RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 ERO1BQ86YB8 467 aa14.51□□□□□ -0.09
HMGN1-213ENST00000482192 IFNL1Q8IU54 200 aa14.51□□□□□ -0.09
HMGN1-213ENST00000482192 ZKSCAN4Q969J2 545 aaPredicted RBP14.51□□□□□ -0.09
HMGN1-213ENST00000482192 OTUD5Q96G74 571 aa14.51□□□□□ -0.09
HMGN1-213ENST00000482192 CFHR5Q9BXR6 569 aa14.51□□□□□ -0.09
HMGN1-213ENST00000482192 PIH1D3Q9NQM4 214 aaKnown RBP14.51□□□□□ -0.09
HMGN1-213ENST00000482192 ATRNL1Q5VV63 1379 aa14.5□□□□□ -0.09
HMGN1-213ENST00000482192 TBC1D8O95759 1140 aa14.5□□□□□ -0.09
HMGN1-213ENST00000482192 PLCG2P16885 1265 aa14.5□□□□□ -0.09
HMGN1-213ENST00000482192 GTF2A2P52657 109 aa14.5□□□□□ -0.09
HMGN1-213ENST00000482192 NOM1Q5C9Z4 860 aaKnown RBP14.5□□□□□ -0.09
HMGN1-213ENST00000482192 OTUD7BQ6GQQ9 843 aa14.5□□□□□ -0.09
HMGN1-213ENST00000482192 CNKSR2Q8WXI2 1034 aa14.5□□□□□ -0.09
HMGN1-213ENST00000482192 DDX4Q9NQI0 724 aaKnown RBP14.5□□□□□ -0.09
HMGN1-213ENST00000482192 ZNF112Q9UJU3 913 aa14.5□□□□□ -0.09
HMGN1-213ENST00000482192 TESPA1A2RU30 521 aaPredicted RBP14.49□□□□□ -0.09
HMGN1-213ENST00000482192 IGF2BP3O00425 579 aaKnown RBP eCLIP14.49□□□□□ -0.09
HMGN1-213ENST00000482192 IDH1O75874 414 aaKnown RBP14.49□□□□□ -0.09
HMGN1-213ENST00000482192 INPP5BP32019 993 aa14.49□□□□□ -0.09
HMGN1-213ENST00000482192 TMED8Q6PL24 325 aaPredicted RBP14.49□□□□□ -0.09
HMGN1-213ENST00000482192 SH3BP5LQ7L8J4 393 aa14.49□□□□□ -0.09
HMGN1-213ENST00000482192 TEX11Q8IYF3 940 aa14.49□□□□□ -0.09
HMGN1-213ENST00000482192 SH3RF3Q8TEJ3 882 aaPredicted RBP14.49□□□□□ -0.09
HMGN1-213ENST00000482192 MS4A4AQ96JQ5 239 aa14.49□□□□□ -0.09
HMGN1-213ENST00000482192 LRRCC1Q9C099 1032 aa14.49□□□□□ -0.09
HMGN1-213ENST00000482192 AATFQ9NY61 560 aaKnown RBP eCLIP14.49□□□□□ -0.09
HMGN1-213ENST00000482192 COL2A1P02458 1487 aaPredicted RBP14.49□□□□□ -0.09
HMGN1-213ENST00000482192 DOCK2Q92608 1830 aa14.48□□□□□ -0.09
HMGN1-213ENST00000482192 DDTLA6NHG4 134 aaPredicted RBP14.48□□□□□ -0.09
HMGN1-213ENST00000482192 CAPN15O75808 1086 aa14.48□□□□□ -0.09
HMGN1-213ENST00000482192 PPP4CP60510 307 aa14.48□□□□□ -0.09
HMGN1-213ENST00000482192 PPATQ06203 517 aa14.48□□□□□ -0.09
HMGN1-213ENST00000482192 MAP3K12Q12852 859 aa14.48□□□□□ -0.09
HMGN1-213ENST00000482192 PPIL2Q13356 520 aa14.48□□□□□ -0.09
HMGN1-213ENST00000482192 TTF1Q15361 905 aaPredicted RBP14.48□□□□□ -0.09
HMGN1-213ENST00000482192 NOL9Q5SY16 702 aaKnown RBP14.48□□□□□ -0.09
HMGN1-213ENST00000482192 ADGRA1Q86SQ6 560 aa14.48□□□□□ -0.09
HMGN1-213ENST00000482192 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.48□□□□□ -0.09
HMGN1-213ENST00000482192 BCL11AQ9H165 835 aa14.48□□□□□ -0.09
HMGN1-213ENST00000482192 NDUFB9Q9Y6M9 179 aa14.48□□□□□ -0.09
HMGN1-213ENST00000482192 CCL15-CCL14A0A0B4J2E2 113 aa14.47□□□□□ -0.09
HMGN1-213ENST00000482192 GPR25O00155 361 aa14.47□□□□□ -0.09
HMGN1-213ENST00000482192 CETPP11597 493 aa14.47□□□□□ -0.09
HMGN1-213ENST00000482192 CYP7A1P22680 504 aa14.47□□□□□ -0.09
HMGN1-213ENST00000482192 MAP3K10Q02779 954 aa14.47□□□□□ -0.09
HMGN1-213ENST00000482192 SNAPC2Q13487 334 aa14.47□□□□□ -0.09
HMGN1-213ENST00000482192 DGKZQ13574 1117 aa14.47□□□□□ -0.09
HMGN1-213ENST00000482192 CCL15Q16663 113 aa14.47□□□□□ -0.09
HMGN1-213ENST00000482192 CERS3Q8IU89 383 aa14.47□□□□□ -0.09
HMGN1-213ENST00000482192 ZNF296Q8WUU4 475 aaPredicted RBP14.47□□□□□ -0.09
HMGN1-213ENST00000482192 ABHD8Q96I13 439 aa14.47□□□□□ -0.09
HMGN1-213ENST00000482192 PTPN18Q99952 460 aa14.47□□□□□ -0.09
HMGN1-213ENST00000482192 OSBPL5Q9H0X9 879 aaPredicted RBP14.47□□□□□ -0.09
HMGN1-213ENST00000482192 ANTXR1Q9H6X2 564 aa14.47□□□□□ -0.09
HMGN1-213ENST00000482192 PHF20L1A8MW92 1017 aa14.46□□□□□ -0.09
HMGN1-213ENST00000482192 IRF6O14896 467 aa14.46□□□□□ -0.09
HMGN1-213ENST00000482192 TBC1D12O60347 775 aa14.46□□□□□ -0.09
HMGN1-213ENST00000482192 SCYL3Q8IZE3 742 aa14.46□□□□□ -0.09
HMGN1-213ENST00000482192 MAGEB6Q8N7X4 407 aa14.46□□□□□ -0.09
HMGN1-213ENST00000482192 BRI3BPQ8WY22 251 aa14.46□□□□□ -0.09
HMGN1-213ENST00000482192 MCOLN1Q9GZU1 580 aa14.46□□□□□ -0.09
HMGN1-213ENST00000482192 PICK1Q9NRD5 415 aa14.46□□□□□ -0.09
HMGN1-213ENST00000482192 CRHR2Q13324 411 aa14.45□□□□□ -0.1
HMGN1-213ENST00000482192 CTU1Q7Z7A3 348 aaKnown RBP14.45□□□□□ -0.1
HMGN1-213ENST00000482192 DNAJC2Q99543 621 aaKnown RBP14.45□□□□□ -0.1
HMGN1-213ENST00000482192 DHX36Q9H2U1 1008 aaKnown RBP14.45□□□□□ -0.1
HMGN1-213ENST00000482192 R3HDMLQ9H3Y0 253 aa14.45□□□□□ -0.1
HMGN1-213ENST00000482192 DCTPP1Q9H773 170 aa14.45□□□□□ -0.1
HMGN1-213ENST00000482192 FLT1P17948 1338 aa14.44□□□□□ -0.1
HMGN1-213ENST00000482192 GOLIM4O00461 696 aa14.44□□□□□ -0.1
HMGN1-213ENST00000482192 CTNND1O60716 968 aaKnown RBP14.44□□□□□ -0.1
HMGN1-213ENST00000482192 FKTNO75072 461 aa14.44□□□□□ -0.1
HMGN1-213ENST00000482192 ATP5JP18859 108 aa14.44□□□□□ -0.1
HMGN1-213ENST00000482192 MIGA1Q8NAN2 632 aa14.44□□□□□ -0.1
HMGN1-213ENST00000482192 TGFBRAP1Q8WUH2 860 aa14.44□□□□□ -0.1
HMGN1-213ENST00000482192 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.44□□□□□ -0.1
HMGN1-213ENST00000482192 ZCCHC17Q9NP64 241 aaKnown RBP14.44□□□□□ -0.1
HMGN1-213ENST00000482192 KCNH4Q9UQ05 1017 aa14.44□□□□□ -0.1
HMGN1-213ENST00000482192 CASP8AP2Q9UKL3 1982 aa14.43□□□□□ -0.1
HMGN1-213ENST00000482192 SMARCA5O60264 1052 aaPredicted RBP14.43□□□□□ -0.1
HMGN1-213ENST00000482192 DYNLL1P63167 89 aaKnown RBP14.43□□□□□ -0.1
HMGN1-213ENST00000482192 SLC9C2Q5TAH2 1124 aa14.43□□□□□ -0.1
HMGN1-213ENST00000482192 MAPKAPK5Q8IW41 473 aa14.43□□□□□ -0.1
HMGN1-213ENST00000482192 FAM43AQ8N2R8 423 aa14.43□□□□□ -0.1
HMGN1-213ENST00000482192 PAG1Q9NWQ8 432 aa14.43□□□□□ -0.1
HMGN1-213ENST00000482192 PI4KBQ9UBF8 816 aa14.43□□□□□ -0.1
HMGN1-213ENST00000482192 HERC5Q9UII4 1024 aaKnown RBP14.43□□□□□ -0.1
HMGN1-213ENST00000482192 PCDHB15Q9Y5E8 787 aa14.43□□□□□ -0.1
HMGN1-213ENST00000482192 AK9Q5TCS8 1911 aa14.43□□□□□ -0.1
HMGN1-213ENST00000482192 SLURP2P0DP57 97 aa14.42□□□□□ -0.1
HMGN1-213ENST00000482192 PDE6AP16499 860 aa14.42□□□□□ -0.1
HMGN1-213ENST00000482192 PTPRAP18433 802 aa14.42□□□□□ -0.1
HMGN1-213ENST00000482192 TAF1CQ15572 869 aaPredicted RBP14.42□□□□□ -0.1
HMGN1-213ENST00000482192 PKN2Q16513 984 aaKnown RBP14.42□□□□□ -0.1
HMGN1-213ENST00000482192 CRBNQ96SW2 442 aa14.42□□□□□ -0.1
HMGN1-213ENST00000482192 HAUS7Q99871 368 aa14.42□□□□□ -0.1
HMGN1-213ENST00000482192 BOLA2Q9H3K6 86 aa14.42□□□□□ -0.1
HMGN1-213ENST00000482192 ZFYVE28Q9HCC9 887 aa14.42□□□□□ -0.1
HMGN1-213ENST00000482192 FAM196BA6NMK8 535 aa14.41□□□□□ -0.1
HMGN1-213ENST00000482192 BTBD19C9JJ37 291 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms