RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 TNS1Q9HBL0 1735 aaKnown RBP11.67□□□□□ -0.54
COMMD4-203ENST00000480484 ERCC5P28715 1186 aaPredicted RBP11.67□□□□□ -0.54
COMMD4-203ENST00000480484 APOBRQ0VD83 1088 aa11.67□□□□□ -0.54
COMMD4-203ENST00000480484 SCRN1Q12765 414 aa11.67□□□□□ -0.54
COMMD4-203ENST00000480484 CCDC93Q567U6 631 aa11.67□□□□□ -0.54
COMMD4-203ENST00000480484 SH3D19Q5HYK7 790 aa11.67□□□□□ -0.54
COMMD4-203ENST00000480484 TANGO6Q9C0B7 1094 aa11.67□□□□□ -0.54
COMMD4-203ENST00000480484 MAF1Q9H063 256 aa11.67□□□□□ -0.54
COMMD4-203ENST00000480484 LCMT1Q9UIC8 334 aa11.67□□□□□ -0.54
COMMD4-203ENST00000480484 GNEQ9Y223 722 aaKnown RBP11.67□□□□□ -0.54
COMMD4-203ENST00000480484 SCN11AQ9UI33 1791 aa11.67□□□□□ -0.54
COMMD4-203ENST00000480484 DDX58O95786 925 aaKnown RBP11.67□□□□□ -0.54
COMMD4-203ENST00000480484 LMAN1P49257 510 aa11.67□□□□□ -0.54
COMMD4-203ENST00000480484 TTLL5Q6EMB2 1281 aa11.67□□□□□ -0.54
COMMD4-203ENST00000480484 USP28Q96RU2 1077 aa11.67□□□□□ -0.54
COMMD4-203ENST00000480484 ZRANB2O95218 330 aaKnown RBP eCLIP11.66□□□□□ -0.54
COMMD4-203ENST00000480484 CTDNEP1O95476 244 aa11.66□□□□□ -0.54
COMMD4-203ENST00000480484 EVCP57679 992 aa11.66□□□□□ -0.54
COMMD4-203ENST00000480484 SMC1AQ14683 1233 aaKnown RBP11.66□□□□□ -0.54
COMMD4-203ENST00000480484 LRP10Q7Z4F1 713 aa11.66□□□□□ -0.54
COMMD4-203ENST00000480484 KCNB2Q92953 911 aa11.66□□□□□ -0.54
COMMD4-203ENST00000480484 A0A1B0GVL5 298 aa11.66□□□□□ -0.54
COMMD4-203ENST00000480484 UBE2Q2LH0YL09 131 aa11.66□□□□□ -0.54
COMMD4-203ENST00000480484 SASH3O75995 380 aa11.66□□□□□ -0.54
COMMD4-203ENST00000480484 SCNN1AP37088 669 aa11.66□□□□□ -0.54
COMMD4-203ENST00000480484 ETF1P62495 437 aaKnown RBP11.66□□□□□ -0.54
COMMD4-203ENST00000480484 MYBPC2Q14324 1141 aa11.66□□□□□ -0.54
COMMD4-203ENST00000480484 GCKRQ14397 625 aa11.66□□□□□ -0.54
COMMD4-203ENST00000480484 ILDR1Q86SU0 546 aaPredicted RBP11.66□□□□□ -0.54
COMMD4-203ENST00000480484 MTMR14Q8NCE2 650 aa11.66□□□□□ -0.54
COMMD4-203ENST00000480484 CCDC150Q8NCX0 1101 aa11.66□□□□□ -0.54
COMMD4-203ENST00000480484 HELBQ8NG08 1087 aaPredicted RBP11.66□□□□□ -0.54
COMMD4-203ENST00000480484 TBC1D2BQ9UPU7 963 aa11.66□□□□□ -0.54
COMMD4-203ENST00000480484 MYO1CO00159 1063 aa11.65□□□□□ -0.54
COMMD4-203ENST00000480484 CYP21A2P08686 494 aa11.65□□□□□ -0.54
COMMD4-203ENST00000480484 ADD1P35611 737 aaKnown RBP11.65□□□□□ -0.54
COMMD4-203ENST00000480484 G3BP1Q13283 466 aaKnown RBP eCLIP11.65□□□□□ -0.542e-6■□□□□ 9.5
COMMD4-203ENST00000480484 DPCR1Q3MIW9 517 aa11.65□□□□□ -0.54
COMMD4-203ENST00000480484 IFNL2Q8IZJ0 200 aa11.65□□□□□ -0.54
COMMD4-203ENST00000480484 OSBPL5Q9H0X9 879 aaPredicted RBP11.65□□□□□ -0.54
COMMD4-203ENST00000480484 UTYO14607 1347 aa11.65□□□□□ -0.54
COMMD4-203ENST00000480484 TNS3Q68CZ2 1445 aa11.65□□□□□ -0.54
COMMD4-203ENST00000480484 SDE2Q6IQ49 451 aa11.65□□□□□ -0.54
COMMD4-203ENST00000480484 TSHZ1Q6ZSZ6 1077 aa11.65□□□□□ -0.54
COMMD4-203ENST00000480484 ZSCAN16Q9H4T2 348 aaPredicted RBP11.65□□□□□ -0.54
COMMD4-203ENST00000480484 SLIT2O94813 1529 aa11.65□□□□□ -0.54
COMMD4-203ENST00000480484 TLDC2A0PJX2 215 aa11.65□□□□□ -0.54
COMMD4-203ENST00000480484 PSDA5PKW4 1024 aaPredicted RBP11.65□□□□□ -0.54
COMMD4-203ENST00000480484 LMOD1P29536 600 aaPredicted RBP11.65□□□□□ -0.54
COMMD4-203ENST00000480484 FAM160A1Q05DH4 1040 aa11.65□□□□□ -0.54
COMMD4-203ENST00000480484 MAP2K5Q13163 448 aa11.65□□□□□ -0.54
COMMD4-203ENST00000480484 UBE3BQ7Z3V4 1068 aa11.65□□□□□ -0.54
COMMD4-203ENST00000480484 IMPACTQ9P2X3 320 aa11.65□□□□□ -0.54
COMMD4-203ENST00000480484 DBNLQ9UJU6 430 aaKnown RBP11.65□□□□□ -0.54
COMMD4-203ENST00000480484 CCDC189A1A4V9 331 aa11.64□□□□□ -0.55
COMMD4-203ENST00000480484 TAF5LO75529 589 aa11.64□□□□□ -0.55
COMMD4-203ENST00000480484 POLR3DP05423 398 aaPredicted RBP11.64□□□□□ -0.55
COMMD4-203ENST00000480484 C7P10643 843 aa11.64□□□□□ -0.55
COMMD4-203ENST00000480484 TTC5Q8N0Z6 440 aa11.64□□□□□ -0.55
COMMD4-203ENST00000480484 METTL22Q9BUU2 404 aaPredicted RBP11.64□□□□□ -0.55
COMMD4-203ENST00000480484 BCL9O00512 1426 aa11.64□□□□□ -0.55
COMMD4-203ENST00000480484 WDHD1O75717 1129 aaPredicted RBP11.64□□□□□ -0.55
COMMD4-203ENST00000480484 ERCC3P19447 782 aa11.64□□□□□ -0.55
COMMD4-203ENST00000480484 ANKRD13DQ6ZTN6 518 aa11.64□□□□□ -0.55
COMMD4-203ENST00000480484 DBNDD2Q9BQY9 259 aa11.64□□□□□ -0.55
COMMD4-203ENST00000480484 UTP14AQ9BVJ6 771 aaKnown RBP11.64□□□□□ -0.55
COMMD4-203ENST00000480484 CWC15Q9P013 229 aaKnown RBP11.64□□□□□ -0.55
COMMD4-203ENST00000480484 CPDO75976 1380 aa11.64□□□□□ -0.55
COMMD4-203ENST00000480484 TADA3O75528 432 aa11.64□□□□□ -0.55
COMMD4-203ENST00000480484 TBC1D8O95759 1140 aa11.64□□□□□ -0.55
COMMD4-203ENST00000480484 NEXNQ0ZGT2 675 aa11.64□□□□□ -0.55
COMMD4-203ENST00000480484 TFCP2Q12800 502 aa11.64□□□□□ -0.55
COMMD4-203ENST00000480484 CABP4P57796 275 aa11.63□□□□□ -0.55
COMMD4-203ENST00000480484 HAND2P61296 217 aa11.63□□□□□ -0.55
COMMD4-203ENST00000480484 ERC1Q8IUD2 1116 aa11.63□□□□□ -0.55
COMMD4-203ENST00000480484 CCDC85AQ96PX6 553 aaPredicted RBP11.63□□□□□ -0.55
COMMD4-203ENST00000480484 ZSWIM4Q9H7M6 989 aa11.63□□□□□ -0.55
COMMD4-203ENST00000480484 SNRPA1P09661 255 aaKnown RBP11.63□□□□□ -0.55
COMMD4-203ENST00000480484 ATP1A3P13637 1013 aa11.63□□□□□ -0.55
COMMD4-203ENST00000480484 RHBDL3P58872 404 aa11.63□□□□□ -0.55
COMMD4-203ENST00000480484 PHLDB3Q6NSJ2 640 aa11.63□□□□□ -0.55
COMMD4-203ENST00000480484 KCND1Q9NSA2 647 aa11.63□□□□□ -0.55
COMMD4-203ENST00000480484 GNL3LQ9NVN8 582 aaKnown RBP11.63□□□□□ -0.55
COMMD4-203ENST00000480484 DMGDHQ9UI17 866 aaKnown RBP11.63□□□□□ -0.55
COMMD4-203ENST00000480484 RCOR1Q9UKL0 485 aa11.63□□□□□ -0.55
COMMD4-203ENST00000480484 ANKRD33BA6NCL7 494 aa11.62□□□□□ -0.55
COMMD4-203ENST00000480484 DCAF8L1A6NGE4 600 aa11.62□□□□□ -0.55
COMMD4-203ENST00000480484 TFRCP02786 760 aaKnown RBP11.62□□□□□ -0.55
COMMD4-203ENST00000480484 RXRAP19793 462 aa11.62□□□□□ -0.55
COMMD4-203ENST00000480484 EVA1CP58658 441 aa11.62□□□□□ -0.55
COMMD4-203ENST00000480484 MUM1L1Q5H9M0 696 aa11.62□□□□□ -0.55
COMMD4-203ENST00000480484 CC2D1AQ6P1N0 951 aaPredicted RBP11.62□□□□□ -0.55
COMMD4-203ENST00000480484 DCAF5Q96JK2 942 aa11.62□□□□□ -0.55
COMMD4-203ENST00000480484 AIFM3Q96NN9 605 aa11.62□□□□□ -0.55
COMMD4-203ENST00000480484 NEK1Q96PY6 1258 aa11.62□□□□□ -0.55
COMMD4-203ENST00000480484 ARFGAP3Q9NP61 516 aa11.62□□□□□ -0.55
COMMD4-203ENST00000480484 ZNF609O15014 1411 aa11.62□□□□□ -0.55
COMMD4-203ENST00000480484 EFCAB8A8MWE9 144 aa11.62□□□□□ -0.55
COMMD4-203ENST00000480484 HIP1O00291 1037 aa11.62□□□□□ -0.55
COMMD4-203ENST00000480484 PYGBP11216 843 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms