RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 MARCKSP29966 332 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-220ENST00000482507 CLEC4GQ6UXB4 293 aa17.25■□□□□ 0.35
ATG4B-220ENST00000482507 ZNF592Q92610 1267 aa17.25■□□□□ 0.35
ATG4B-220ENST00000482507 NAT10Q9H0A0 1025 aaKnown RBP17.25■□□□□ 0.35
ATG4B-220ENST00000482507 INCENPQ9NQS7 918 aa17.25■□□□□ 0.35
ATG4B-220ENST00000482507 TRMT1Q9NXH9 659 aaKnown RBP17.25■□□□□ 0.35
ATG4B-220ENST00000482507 PRDM4Q9UKN5 801 aa17.25■□□□□ 0.35
ATG4B-220ENST00000482507 WDR19Q8NEZ3 1342 aa17.24■□□□□ 0.35
ATG4B-220ENST00000482507 SPDYE4A6NLX3 237 aa17.24■□□□□ 0.35
ATG4B-220ENST00000482507 CDC27P30260 824 aa17.24■□□□□ 0.35
ATG4B-220ENST00000482507 SF3B2Q13435 895 aaKnown RBP17.24■□□□□ 0.35
ATG4B-220ENST00000482507 NCAPHQ15003 741 aa17.24■□□□□ 0.35
ATG4B-220ENST00000482507 AKT1S1Q96B36 256 aa17.24■□□□□ 0.35
ATG4B-220ENST00000482507 UTP14AQ9BVJ6 771 aaKnown RBP17.24■□□□□ 0.35
ATG4B-220ENST00000482507 TAOK2Q9UL54 1235 aa17.24■□□□□ 0.35
ATG4B-220ENST00000482507 PAXBP1Q9Y5B6 917 aa17.24■□□□□ 0.35
ATG4B-220ENST00000482507 MYO5AQ9Y4I1 1855 aaKnown RBP17.24■□□□□ 0.35
ATG4B-220ENST00000482507 UBE2Q2LH0YL09 131 aa17.23■□□□□ 0.35
ATG4B-220ENST00000482507 SH2B2O14492 632 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-220ENST00000482507 PKNOX2Q96KN3 472 aa17.23■□□□□ 0.35
ATG4B-220ENST00000482507 XPO4Q9C0E2 1151 aaKnown RBP17.23■□□□□ 0.35
ATG4B-220ENST00000482507 ANGEL1Q9UNK9 670 aaKnown RBP17.23■□□□□ 0.35
ATG4B-220ENST00000482507 ZMYM6O95789 1325 aa17.23■□□□□ 0.35
ATG4B-220ENST00000482507 SLC3A2P08195 630 aaKnown RBP17.23■□□□□ 0.35
ATG4B-220ENST00000482507 ISM2Q6H9L7 571 aa17.23■□□□□ 0.35
ATG4B-220ENST00000482507 SYNE3Q6ZMZ3 975 aa17.23■□□□□ 0.35
ATG4B-220ENST00000482507 CCAR2Q8N163 923 aaKnown RBP17.23■□□□□ 0.35
ATG4B-220ENST00000482507 CCDC112Q8NEF3 446 aa17.23■□□□□ 0.35
ATG4B-220ENST00000482507 PHKBQ93100 1093 aa17.23■□□□□ 0.35
ATG4B-220ENST00000482507 BPIFA3Q9BQP9 254 aa17.23■□□□□ 0.35
ATG4B-220ENST00000482507 OSBPL5Q9H0X9 879 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-220ENST00000482507 WWC3Q9ULE0 1092 aa17.23■□□□□ 0.35
ATG4B-220ENST00000482507 ZNF831Q5JPB2 1677 aa17.23■□□□□ 0.35
ATG4B-220ENST00000482507 CICQ96RK0 1608 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-220ENST00000482507 RREB1Q92766 1687 aa17.23■□□□□ 0.35
ATG4B-220ENST00000482507 CMA1P23946 247 aa17.22■□□□□ 0.35
ATG4B-220ENST00000482507 PHKA1P46020 1223 aa17.22■□□□□ 0.35
ATG4B-220ENST00000482507 SLC39A14Q15043 492 aa17.22■□□□□ 0.35
ATG4B-220ENST00000482507 COL23A1Q86Y22 540 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-220ENST00000482507 SETDB2Q96T68 719 aa17.22■□□□□ 0.35
ATG4B-220ENST00000482507 ALG1Q9BT22 464 aa17.22■□□□□ 0.35
ATG4B-220ENST00000482507 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.22■□□□□ 0.352e-6■■□□□ 13.4
ATG4B-220ENST00000482507 IFNKQ9P0W0 207 aa17.22■□□□□ 0.35
ATG4B-220ENST00000482507 CDHR2Q9BYE9 1310 aa17.22■□□□□ 0.35
ATG4B-220ENST00000482507 ZNF532Q9HCE3 1301 aa17.22■□□□□ 0.35
ATG4B-220ENST00000482507 TAF1LQ8IZX4 1826 aa17.22■□□□□ 0.35
ATG4B-220ENST00000482507 B4E1Z4 1266 aa17.22■□□□□ 0.35
ATG4B-220ENST00000482507 IDH1O75874 414 aaKnown RBP17.22■□□□□ 0.35
ATG4B-220ENST00000482507 CTSWP56202 376 aa17.22■□□□□ 0.35
ATG4B-220ENST00000482507 NLRP12P59046 1061 aa17.22■□□□□ 0.35
ATG4B-220ENST00000482507 ARMCX5Q6P1M9 558 aa17.22■□□□□ 0.35
ATG4B-220ENST00000482507 VPS37DQ86XT2 251 aa17.22■□□□□ 0.35
ATG4B-220ENST00000482507 HSD3B7Q9H2F3 369 aa17.22■□□□□ 0.35
ATG4B-220ENST00000482507 TACC3Q9Y6A5 838 aa17.22■□□□□ 0.35
ATG4B-220ENST00000482507 NTSR2O95665 410 aa17.21■□□□□ 0.35
ATG4B-220ENST00000482507 GYS1P13807 737 aa17.21■□□□□ 0.35
ATG4B-220ENST00000482507 ZSCAN20P17040 1043 aaPredicted RBP17.21■□□□□ 0.35
ATG4B-220ENST00000482507 METAP2P50579 478 aaKnown RBP eCLIP17.21■□□□□ 0.35
ATG4B-220ENST00000482507 ERFEQ4G0M1 354 aa17.21■□□□□ 0.35
ATG4B-220ENST00000482507 KRT40Q6A162 431 aa17.21■□□□□ 0.35
ATG4B-220ENST00000482507 APOA5Q6Q788 366 aa17.21■□□□□ 0.35
ATG4B-220ENST00000482507 MYL10Q9BUA6 226 aa17.21■□□□□ 0.35
ATG4B-220ENST00000482507 CNNM1Q9NRU3 951 aa17.21■□□□□ 0.35
ATG4B-220ENST00000482507 NUP98P52948 1817 aa17.21■□□□□ 0.35
ATG4B-220ENST00000482507 TCRBV5S4A2TA0A5A2 114 aa17.21■□□□□ 0.35
ATG4B-220ENST00000482507 RANBP6O60518 1105 aaKnown RBP17.21■□□□□ 0.35
ATG4B-220ENST00000482507 APPP05067 770 aa17.21■□□□□ 0.35
ATG4B-220ENST00000482507 PDE6AP16499 860 aa17.21■□□□□ 0.35
ATG4B-220ENST00000482507 GTF2E1P29083 439 aaPredicted RBP17.21■□□□□ 0.35
ATG4B-220ENST00000482507 PTPAQ15257 358 aa17.21■□□□□ 0.35
ATG4B-220ENST00000482507 SYCP1Q15431 976 aa17.21■□□□□ 0.35
ATG4B-220ENST00000482507 PTPN14Q15678 1187 aa17.21■□□□□ 0.35
ATG4B-220ENST00000482507 SHC4Q6S5L8 630 aa17.21■□□□□ 0.35
ATG4B-220ENST00000482507 FAM217BQ9NTX9 383 aaPredicted RBP17.21■□□□□ 0.35
ATG4B-220ENST00000482507 SMC2O95347 1197 aa17.2■□□□□ 0.34
ATG4B-220ENST00000482507 NFIXQ14938 502 aa17.2■□□□□ 0.34
ATG4B-220ENST00000482507 NTRK3Q16288 839 aa17.2■□□□□ 0.34
ATG4B-220ENST00000482507 PARP10Q53GL7 1025 aa17.2■□□□□ 0.34
ATG4B-220ENST00000482507 CCDC102BQ68D86 513 aa17.2■□□□□ 0.34
ATG4B-220ENST00000482507 MICU3Q86XE3 530 aa17.2■□□□□ 0.34
ATG4B-220ENST00000482507 IGDCC4Q8TDY8 1250 aa17.2■□□□□ 0.34
ATG4B-220ENST00000482507 ZNF512BQ96KM6 892 aaPredicted RBP17.2■□□□□ 0.34
ATG4B-220ENST00000482507 MAP3K14Q99558 947 aa17.2■□□□□ 0.34
ATG4B-220ENST00000482507 SRCAPQ6ZRS2 3230 aa17.2■□□□□ 0.34
ATG4B-220ENST00000482507 ANKRD18BA2A2Z9 1011 aa17.2■□□□□ 0.34
ATG4B-220ENST00000482507 TRDNQ13061 729 aa17.2■□□□□ 0.34
ATG4B-220ENST00000482507 UBE3CQ15386 1083 aa17.2■□□□□ 0.34
ATG4B-220ENST00000482507 E4F1Q66K89 784 aaPredicted RBP17.2■□□□□ 0.34
ATG4B-220ENST00000482507 TMC6Q7Z403 805 aa17.2■□□□□ 0.34
ATG4B-220ENST00000482507 PDGFDQ9GZP0 370 aaPredicted RBP17.2■□□□□ 0.34
ATG4B-220ENST00000482507 HPSEQ9Y251 543 aa17.2■□□□□ 0.34
ATG4B-220ENST00000482507 PDE8BO95263 885 aa17.19■□□□□ 0.34
ATG4B-220ENST00000482507 ATP1A3P13637 1013 aa17.19■□□□□ 0.34
ATG4B-220ENST00000482507 ADRA2BP18089 450 aa17.19■□□□□ 0.34
ATG4B-220ENST00000482507 BAG6P46379 1132 aa17.19■□□□□ 0.34
ATG4B-220ENST00000482507 C3orf67Q6ZVT6 689 aa17.19■□□□□ 0.34
ATG4B-220ENST00000482507 NBPF5PQ86XG9 351 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-220ENST00000482507 HELBQ8NG08 1087 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-220ENST00000482507 CLIC6Q96NY7 704 aa17.19■□□□□ 0.34
ATG4B-220ENST00000482507 KCND1Q9NSA2 647 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms