RNA–Protein interactions for RNA: ENST00000480624.5

MACF1-217, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-217ENST00000480624 NKX2-3Q8TAU0 364 aa13.42□□□□□ -0.26
MACF1-217ENST00000480624 ZBED3Q96IU2 234 aaPredicted RBP13.42□□□□□ -0.26
MACF1-217ENST00000480624 ALDH8A1Q9H2A2 487 aaPredicted RBP13.42□□□□□ -0.26
MACF1-217ENST00000480624 HDAC9Q9UKV0 1011 aa13.42□□□□□ -0.26
MACF1-217ENST00000480624 FLT1P17948 1338 aa13.41□□□□□ -0.26
MACF1-217ENST00000480624 SHTN1A0MZ66 631 aa13.41□□□□□ -0.26
MACF1-217ENST00000480624 SPDYE2BA6NHP3 402 aa13.41□□□□□ -0.26
MACF1-217ENST00000480624 FGRP09769 529 aa13.41□□□□□ -0.26
MACF1-217ENST00000480624 SPDYE6P0CI01 402 aa13.41□□□□□ -0.26
MACF1-217ENST00000480624 YY1P25490 414 aa13.41□□□□□ -0.26
MACF1-217ENST00000480624 SLC4A3P48751 1232 aa13.41□□□□□ -0.26
MACF1-217ENST00000480624 GMPSP49915 693 aaPredicted RBP13.41□□□□□ -0.26
MACF1-217ENST00000480624 ZNF280AP59817 542 aaPredicted RBP13.41□□□□□ -0.26
MACF1-217ENST00000480624 BECN1Q14457 450 aa13.41□□□□□ -0.26
MACF1-217ENST00000480624 AKNAD1Q5T1N1 836 aa13.41□□□□□ -0.26
MACF1-217ENST00000480624 C12orf60Q5U649 245 aa13.41□□□□□ -0.26
MACF1-217ENST00000480624 MB21D2Q8IYB1 491 aaPredicted RBP13.41□□□□□ -0.26
MACF1-217ENST00000480624 OGFOD1Q8N543 542 aa13.41□□□□□ -0.26
MACF1-217ENST00000480624 MTMR14Q8NCE2 650 aa13.41□□□□□ -0.26
MACF1-217ENST00000480624 STAG1Q8WVM7 1258 aa13.41□□□□□ -0.26
MACF1-217ENST00000480624 DPF2Q92785 391 aa13.41□□□□□ -0.26
MACF1-217ENST00000480624 DDX4Q9NQI0 724 aaKnown RBP13.41□□□□□ -0.26
MACF1-217ENST00000480624 PDRG1Q9NUG6 133 aa13.41□□□□□ -0.26
MACF1-217ENST00000480624 MCM9Q9NXL9 1143 aa13.41□□□□□ -0.26
MACF1-217ENST00000480624 ARPP21Q9UBL0 812 aaPredicted RBP13.41□□□□□ -0.26
MACF1-217ENST00000480624 GJA3Q9Y6H8 435 aa13.41□□□□□ -0.26
MACF1-217ENST00000480624 TIAM2Q8IVF5 1701 aa13.41□□□□□ -0.26
MACF1-217ENST00000480624 LAMA4Q16363 1823 aa13.41□□□□□ -0.26
MACF1-217ENST00000480624 NEDD4P46934 1319 aa13.4□□□□□ -0.26
MACF1-217ENST00000480624 HMGB1P09429 215 aaKnown RBP13.4□□□□□ -0.26
MACF1-217ENST00000480624 MMP14P50281 582 aa13.4□□□□□ -0.26
MACF1-217ENST00000480624 AK2P54819 239 aa13.4□□□□□ -0.26
MACF1-217ENST00000480624 NFIAQ12857 509 aa13.4□□□□□ -0.26
MACF1-217ENST00000480624 DLGAP5Q15398 846 aa13.4□□□□□ -0.26
MACF1-217ENST00000480624 GPR162Q16538 588 aa13.4□□□□□ -0.26
MACF1-217ENST00000480624 DHX32Q7L7V1 743 aaKnown RBP13.4□□□□□ -0.26
MACF1-217ENST00000480624 NCOA7Q8NI08 942 aa13.4□□□□□ -0.26
MACF1-217ENST00000480624 TCEANC2Q96MN5 208 aa13.4□□□□□ -0.26
MACF1-217ENST00000480624 IDI2Q9BXS1 227 aa13.4□□□□□ -0.26
MACF1-217ENST00000480624 TDRD3Q9H7E2 651 aaKnown RBP13.4□□□□□ -0.26
MACF1-217ENST00000480624 RNF181Q9P0P0 153 aa13.4□□□□□ -0.26
MACF1-217ENST00000480624 SAP30BPQ9UHR5 308 aaKnown RBP13.4□□□□□ -0.26
MACF1-217ENST00000480624 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.4□□□□□ -0.26
MACF1-217ENST00000480624 SBF1O95248 1867 aa13.4□□□□□ -0.26
MACF1-217ENST00000480624 K7ELQ4 463 aaPredicted RBP13.39□□□□□ -0.27
MACF1-217ENST00000480624 NPM3O75607 178 aaKnown RBP13.39□□□□□ -0.27
MACF1-217ENST00000480624 PLCD1P51178 756 aa13.39□□□□□ -0.27
MACF1-217ENST00000480624 CACNB3P54284 484 aa13.39□□□□□ -0.27
MACF1-217ENST00000480624 ANTXR2P58335 489 aa13.39□□□□□ -0.27
MACF1-217ENST00000480624 C9orf131Q5VYM1 1079 aa13.39□□□□□ -0.27
MACF1-217ENST00000480624 MFSD6Q6ZSS7 791 aa13.39□□□□□ -0.27
MACF1-217ENST00000480624 HSCBQ8IWL3 235 aa13.39□□□□□ -0.27
MACF1-217ENST00000480624 ZFPM1Q8IX07 1006 aa13.39□□□□□ -0.27
MACF1-217ENST00000480624 FAM198AQ9UFP1 575 aa13.39□□□□□ -0.27
MACF1-217ENST00000480624 DICER1Q9UPY3 1922 aaKnown RBP13.39□□□□□ -0.27
MACF1-217ENST00000480624 CDK5RAP2Q96SN8 1893 aa13.38□□□□□ -0.27
MACF1-217ENST00000480624 ROBO3Q96MS0 1386 aa13.38□□□□□ -0.27
MACF1-217ENST00000480624 B4E1Z4 1266 aa13.38□□□□□ -0.27
MACF1-217ENST00000480624 GRIN3BO60391 1043 aa13.38□□□□□ -0.27
MACF1-217ENST00000480624 POLR3DP05423 398 aaPredicted RBP13.38□□□□□ -0.27
MACF1-217ENST00000480624 MCM2P49736 904 aa13.38□□□□□ -0.27
MACF1-217ENST00000480624 PICALMQ13492 652 aa13.38□□□□□ -0.27
MACF1-217ENST00000480624 TOB2Q14106 344 aaPredicted RBP13.38□□□□□ -0.27
MACF1-217ENST00000480624 CYB5R4Q7L1T6 521 aa13.38□□□□□ -0.27
MACF1-217ENST00000480624 GPC2Q8N158 579 aa13.38□□□□□ -0.27
MACF1-217ENST00000480624 STK11IPQ8N1F8 1099 aa13.38□□□□□ -0.27
MACF1-217ENST00000480624 AGXT2Q9BYV1 514 aa13.38□□□□□ -0.27
MACF1-217ENST00000480624 OSBPL5Q9H0X9 879 aaPredicted RBP13.38□□□□□ -0.27
MACF1-217ENST00000480624 RNF41Q9H4P4 317 aaPredicted RBP13.38□□□□□ -0.27
MACF1-217ENST00000480624 CNNM2Q9H8M5 875 aa13.38□□□□□ -0.27
MACF1-217ENST00000480624 MYOZ2Q9NPC6 264 aa13.38□□□□□ -0.27
MACF1-217ENST00000480624 ZNF70Q9UC06 446 aaPredicted RBP13.38□□□□□ -0.27
MACF1-217ENST00000480624 CNOT7Q9UIV1 285 aaKnown RBP13.38□□□□□ -0.27
MACF1-217ENST00000480624 DDX60LQ5H9U9 1706 aaKnown RBP13.38□□□□□ -0.27
MACF1-217ENST00000480624 WDR19Q8NEZ3 1342 aa13.38□□□□□ -0.27
MACF1-217ENST00000480624 BAZ2AQ9UIF9 1905 aaKnown RBP13.37□□□□□ -0.27
MACF1-217ENST00000480624 PRC1O43663 620 aa13.37□□□□□ -0.27
MACF1-217ENST00000480624 ORC4O43929 436 aa13.37□□□□□ -0.27
MACF1-217ENST00000480624 EGFRP00533 1210 aa13.37□□□□□ -0.27
MACF1-217ENST00000480624 PCP11498 1178 aaKnown RBP13.37□□□□□ -0.27
MACF1-217ENST00000480624 MCM5P33992 734 aa13.37□□□□□ -0.27
MACF1-217ENST00000480624 TRDNQ13061 729 aa13.37□□□□□ -0.27
MACF1-217ENST00000480624 SLC4A8Q2Y0W8 1093 aa13.37□□□□□ -0.27
MACF1-217ENST00000480624 SPDYE2Q495Y8 402 aa13.37□□□□□ -0.27
MACF1-217ENST00000480624 Q6ZUG5 572 aa13.37□□□□□ -0.27
MACF1-217ENST00000480624 CHST3Q7LGC8 479 aa13.37□□□□□ -0.27
MACF1-217ENST00000480624 RALYLQ86SE5 291 aaKnown RBP13.37□□□□□ -0.27
MACF1-217ENST00000480624 MICALL2Q8IY33 904 aa13.37□□□□□ -0.27
MACF1-217ENST00000480624 FBXL16Q8N461 479 aa13.37□□□□□ -0.27
MACF1-217ENST00000480624 DYNLL2Q96FJ2 89 aa13.37□□□□□ -0.27
MACF1-217ENST00000480624 LARP6Q9BRS8 491 aaKnown RBP13.37□□□□□ -0.27
MACF1-217ENST00000480624 LRRC2Q9BYS8 371 aa13.37□□□□□ -0.27
MACF1-217ENST00000480624 KRT23Q9C075 422 aa13.37□□□□□ -0.27
MACF1-217ENST00000480624 ZSWIM5Q9P217 1185 aa13.37□□□□□ -0.27
MACF1-217ENST00000480624 FOCADQ5VW36 1801 aa13.36□□□□□ -0.27
MACF1-217ENST00000480624 NAV1Q8NEY1 1877 aa13.36□□□□□ -0.27
MACF1-217ENST00000480624 WNT10BO00744 389 aa13.36□□□□□ -0.27
MACF1-217ENST00000480624 KDM4AO75164 1064 aa13.36□□□□□ -0.27
MACF1-217ENST00000480624 ENTPD3O75355 529 aa13.36□□□□□ -0.27
MACF1-217ENST00000480624 SLC3A2P08195 630 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms