RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 TAF1CQ15572 869 aaPredicted RBP14.01□□□□□ -0.17
CCM2-213ENST00000480658 CEP85Q6P2H3 762 aa14.01□□□□□ -0.17
CCM2-213ENST00000480658 CDAN1Q8IWY9 1227 aa14.01□□□□□ -0.17
CCM2-213ENST00000480658 NSUN4Q96CB9 384 aaKnown RBP14.01□□□□□ -0.17
CCM2-213ENST00000480658 DHX36Q9H2U1 1008 aaKnown RBP14.01□□□□□ -0.17
CCM2-213ENST00000480658 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.01□□□□□ -0.17
CCM2-213ENST00000480658 FAM198AQ9UFP1 575 aa14.01□□□□□ -0.17
CCM2-213ENST00000480658 MYH2Q9UKX2 1941 aa14.01□□□□□ -0.17
CCM2-213ENST00000480658 CXCL11O14625 94 aa14□□□□□ -0.17
CCM2-213ENST00000480658 TBC1D12O60347 775 aa14□□□□□ -0.17
CCM2-213ENST00000480658 GJA5P36382 358 aa14□□□□□ -0.17
CCM2-213ENST00000480658 MCAMP43121 646 aa14□□□□□ -0.17
CCM2-213ENST00000480658 NFIAQ12857 509 aa14□□□□□ -0.17
CCM2-213ENST00000480658 FASTKD5Q7L8L6 764 aaKnown RBP14□□□□□ -0.17
CCM2-213ENST00000480658 SCYL3Q8IZE3 742 aa14□□□□□ -0.17
CCM2-213ENST00000480658 ZKSCAN4Q969J2 545 aaPredicted RBP14□□□□□ -0.17
CCM2-213ENST00000480658 HERC5Q9UII4 1024 aaKnown RBP14□□□□□ -0.17
CCM2-213ENST00000480658 RCAN3Q9UKA8 241 aa14□□□□□ -0.17
CCM2-213ENST00000480658 HPS5Q9UPZ3 1129 aa14□□□□□ -0.17
CCM2-213ENST00000480658 TNNQ9UQP3 1299 aa14□□□□□ -0.17
CCM2-213ENST00000480658 IRF6O14896 467 aa13.99□□□□□ -0.17
CCM2-213ENST00000480658 CTNND1O60716 968 aaKnown RBP13.99□□□□□ -0.17
CCM2-213ENST00000480658 RLBP1P12271 317 aa13.99□□□□□ -0.17
CCM2-213ENST00000480658 MAP3K10Q02779 954 aa13.99□□□□□ -0.17
CCM2-213ENST00000480658 TTF1Q15361 905 aaPredicted RBP13.99□□□□□ -0.17
CCM2-213ENST00000480658 NAA16Q6N069 864 aaPredicted RBP13.99□□□□□ -0.17
CCM2-213ENST00000480658 MIGA2Q7L4E1 593 aa13.99□□□□□ -0.17
CCM2-213ENST00000480658 ANKRD23Q86SG2 305 aa13.99□□□□□ -0.17
CCM2-213ENST00000480658 BRI3BPQ8WY22 251 aa13.99□□□□□ -0.17
CCM2-213ENST00000480658 KCNH4Q9UQ05 1017 aa13.99□□□□□ -0.17
CCM2-213ENST00000480658 TLR2O60603 784 aa13.98□□□□□ -0.17
CCM2-213ENST00000480658 PRMT2P55345 433 aa13.98□□□□□ -0.17
CCM2-213ENST00000480658 PICALMQ13492 652 aa13.98□□□□□ -0.17
CCM2-213ENST00000480658 PDE3AQ14432 1141 aa13.98□□□□□ -0.17
CCM2-213ENST00000480658 CLASRPQ8N2M8 674 aaKnown RBP13.98□□□□□ -0.17
CCM2-213ENST00000480658 KIF1BPQ96EK5 621 aa13.98□□□□□ -0.17
CCM2-213ENST00000480658 PARK7Q99497 189 aaKnown RBP13.98□□□□□ -0.17
CCM2-213ENST00000480658 PTPN18Q99952 460 aa13.98□□□□□ -0.17
CCM2-213ENST00000480658 OSBPL5Q9H0X9 879 aaPredicted RBP13.98□□□□□ -0.17
CCM2-213ENST00000480658 C1orf115Q9H7X2 142 aa13.98□□□□□ -0.17
CCM2-213ENST00000480658 EFCC1Q9HA90 598 aa13.98□□□□□ -0.17
CCM2-213ENST00000480658 GINM1Q9NU53 330 aa13.98□□□□□ -0.17
CCM2-213ENST00000480658 SLC45A1Q9Y2W3 748 aa13.98□□□□□ -0.17
CCM2-213ENST00000480658 TRIM17Q9Y577 477 aa13.98□□□□□ -0.17
CCM2-213ENST00000480658 RAB11FIP3O75154 756 aa13.97□□□□□ -0.17
CCM2-213ENST00000480658 RHBDL3P58872 404 aa13.97□□□□□ -0.17
CCM2-213ENST00000480658 MAP3K12Q12852 859 aa13.97□□□□□ -0.17
CCM2-213ENST00000480658 NBPF11Q86T75 865 aa13.97□□□□□ -0.17
CCM2-213ENST00000480658 TEX11Q8IYF3 940 aa13.97□□□□□ -0.17
CCM2-213ENST00000480658 PANK1Q8TE04 598 aa13.97□□□□□ -0.17
CCM2-213ENST00000480658 DBNDD2Q9BQY9 259 aa13.97□□□□□ -0.17
CCM2-213ENST00000480658 TRIM34Q9BYJ4 488 aa13.97□□□□□ -0.17
CCM2-213ENST00000480658 PI4KBQ9UBF8 816 aa13.97□□□□□ -0.17
CCM2-213ENST00000480658 INPP5BP32019 993 aa13.96□□□□□ -0.17
CCM2-213ENST00000480658 PPP4CP60510 307 aa13.96□□□□□ -0.17
CCM2-213ENST00000480658 PABPC4Q13310 644 aaKnown RBP eCLIP13.96□□□□□ -0.17
CCM2-213ENST00000480658 OTOP1Q7RTM1 612 aa13.96□□□□□ -0.17
CCM2-213ENST00000480658 AS3MTQ9HBK9 375 aa13.96□□□□□ -0.17
CCM2-213ENST00000480658 DBNLQ9UJU6 430 aaKnown RBP13.96□□□□□ -0.17
CCM2-213ENST00000480658 TAOK2Q9UL54 1235 aa13.96□□□□□ -0.17
CCM2-213ENST00000480658 PHF20L1A8MW92 1017 aa13.95□□□□□ -0.18
CCM2-213ENST00000480658 BTBD19C9JJ37 291 aa13.95□□□□□ -0.18
CCM2-213ENST00000480658 HLA-DOAP06340 250 aa13.95□□□□□ -0.18
CCM2-213ENST00000480658 HOXD10P28358 340 aa13.95□□□□□ -0.18
CCM2-213ENST00000480658 PI16Q6UXB8 463 aa13.95□□□□□ -0.18
CCM2-213ENST00000480658 AACSQ86V21 672 aa13.95□□□□□ -0.18
CCM2-213ENST00000480658 FAM43AQ8N2R8 423 aa13.95□□□□□ -0.18
CCM2-213ENST00000480658 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.95□□□□□ -0.18
CCM2-213ENST00000480658 CNKSR2Q8WXI2 1034 aa13.95□□□□□ -0.18
CCM2-213ENST00000480658 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.95□□□□□ -0.18
CCM2-213ENST00000480658 ZBTB40Q9NUA8 1239 aa13.95□□□□□ -0.18
CCM2-213ENST00000480658 PNMA3Q9UL41 463 aa13.95□□□□□ -0.18
CCM2-213ENST00000480658 AK9Q5TCS8 1911 aa13.95□□□□□ -0.18
CCM2-213ENST00000480658 DOCK1Q14185 1865 aa13.95□□□□□ -0.18
CCM2-213ENST00000480658 CYP2E1P05181 493 aaPredicted RBP13.94□□□□□ -0.18
CCM2-213ENST00000480658 IFIT2P09913 472 aaKnown RBP13.94□□□□□ -0.18
CCM2-213ENST00000480658 PTPRAP18433 802 aa13.94□□□□□ -0.18
CCM2-213ENST00000480658 TBC1D9Q6ZT07 1266 aa13.94□□□□□ -0.18
CCM2-213ENST00000480658 PROCA1Q8NCQ7 364 aaPredicted RBP13.94□□□□□ -0.18
CCM2-213ENST00000480658 RHPN1Q8TCX5 695 aa13.94□□□□□ -0.18
CCM2-213ENST00000480658 EAF2Q96CJ1 260 aaPredicted RBP13.94□□□□□ -0.18
CCM2-213ENST00000480658 PTPN22Q9Y2R2 807 aa13.94□□□□□ -0.18
CCM2-213ENST00000480658 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.94□□□□□ -0.18
CCM2-213ENST00000480658 ZHX2Q9Y6X8 837 aa13.94□□□□□ -0.18
CCM2-213ENST00000480658 A0A0G2JLL6 359 aaPredicted RBP13.93□□□□□ -0.18
CCM2-213ENST00000480658 DDTLA6NHG4 134 aaPredicted RBP13.93□□□□□ -0.18
CCM2-213ENST00000480658 PDHXO00330 501 aa13.93□□□□□ -0.18
CCM2-213ENST00000480658 IDH1O75874 414 aaKnown RBP13.93□□□□□ -0.18
CCM2-213ENST00000480658 LACTBP83111 547 aaPredicted RBP13.93□□□□□ -0.18
CCM2-213ENST00000480658 PRRT2Q7Z6L0 340 aaPredicted RBP13.93□□□□□ -0.18
CCM2-213ENST00000480658 CRACR2BQ8N4Y2 399 aaPredicted RBP13.93□□□□□ -0.18
CCM2-213ENST00000480658 CD99L2Q8TCZ2 262 aa13.93□□□□□ -0.18
CCM2-213ENST00000480658 R3HDMLQ9H3Y0 253 aa13.93□□□□□ -0.18
CCM2-213ENST00000480658 DDX4Q9NQI0 724 aaKnown RBP13.93□□□□□ -0.18
CCM2-213ENST00000480658 AATFQ9NY61 560 aaKnown RBP eCLIP13.93□□□□□ -0.18
CCM2-213ENST00000480658 EXOC6BQ9Y2D4 811 aa13.93□□□□□ -0.18
CCM2-213ENST00000480658 FLT1P17948 1338 aa13.92□□□□□ -0.18
CCM2-213ENST00000480658 ASNSP08243 561 aa13.92□□□□□ -0.18
CCM2-213ENST00000480658 ZAP70P43403 619 aa13.92□□□□□ -0.18
CCM2-213ENST00000480658 SH3BP5LQ7L8J4 393 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms