RNA–Protein interactions for RNA: ENST00000480016.1

EFEMP1-211, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 2

Gene EFEMP1, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-211ENST00000480016 RUNDC1Q96C34 613 aa10.64□□□□□ -0.71
EFEMP1-211ENST00000480016 RBM17Q96I25 401 aaKnown RBP10.64□□□□□ -0.71
EFEMP1-211ENST00000480016 SH2B1Q9NRF2 756 aaPredicted RBP10.64□□□□□ -0.71
EFEMP1-211ENST00000480016 GCN1Q92616 2671 aaKnown RBP10.64□□□□□ -0.71
EFEMP1-211ENST00000480016 DDX60LQ5H9U9 1706 aaKnown RBP10.64□□□□□ -0.71
EFEMP1-211ENST00000480016 FMNL1O95466 1100 aaPredicted RBP10.63□□□□□ -0.71
EFEMP1-211ENST00000480016 ELNP15502 786 aa10.63□□□□□ -0.71
EFEMP1-211ENST00000480016 CAMK2BQ13554 666 aa10.63□□□□□ -0.71
EFEMP1-211ENST00000480016 NEUROD2Q15784 382 aa10.63□□□□□ -0.71
EFEMP1-211ENST00000480016 DPP8Q6V1X1 898 aaPredicted RBP10.63□□□□□ -0.71
EFEMP1-211ENST00000480016 ASCL5Q7RTU5 278 aa10.63□□□□□ -0.71
EFEMP1-211ENST00000480016 PODNQ7Z5L7 613 aa10.63□□□□□ -0.71
EFEMP1-211ENST00000480016 HELBQ8NG08 1087 aaPredicted RBP10.63□□□□□ -0.71
EFEMP1-211ENST00000480016 NECTIN2Q92692 538 aa10.63□□□□□ -0.71
EFEMP1-211ENST00000480016 NLRP3Q96P20 1036 aa10.63□□□□□ -0.71
EFEMP1-211ENST00000480016 LRRC37A2A6NM11 1700 aa10.63□□□□□ -0.71
EFEMP1-211ENST00000480016 DNAH14Q0VDD8 3507 aa10.63□□□□□ -0.71
EFEMP1-211ENST00000480016 ADCY3O60266 1144 aa10.62□□□□□ -0.71
EFEMP1-211ENST00000480016 VIL1P09327 827 aaKnown RBP10.62□□□□□ -0.71
EFEMP1-211ENST00000480016 COL6A1P12109 1028 aa10.62□□□□□ -0.71
EFEMP1-211ENST00000480016 SUSD4Q5VX71 490 aa10.62□□□□□ -0.71
EFEMP1-211ENST00000480016 C17orf99Q6UX52 265 aa10.62□□□□□ -0.71
EFEMP1-211ENST00000480016 DGLUCYQ7Z3D6 616 aa10.62□□□□□ -0.71
EFEMP1-211ENST00000480016 ZNF34Q8IZ26 560 aa10.62□□□□□ -0.71
EFEMP1-211ENST00000480016 UTP14AQ9BVJ6 771 aaKnown RBP10.62□□□□□ -0.71
EFEMP1-211ENST00000480016 GABRQQ9UN88 632 aa10.62□□□□□ -0.71
EFEMP1-211ENST00000480016 LAS1LQ9Y4W2 734 aaKnown RBP10.62□□□□□ -0.71
EFEMP1-211ENST00000480016 NUP98P52948 1817 aa10.62□□□□□ -0.71
EFEMP1-211ENST00000480016 USP9XQ93008 2570 aaPredicted RBP10.62□□□□□ -0.71
EFEMP1-211ENST00000480016 HRO43593 1189 aa10.61□□□□□ -0.71
EFEMP1-211ENST00000480016 CCDC146Q8IYE0 955 aa10.61□□□□□ -0.71
EFEMP1-211ENST00000480016 ZDHHC16Q969W1 377 aa10.61□□□□□ -0.71
EFEMP1-211ENST00000480016 MFSD14AQ96MC6 490 aa10.61□□□□□ -0.71
EFEMP1-211ENST00000480016 DBNDD1Q9H9R9 158 aa10.61□□□□□ -0.71
EFEMP1-211ENST00000480016 UBN2Q6ZU65 1347 aa10.6□□□□□ -0.71
EFEMP1-211ENST00000480016 UNCXA6NJT0 531 aa10.6□□□□□ -0.71
EFEMP1-211ENST00000480016 CHL1O00533 1208 aa10.6□□□□□ -0.71
EFEMP1-211ENST00000480016 NTSR2O95665 410 aa10.6□□□□□ -0.71
EFEMP1-211ENST00000480016 PTPREP23469 700 aa10.6□□□□□ -0.71
EFEMP1-211ENST00000480016 CALD1Q05682 793 aaKnown RBP10.6□□□□□ -0.71
EFEMP1-211ENST00000480016 AIMP1Q12904 312 aaKnown RBP10.6□□□□□ -0.71
EFEMP1-211ENST00000480016 NBPF9Q3BBW0 867 aa10.6□□□□□ -0.71
EFEMP1-211ENST00000480016 COPS6Q7L5N1 327 aa10.6□□□□□ -0.71
EFEMP1-211ENST00000480016 PXYLP1Q8TE99 480 aa10.6□□□□□ -0.71
EFEMP1-211ENST00000480016 TIFAQ96CG3 184 aa10.6□□□□□ -0.71
EFEMP1-211ENST00000480016 CHMP4AQ9BY43 222 aa10.6□□□□□ -0.71
EFEMP1-211ENST00000480016 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.6□□□□□ -0.71
EFEMP1-211ENST00000480016 MYOZ2Q9NPC6 264 aa10.6□□□□□ -0.71
EFEMP1-211ENST00000480016 ABCC12Q96J65 1359 aa10.6□□□□□ -0.71
EFEMP1-211ENST00000480016 COL4A6Q14031 1691 aa10.6□□□□□ -0.71
EFEMP1-211ENST00000480016 PLXNA3P51805 1871 aa10.59□□□□□ -0.71
EFEMP1-211ENST00000480016 SOWAHBA6NEL2 793 aa10.59□□□□□ -0.71
EFEMP1-211ENST00000480016 PROB1E7EW31 1015 aa10.59□□□□□ -0.71
EFEMP1-211ENST00000480016 HOXB7P09629 217 aa10.59□□□□□ -0.71
EFEMP1-211ENST00000480016 PDIA6Q15084 440 aa10.59□□□□□ -0.71
EFEMP1-211ENST00000480016 SLC10A5Q5PT55 438 aa10.59□□□□□ -0.71
EFEMP1-211ENST00000480016 RMDN1Q96DB5 314 aa10.59□□□□□ -0.71
EFEMP1-211ENST00000480016 ADAMTS8Q9UP79 889 aa10.59□□□□□ -0.71
EFEMP1-211ENST00000480016 CHD9Q3L8U1 2897 aa10.59□□□□□ -0.71
EFEMP1-211ENST00000480016 ZFYVE26Q68DK2 2539 aa10.58□□□□□ -0.72
EFEMP1-211ENST00000480016 CCL15-CCL14A0A0B4J2E2 113 aa10.58□□□□□ -0.72
EFEMP1-211ENST00000480016 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.58□□□□□ -0.72
EFEMP1-211ENST00000480016 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.58□□□□□ -0.72
EFEMP1-211ENST00000480016 BBOX1O75936 387 aa10.58□□□□□ -0.72
EFEMP1-211ENST00000480016 CCL15Q16663 113 aa10.58□□□□□ -0.72
EFEMP1-211ENST00000480016 HDGFL1Q5TGJ6 251 aa10.58□□□□□ -0.72
EFEMP1-211ENST00000480016 DDX46Q7L014 1031 aaKnown RBP10.58□□□□□ -0.72
EFEMP1-211ENST00000480016 GJD3Q8N144 294 aa10.58□□□□□ -0.72
EFEMP1-211ENST00000480016 XAGE3Q8WTP9 111 aa10.58□□□□□ -0.72
EFEMP1-211ENST00000480016 SLC4A5Q9BY07 1137 aa10.58□□□□□ -0.72
EFEMP1-211ENST00000480016 ADAM33Q9BZ11 813 aa10.58□□□□□ -0.72
EFEMP1-211ENST00000480016 ALG13Q9NP73 1137 aaKnown RBP10.58□□□□□ -0.72
EFEMP1-211ENST00000480016 DBF4Q9UBU7 674 aaPredicted RBP10.58□□□□□ -0.72
EFEMP1-211ENST00000480016 TRMT112Q9UI30 125 aaKnown RBP10.58□□□□□ -0.72
EFEMP1-211ENST00000480016 OGDHLQ9ULD0 1010 aa10.58□□□□□ -0.72
EFEMP1-211ENST00000480016 VPS9D1Q9Y2B5 631 aa10.58□□□□□ -0.72
EFEMP1-211ENST00000480016 LTBP2Q14767 1821 aa10.58□□□□□ -0.72
EFEMP1-211ENST00000480016 MYO15AQ9UKN7 3530 aa10.57□□□□□ -0.72
EFEMP1-211ENST00000480016 ANXA1P04083 346 aa10.57□□□□□ -0.72
EFEMP1-211ENST00000480016 HSP90B1P14625 803 aaKnown RBP10.57□□□□□ -0.72
EFEMP1-211ENST00000480016 PROSER3Q2NL68 480 aa10.57□□□□□ -0.72
EFEMP1-211ENST00000480016 TMC4Q7Z404 712 aa10.57□□□□□ -0.72
EFEMP1-211ENST00000480016 LRP10Q7Z4F1 713 aa10.57□□□□□ -0.72
EFEMP1-211ENST00000480016 NLRP10Q86W26 655 aa10.57□□□□□ -0.72
EFEMP1-211ENST00000480016 SP8Q8IXZ3 490 aa10.57□□□□□ -0.72
EFEMP1-211ENST00000480016 PLBD2Q8NHP8 589 aa10.57□□□□□ -0.72
EFEMP1-211ENST00000480016 PRKRIP1Q9H875 184 aaPredicted RBP10.57□□□□□ -0.72
EFEMP1-211ENST00000480016 HYPKQ9NX55 129 aa10.57□□□□□ -0.72
EFEMP1-211ENST00000480016 SH3TC1Q8TE82 1336 aa10.57□□□□□ -0.72
EFEMP1-211ENST00000480016 SOBPA7XYQ1 873 aa10.56□□□□□ -0.72
EFEMP1-211ENST00000480016 HERVK_113Q902F9 699 aa10.56□□□□□ -0.72
EFEMP1-211ENST00000480016 ZKSCAN4Q969J2 545 aaPredicted RBP10.56□□□□□ -0.72
EFEMP1-211ENST00000480016 PRRX2Q99811 253 aa10.56□□□□□ -0.72
EFEMP1-211ENST00000480016 CHPF2Q9P2E5 772 aa10.56□□□□□ -0.72
EFEMP1-211ENST00000480016 CPA4Q9UI42 421 aa10.56□□□□□ -0.72
EFEMP1-211ENST00000480016 DNAH12Q6ZR08 3092 aa10.55□□□□□ -0.72
EFEMP1-211ENST00000480016 PRR23AA6NEV1 266 aa10.55□□□□□ -0.72
EFEMP1-211ENST00000480016 DPYSL4O14531 572 aa10.55□□□□□ -0.72
EFEMP1-211ENST00000480016 WDHD1O75717 1129 aaPredicted RBP10.55□□□□□ -0.72
EFEMP1-211ENST00000480016 HCLS1P14317 486 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms