208ENST00000482785 RTCBQ9Y3I0 505 aaKnown RBP5.35□□□□□ -1.55
SHQ1-208ENST00000482785 DNAH14Q0VDD8 3507 aa5.35□□□□□ -1.55
SHQ1-208ENST00000482785 ZNF646O15015 1829 aaPredicted RBP5.34□□□□□ -1.55
SHQ1-208ENST00000482785 ITPR3Q14573 2671 aa5.34□□□□□ -1.55
SHQ1-208ENST00000482785 ANKRD30AQ9BXX3 1397 aa5.34□□□□□ -1.55
SHQ1-208ENST00000482785 ADGRF5Q8IZF2 1346 aa5.34□□□□□ -1.55
SHQ1-208ENST00000482785 TM4SF1P30408 202 aa5.34□□□□□ -1.55
SHQ1-208ENST00000482785 FKBP5Q13451 457 aaPredicted RBP5.34□□□□□ -1.55
SHQ1-208ENST00000482785 MTFR1Q15390 333 aa5.34□□□□□ -1.55
SHQ1-208ENST00000482785 MPRIPQ6WCQ1 1025 aa5.34□□□□□ -1.55
SHQ1-208ENST00000482785 SH3RF1Q7Z6J0 888 aa5.34□□□□□ -1.55
SHQ1-208ENST00000482785 NKX2-3Q8TAU0 364 aa5.34□□□□□ -1.55
SHQ1-208ENST00000482785 IL21Q9HBE4 155 aa5.34□□□□□ -1.55
SHQ1-208ENST00000482785 SH2B1Q9NRF2 756 aaPredicted RBP5.34□□□□□ -1.55
SHQ1-208ENST00000482785 MYH14Q7Z406 1995 aaKnown RBP5.34□□□□□ -1.55
SHQ1-208ENST00000482785 ANKRD31Q8N7Z5 1873 aa5.34□□□□□ -1.55
SHQ1-208ENST00000482785 COL11A2P13942 1736 aaPredicted RBP5.34□□□□□ -1.56
SHQ1-208ENST00000482785 MRC1P22897 1456 aa5.33□□□□□ -1.56
SHQ1-208ENST00000482785 USP31Q70CQ4 1352 aa5.33□□□□□ -1.56
SHQ1-208ENST00000482785 CARMIL3Q8ND23 1372 aa5.33□□□□□ -1.56
SHQ1-208ENST00000482785 LOC102724428A0A0B4J2F2 783 aa5.33□□□□□ -1.56
SHQ1-208ENST00000482785 SMARCA5O60264 1052 aaPredicted RBP5.33□□□□□ -1.56
SHQ1-208ENST00000482785 FARP2O94887 1054 aaPredicted RBP5.33□□□□□ -1.56
SHQ1-208ENST00000482785 HIRAP54198 1017 aaPredicted RBP5.33□□□□□ -1.56
SHQ1-208ENST00000482785 SIK1P57059 783 aa5.33□□□□□ -1.56
SHQ1-208ENST00000482785 MTMR3Q13615 1198 aa5.33□□□□□ -1.56
SHQ1-208ENST00000482785 NBPF20Q3BBV1 942 aa5.33□□□□□ -1.56
SHQ1-208ENST00000482785 SLC51AQ86UW1 340 aa5.33□□□□□ -1.56
SHQ1-208ENST00000482785 BPHLQ86WA6 291 aaPredicted RBP5.33□□□□□ -1.56
SHQ1-208ENST00000482785 C7orf61Q8IZ16 206 aa5.33□□□□□ -1.56
SHQ1-208ENST00000482785 CITED4Q96RK1 184 aa5.33□□□□□ -1.56
SHQ1-208ENST00000482785 MKNK1Q9BUB5 465 aa5.33□□□□□ -1.56
SHQ1-208ENST00000482785 SLC6A16Q9GZN6 736 aa5.33□□□□□ -1.56
SHQ1-208ENST00000482785 UNC93B1Q9H1C4 597 aa5.33□□□□□ -1.56
SHQ1-208ENST00000482785 TJP1Q07157 1748 aa5.33□□□□□ -1.56
SHQ1-208ENST00000482785 NRXN2Q9P2S2 1712 aa5.33□□□□□ -1.56
SHQ1-208ENST00000482785 ASPMQ8IZT6 3477 aa5.32□□□□□ -1.56
SHQ1-208ENST00000482785 MAGEB6P1A0A0J9YX57 407 aa5.32□□□□□ -1.56
SHQ1-208ENST00000482785 PI4K2BG5E9Z4 385 aa5.32□□□□□ -1.56
SHQ1-208ENST00000482785 WASLO00401 505 aaPredicted RBP5.32□□□□□ -1.56
SHQ1-208ENST00000482785 TREHO43280 583 aa5.32□□□□□ -1.56
SHQ1-208ENST00000482785 NDUFB5O43674 189 aa5.32□□□□□ -1.56
SHQ1-208ENST00000482785 S1PR4O95977 384 aa5.32□□□□□ -1.56
SHQ1-208ENST00000482785 P4HBP07237 508 aaKnown RBP5.32□□□□□ -1.56
SHQ1-208ENST00000482785 IGFBP4P22692 258 aa5.32□□□□□ -1.56
SHQ1-208ENST00000482785 HDLBPQ00341 1268 aaKnown RBP5.32□□□□□ -1.56
SHQ1-208ENST00000482785 TMC7Q7Z402 723 aa5.32□□□□□ -1.56
SHQ1-208ENST00000482785 TSEN2Q8NCE0 465 aaKnown RBP5.32□□□□□ -1.56
SHQ1-208ENST00000482785 SMARCC1Q92922 1105 aaPredicted RBP5.32□□□□□ -1.56
SHQ1-208ENST00000482785 SLC10A4Q96EP9 437 aa5.32□□□□□ -1.56
SHQ1-208ENST00000482785 ERO1AQ96HE7 468 aa5.32□□□□□ -1.56
SHQ1-208ENST00000482785 CARD14Q9BXL6 1004 aa5.32□□□□□ -1.56
SHQ1-208ENST00000482785 ADARB2Q9NS39 739 aaKnown RBP5.32□□□□□ -1.56
SHQ1-208ENST00000482785 TRIOO75962 3097 aa5.32□□□□□ -1.56
SHQ1-208ENST00000482785 ADGRB1O14514 1584 aa5.32□□□□□ -1.56
SHQ1-208ENST00000482785 EIF3AQ14152 1382 aaKnown RBP5.31□□□□□ -1.56
SHQ1-208ENST00000482785 FRYQ5TBA9 3013 aa5.31□□□□□ -1.56
SHQ1-208ENST00000482785 ESPNB1AK53 854 aa5.31□□□□□ -1.56
SHQ1-208ENST00000482785 GJA8P48165 433 aa5.31□□□□□ -1.56
SHQ1-208ENST00000482785 CAPN12Q6ZSI9 719 aa5.31□□□□□ -1.56
SHQ1-208ENST00000482785 NUDT16Q96DE0 195 aaKnown RBP5.31□□□□□ -1.56
SHQ1-208ENST00000482785 POGKQ9P215 609 aa5.31□□□□□ -1.56
SHQ1-208ENST00000482785 CDV3Q9UKY7 258 aaKnown RBP5.31□□□□□ -1.56
SHQ1-208ENST00000482785 PCDHB11Q9Y5F2 797 aa5.31□□□□□ -1.56
SHQ1-208ENST00000482785 MYO15AQ9UKN7 3530 aa5.31□□□□□ -1.56
SHQ1-208ENST00000482785 ANKRD50Q9ULJ7 1429 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms