RNA–Protein interactions for RNA: ENST00000480894.1

RGPD6-209, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2

Gene RGPD6, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-209ENST00000480894 SMYD4Q8IYR2 804 aaPredicted RBP8.3□□□□□ -1.08
RGPD6-209ENST00000480894 WDR89Q96FK6 387 aaPredicted RBP8.3□□□□□ -1.08
RGPD6-209ENST00000480894 CCDC87Q9NVE4 849 aa8.3□□□□□ -1.08
RGPD6-209ENST00000480894 MFAP1P55081 439 aaKnown RBP8.29□□□□□ -1.08
RGPD6-209ENST00000480894 KCNMB1Q16558 191 aa8.29□□□□□ -1.08
RGPD6-209ENST00000480894 KIAA0319Q5VV43 1072 aa8.29□□□□□ -1.08
RGPD6-209ENST00000480894 ARHGAP27Q6ZUM4 889 aa8.29□□□□□ -1.08
RGPD6-209ENST00000480894 GNEQ9Y223 722 aaKnown RBP8.29□□□□□ -1.08
RGPD6-209ENST00000480894 TSPAN15O95858 294 aa8.28□□□□□ -1.08
RGPD6-209ENST00000480894 RANGAP1P46060 587 aaPredicted RBP8.28□□□□□ -1.08
RGPD6-209ENST00000480894 ID3Q02535 119 aa8.28□□□□□ -1.08
RGPD6-209ENST00000480894 LCNL1Q6ZST4 164 aa8.28□□□□□ -1.08
RGPD6-209ENST00000480894 NPM2Q86SE8 214 aaKnown RBP8.28□□□□□ -1.08
RGPD6-209ENST00000480894 DUSP23Q9BVJ7 150 aa8.28□□□□□ -1.08
RGPD6-209ENST00000480894 CCDC86Q9H6F5 360 aaKnown RBP8.28□□□□□ -1.08
RGPD6-209ENST00000480894 PRDM7Q9NQW5 492 aa8.28□□□□□ -1.08
RGPD6-209ENST00000480894 LILRA6Q6PI73 481 aa8.27□□□□□ -1.09
RGPD6-209ENST00000480894 ZSCAN18Q8TBC5 510 aaPredicted RBP8.27□□□□□ -1.09
RGPD6-209ENST00000480894 PPP1R16BQ96T49 567 aa8.27□□□□□ -1.09
RGPD6-209ENST00000480894 TNKS2Q9H2K2 1166 aa8.27□□□□□ -1.09
RGPD6-209ENST00000480894 DISC1Q9NRI5 854 aa8.27□□□□□ -1.09
RGPD6-209ENST00000480894 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.26□□□□□ -1.09
RGPD6-209ENST00000480894 ZNF862O60290 1169 aa8.26□□□□□ -1.09
RGPD6-209ENST00000480894 SLFN14P0C7P3 912 aa8.26□□□□□ -1.09
RGPD6-209ENST00000480894 TTLL4Q14679 1199 aa8.26□□□□□ -1.09
RGPD6-209ENST00000480894 LRRC56Q8IYG6 542 aaPredicted RBP8.26□□□□□ -1.09
RGPD6-209ENST00000480894 PCDHGC5Q9Y5F6 944 aa8.26□□□□□ -1.09
RGPD6-209ENST00000480894 NCANO14594 1321 aa8.26□□□□□ -1.09
RGPD6-209ENST00000480894 ITIH2P19823 946 aa8.25□□□□□ -1.09
RGPD6-209ENST00000480894 SSFA2P28290 1259 aa8.25□□□□□ -1.09
RGPD6-209ENST00000480894 PTPN12Q05209 780 aaKnown RBP8.25□□□□□ -1.09
RGPD6-209ENST00000480894 KIF4BQ2VIQ3 1234 aa8.25□□□□□ -1.09
RGPD6-209ENST00000480894 USPL1Q5W0Q7 1092 aa8.25□□□□□ -1.09
RGPD6-209ENST00000480894 SND1Q7KZF4 910 aaKnown RBP eCLIP8.25□□□□□ -1.09
RGPD6-209ENST00000480894 ZC3H12CQ9C0D7 883 aaKnown RBP8.25□□□□□ -1.09
RGPD6-209ENST00000480894 SNX11Q9Y5W9 270 aa8.25□□□□□ -1.09
RGPD6-209ENST00000480894 RNGTTO60942 597 aaKnown RBP8.24□□□□□ -1.09
RGPD6-209ENST00000480894 SF3B2Q13435 895 aaKnown RBP8.24□□□□□ -1.09
RGPD6-209ENST00000480894 PHLDB3Q6NSJ2 640 aa8.24□□□□□ -1.09
RGPD6-209ENST00000480894 SIAH1Q8IUQ4 282 aa8.24□□□□□ -1.09
RGPD6-209ENST00000480894 RGS22Q8NE09 1264 aa8.24□□□□□ -1.09
RGPD6-209ENST00000480894 LIN37Q96GY3 246 aaPredicted RBP8.24□□□□□ -1.09
RGPD6-209ENST00000480894 EHD4Q9H223 541 aa8.24□□□□□ -1.09
RGPD6-209ENST00000480894 PCOLCE2Q9UKZ9 415 aa8.24□□□□□ -1.09
RGPD6-209ENST00000480894 CTNND2Q9UQB3 1225 aa8.24□□□□□ -1.09
RGPD6-209ENST00000480894 PRRG2O14669 202 aa8.23□□□□□ -1.09
RGPD6-209ENST00000480894 HCLS1P14317 486 aaPredicted RBP8.23□□□□□ -1.09
RGPD6-209ENST00000480894 TXNDC2Q86VQ3 553 aa8.23□□□□□ -1.09
RGPD6-209ENST00000480894 TOP6BLQ8N6T0 577 aa8.23□□□□□ -1.09
RGPD6-209ENST00000480894 FKBP4Q02790 459 aaKnown RBP eCLIP8.22□□□□□ -1.09
RGPD6-209ENST00000480894 ZP2Q05996 745 aa8.22□□□□□ -1.09
RGPD6-209ENST00000480894 ASB11Q8WXH4 323 aa8.22□□□□□ -1.09
RGPD6-209ENST00000480894 ABCB6Q9NP58 842 aa8.22□□□□□ -1.09
RGPD6-209ENST00000480894 KRT82Q9NSB4 513 aa8.22□□□□□ -1.09
RGPD6-209ENST00000480894 NEFMP07197 916 aa8.21□□□□□ -1.1
RGPD6-209ENST00000480894 ZSCAN22P10073 491 aaPredicted RBP8.21□□□□□ -1.1
RGPD6-209ENST00000480894 IKZF1Q13422 519 aa8.21□□□□□ -1.1
RGPD6-209ENST00000480894 CCDC27Q2M243 656 aa8.21□□□□□ -1.1
RGPD6-209ENST00000480894 RPS26P11Q5JNZ5 115 aaPredicted RBP8.21□□□□□ -1.1
RGPD6-209ENST00000480894 SYDE1Q6ZW31 735 aaPredicted RBP8.21□□□□□ -1.1
RGPD6-209ENST00000480894 ANKLE2Q86XL3 938 aa8.21□□□□□ -1.1
RGPD6-209ENST00000480894 HEXIM2Q96MH2 286 aaKnown RBP8.21□□□□□ -1.1
RGPD6-209ENST00000480894 MTMR7Q9Y216 660 aa8.21□□□□□ -1.1
RGPD6-209ENST00000480894 B8ZZF3 427 aa8.2□□□□□ -1.1
RGPD6-209ENST00000480894 FAAP100Q0VG06 881 aa8.2□□□□□ -1.1
RGPD6-209ENST00000480894 FYB2Q5VWT5 728 aa8.2□□□□□ -1.1
RGPD6-209ENST00000480894 FAM214BQ7L5A3 538 aa8.2□□□□□ -1.1
RGPD6-209ENST00000480894 NPHS2Q9NP85 383 aa8.2□□□□□ -1.1
RGPD6-209ENST00000480894 LMCD1Q9NZU5 365 aa8.2□□□□□ -1.1
RGPD6-209ENST00000480894 GSTP1P09211 210 aaKnown RBP8.19□□□□□ -1.1
RGPD6-209ENST00000480894 AFMP43652 599 aa8.19□□□□□ -1.1
RGPD6-209ENST00000480894 ZNF157P51786 506 aaPredicted RBP8.19□□□□□ -1.1
RGPD6-209ENST00000480894 HNRNPUQ00839 825 aaKnown RBP eCLIP8.19□□□□□ -1.1
RGPD6-209ENST00000480894 PRPF40BQ6NWY9 871 aaKnown RBP8.19□□□□□ -1.1
RGPD6-209ENST00000480894 PRR23BQ6ZRT6 265 aa8.19□□□□□ -1.1
RGPD6-209ENST00000480894 TTLL10Q6ZVT0 673 aa8.19□□□□□ -1.1
RGPD6-209ENST00000480894 SPACA3Q8IXA5 215 aa8.19□□□□□ -1.1
RGPD6-209ENST00000480894 ISL2Q96A47 359 aa8.19□□□□□ -1.1
RGPD6-209ENST00000480894 KRTAP9-3Q9BYQ3 159 aa8.19□□□□□ -1.1
RGPD6-209ENST00000480894 KRT1P04264 644 aa8.18□□□□□ -1.1
RGPD6-209ENST00000480894 GLI1P08151 1106 aa8.18□□□□□ -1.1
RGPD6-209ENST00000480894 RAPGEFL1Q9UHV5 662 aa8.18□□□□□ -1.1
RGPD6-209ENST00000480894 NEFLP07196 543 aa8.17□□□□□ -1.1
RGPD6-209ENST00000480894 C1QTNF9P0C862 333 aa8.17□□□□□ -1.1
RGPD6-209ENST00000480894 ECM1Q16610 540 aa8.17□□□□□ -1.1
RGPD6-209ENST00000480894 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.17□□□□□ -1.1
RGPD6-209ENST00000480894 SSU72Q9NP77 194 aaKnown RBP8.17□□□□□ -1.1
RGPD6-209ENST00000480894 ANO2Q9NQ90 1003 aa8.17□□□□□ -1.1
RGPD6-209ENST00000480894 TMEM238LA0A1B0GVL6 79 aa8.16□□□□□ -1.1
RGPD6-209ENST00000480894 IGF2BP3O00425 579 aaKnown RBP eCLIP8.16□□□□□ -1.1
RGPD6-209ENST00000480894 ABL1P00519 1130 aa8.16□□□□□ -1.1
RGPD6-209ENST00000480894 ZNF211Q13398 564 aaPredicted RBP8.16□□□□□ -1.1
RGPD6-209ENST00000480894 PDZD3Q86UT5 571 aa8.16□□□□□ -1.1
RGPD6-209ENST00000480894 GTF2IRD1Q9UHL9 959 aa8.16□□□□□ -1.1
RGPD6-209ENST00000480894 CPNE3O75131 537 aaKnown RBP8.15□□□□□ -1.1
RGPD6-209ENST00000480894 BUD31P41223 144 aaPredicted RBP8.15□□□□□ -1.1
RGPD6-209ENST00000480894 ORC1Q13415 861 aa8.15□□□□□ -1.1
RGPD6-209ENST00000480894 NKPD1Q17RQ9 610 aa8.15□□□□□ -1.1
RGPD6-209ENST00000480894 MPZL3Q6UWV2 235 aa8.15□□□□□ -1.1
RGPD6-209ENST00000480894 KIRREL1Q96J84 757 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms