RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 NPTXRO95502 500 aa11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 CLPPQ16740 277 aaPredicted RBP11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 CACTIN-AS1Q8N1I8 211 aa11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 TEX9Q8N6V9 391 aa11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 ATP11CQ8NB49 1132 aa11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 ERMNQ8TAM6 284 aa11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 SMARCC2Q8TAQ2 1214 aa11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 CNKSR1Q969H4 720 aa11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 KIFC2Q96AC6 838 aa11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 PNKPQ96T60 521 aa11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 MTRQ99707 1265 aa11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 GPCPD1Q9NPB8 672 aa11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 TBC1D7Q9P0N9 293 aa11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 SWAP70Q9UH65 585 aa11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 FAM135BQ49AJ0 1406 aa11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 EVC2Q86UK5 1308 aa11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 ZC3H4Q9UPT8 1303 aaKnown RBP11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 FANCAO15360 1455 aa11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 SMIM24O75264 130 aa11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 STIP1P31948 543 aaKnown RBP11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 XRCC4Q13426 336 aa11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 CUL4BQ13620 913 aa11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 SYTL4Q96C24 671 aaPredicted RBP11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 SENP2Q9HC62 589 aa11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 WDR35Q9P2L0 1181 aa11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 GPR75-ASB3A0A0A6YYF3 556 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 VWA3AA6NCI4 1184 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 MCM3P25205 808 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 FLT3P36888 993 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 GNAQP50148 359 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 TMF1P82094 1093 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 RIPK1Q13546 671 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 SKIDA1Q1XH10 827 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 PRAG1Q86YV5 1406 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 CKAP2LQ8IYA6 745 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 TMEM57Q8N5G2 664 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 PPP1R14BQ96C90 147 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 CORO1BQ9BR76 489 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 NUP58Q9BVL2 599 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 TMCO1Q9UM00 188 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 ASB3Q9Y575 518 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 SETD1BQ9UPS6 1966 aaKnown RBP11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 ARHGEF5Q12774 1597 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 BUB1BO60566 1050 aaPredicted RBP11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 WDHD1O75717 1129 aaPredicted RBP11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 CAPN15O75808 1086 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 MBD4O95243 580 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 CCDC175P0C221 793 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 IBSPP21815 317 aaPredicted RBP11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 HOXA10P31260 410 aaPredicted RBP11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 PSMC4P43686 418 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 GNGT1P63211 74 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 STX1AQ16623 288 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 ACCSLQ4AC99 568 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 SYCP3Q8IZU3 236 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 TBC1D31Q96DN5 1066 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 JAKMIP1Q96N16 626 aaKnown RBP11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 BPIFA3Q9BQP9 254 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 MOV10L1Q9BXT6 1211 aaKnown RBP11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 TUBGCP4Q9UGJ1 667 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 HPCAL4Q9UM19 191 aa11.68□□□□□ -0.54
PRPF4B-206ENST00000481109 SYCP2Q9BX26 1530 aa11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 RASSF10A6NK89 507 aa11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 IDO1P14902 403 aa11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 ZFXP17010 805 aaPredicted RBP11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 BTG3Q14201 252 aaPredicted RBP11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 TMEM110Q86TL2 294 aa11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 SUGCTQ9HAC7 445 aa11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 DACT1Q9NYF0 836 aa11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 ATXN10Q9UBB4 475 aa11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 SSH2Q76I76 1423 aa11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 NUTM2FA1L443 756 aa11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 VIMP08670 466 aaKnown RBP11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 PARP1P09874 1014 aaKnown RBP11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 XBP1P17861 261 aa11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 CTCFP49711 727 aaPredicted RBP11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 PSMD7P51665 324 aa11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 PHEXP78562 749 aa11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 DNM1Q05193 864 aaKnown RBP11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 ADCY1Q08828 1119 aa11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 TMEM62Q0P6H9 643 aa11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 ENOX2Q16206 610 aaKnown RBP11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 CAMK4Q16566 473 aa11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 GNPTABQ3T906 1256 aa11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 C6orf89Q6UWU4 347 aa11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 CDC37L1Q7L3B6 337 aa11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 P3H4Q92791 437 aa11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 SAMM50Q9Y512 469 aa11.67□□□□□ -0.54
PRPF4B-206ENST00000481109 TTC21AQ8NDW8 1320 aa11.66□□□□□ -0.54
PRPF4B-206ENST00000481109 ALDH3A1P30838 453 aa11.66□□□□□ -0.54
PRPF4B-206ENST00000481109 VSNL1P62760 191 aa11.66□□□□□ -0.54
PRPF4B-206ENST00000481109 PPP1R15BQ5SWA1 713 aa11.66□□□□□ -0.54
PRPF4B-206ENST00000481109 PCDH18Q9HCL0 1135 aa11.66□□□□□ -0.54
PRPF4B-206ENST00000481109 ABCC11Q96J66 1382 aa11.66□□□□□ -0.54
PRPF4B-206ENST00000481109 A2MP01023 1474 aa11.66□□□□□ -0.54
PRPF4B-206ENST00000481109 ZNF202O95125 648 aa11.65□□□□□ -0.54
PRPF4B-206ENST00000481109 KRT85P78386 507 aa11.65□□□□□ -0.54
PRPF4B-206ENST00000481109 MYO1EQ12965 1108 aa11.65□□□□□ -0.54
PRPF4B-206ENST00000481109 SEPT14Q6ZU15 432 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms