RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 NCBP1Q09161 790 aaKnown RBP6.87□□□□□ -1.31
CPS1-207ENST00000479988 CUL4AQ13619 759 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 TMCO4Q5TGY1 634 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 CCDC82Q8N4S0 544 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 RAET1EQ8TD07 263 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 APPBP2Q92624 585 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 CCDC102AQ96A19 550 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 ZNF396Q96N95 335 aaPredicted RBP6.87□□□□□ -1.31
CPS1-207ENST00000479988 CNPY2Q9Y2B0 182 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 ASNSP08243 561 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 CALM1P0DP23 149 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 CALM2P0DP24 149 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 CALM3P0DP25 149 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 RASSF7Q02833 373 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 ABCB5Q2M3G0 1257 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 STRIP1Q5VSL9 837 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 NCAPG2Q86XI2 1143 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 ANKRD20A12PQ8NF67 263 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 ARPP21Q9UBL0 812 aaPredicted RBP6.87□□□□□ -1.31
CPS1-207ENST00000479988 MINPP1Q9UNW1 487 aa6.87□□□□□ -1.31
CPS1-207ENST00000479988 FLOT1O75955 427 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 MCM5P33992 734 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 MMP14P50281 582 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 UBXN2AP68543 259 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 STK3Q13188 491 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 SF3B3Q15393 1217 aaKnown RBP6.86□□□□□ -1.31
CPS1-207ENST00000479988 TMEM266Q2M3C6 531 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 CCDC148Q8NFR7 591 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 ZFYVE28Q9HCC9 887 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 MED1Q15648 1581 aaPredicted RBP6.86□□□□□ -1.31
CPS1-207ENST00000479988 XRN1Q8IZH2 1706 aaKnown RBP6.86□□□□□ -1.31
CPS1-207ENST00000479988 NOP56O00567 594 aaKnown RBP6.86□□□□□ -1.31
CPS1-207ENST00000479988 ZSCAN22P10073 491 aaPredicted RBP6.86□□□□□ -1.31
CPS1-207ENST00000479988 CRKP46108 304 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 GPSM2P81274 684 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 AGBL3Q8NEM8 1001 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 GPR101Q96P66 508 aaPredicted RBP6.86□□□□□ -1.31
CPS1-207ENST00000479988 ISCA1Q9BUE6 129 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 PI4KBQ9UBF8 816 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 CCDC39Q9UFE4 941 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 MEGF6O75095 1541 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 TOPAZ1Q8N9V7 1692 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 DISP2A7MBM2 1401 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 RGS12O14924 1447 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 PNPLA7Q6ZV29 1317 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 CACNA1FO60840 1977 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 FMN2Q9NZ56 1722 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 NBPF26B4DH59 902 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 ICA1Q05084 483 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 FAM47CQ5HY64 1035 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 DNTTIP2Q5QJE6 756 aaKnown RBP6.86□□□□□ -1.31
CPS1-207ENST00000479988 CHADLQ6NUI6 762 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 NBPF10Q6P3W6 841 aaKnown RBP6.86□□□□□ -1.31
CPS1-207ENST00000479988 FASTKD5Q7L8L6 764 aaKnown RBP6.86□□□□□ -1.31
CPS1-207ENST00000479988 NBPF11Q86T75 865 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 ANKRD35Q8N283 1001 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 NBPF15Q8N660 670 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 TBC1D16Q8TBP0 767 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 NEK1Q96PY6 1258 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 ARMT1Q9H993 441 aa6.86□□□□□ -1.31
CPS1-207ENST00000479988 GBA2Q9HCG7 927 aaPredicted RBP6.86□□□□□ -1.31
CPS1-207ENST00000479988 RGL2O15211 777 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 DDNO94850 711 aaPredicted RBP6.85□□□□□ -1.31
CPS1-207ENST00000479988 SRGNP10124 158 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 ANGEL2Q5VTE6 544 aaKnown RBP6.85□□□□□ -1.31
CPS1-207ENST00000479988 CREB3L3Q68CJ9 461 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 INTS5Q6P9B9 1019 aaKnown RBP6.85□□□□□ -1.31
CPS1-207ENST00000479988 RSBN1LQ6PCB5 846 aaPredicted RBP6.85□□□□□ -1.31
CPS1-207ENST00000479988 FAM177A1Q8N128 213 aaPredicted RBP6.85□□□□□ -1.31
CPS1-207ENST00000479988 RRP36Q96EU6 259 aaKnown RBP6.85□□□□□ -1.31
CPS1-207ENST00000479988 OTUD5Q96G74 571 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 HELLSQ9NRZ9 838 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 SNX14Q9Y5W7 946 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 BCL9O00512 1426 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 ZNF142P52746 1687 aaPredicted RBP6.85□□□□□ -1.31
CPS1-207ENST00000479988 PXDNQ92626 1479 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 PTPDC1A2A3K4 754 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 TRIM75PA6NK02 468 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 CAPN15O75808 1086 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 ALDH1A1P00352 501 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 PARP1P09874 1014 aaKnown RBP6.85□□□□□ -1.31
CPS1-207ENST00000479988 RFX1P22670 979 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 UBE2HP62256 183 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 UVSSAQ2YD98 709 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 CCDC183Q5T5S1 534 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 CCDC73Q6ZRK6 1079 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 RUFY3Q7L099 469 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 MICU3Q86XE3 530 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 FOXP4Q8IVH2 680 aaPredicted RBP6.85□□□□□ -1.31
CPS1-207ENST00000479988 CCDC83Q8IWF9 413 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 TDRD3Q9H7E2 651 aaKnown RBP6.85□□□□□ -1.31
CPS1-207ENST00000479988 MKRN1Q9UHC7 482 aaKnown RBP6.85□□□□□ -1.31
CPS1-207ENST00000479988 KCNH4Q9UQ05 1017 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 H7C1W4 665 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 LPXNO60711 386 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 ZAP70P43403 619 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 MAP3K9P80192 1104 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 NMIQ13287 307 aaPredicted RBP6.85□□□□□ -1.31
CPS1-207ENST00000479988 LRRC24Q50LG9 513 aa6.85□□□□□ -1.31
CPS1-207ENST00000479988 ZNF34Q8IZ26 560 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms