RNA–Protein interactions for RNA: ENST00000479795.1

TNXB-204, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 2,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-204ENST00000479795 C4AP0C0L4 1744 aa20.1■□□□□ 0.81
TNXB-204ENST00000479795 C4BP0C0L5 1744 aa20.1■□□□□ 0.81
TNXB-204ENST00000479795 CHAF1AQ13111 956 aaPredicted RBP20.1■□□□□ 0.81
TNXB-204ENST00000479795 ITPK1Q13572 414 aa20.1■□□□□ 0.81
TNXB-204ENST00000479795 NTRK3Q16288 839 aa20.1■□□□□ 0.81
TNXB-204ENST00000479795 CLIC6Q96NY7 704 aa20.1■□□□□ 0.81
TNXB-204ENST00000479795 SLC4A4Q9Y6R1 1079 aa20.1■□□□□ 0.81
TNXB-204ENST00000479795 NUTM2BA6NNL0 878 aaPredicted RBP20.09■□□□□ 0.81
TNXB-204ENST00000479795 NUTM2EB1AL46 878 aaPredicted RBP20.09■□□□□ 0.81
TNXB-204ENST00000479795 CDKL5O76039 1030 aa20.09■□□□□ 0.81
TNXB-204ENST00000479795 DDB1Q16531 1140 aa20.09■□□□□ 0.81
TNXB-204ENST00000479795 NUTM2AQ8IVF1 878 aaPredicted RBP20.09■□□□□ 0.81
TNXB-204ENST00000479795 LRRC8AQ8IWT6 810 aa20.09■□□□□ 0.81
TNXB-204ENST00000479795 MRFAP1L1Q96HT8 127 aa20.09■□□□□ 0.81
TNXB-204ENST00000479795 CCDC69A6NI79 296 aa20.09■□□□□ 0.81
TNXB-204ENST00000479795 SLC39A14Q15043 492 aa20.09■□□□□ 0.81
TNXB-204ENST00000479795 NAT10Q9H0A0 1025 aaKnown RBP20.09■□□□□ 0.81
TNXB-204ENST00000479795 LRP2BPQ9P2M1 347 aa20.09■□□□□ 0.81
TNXB-204ENST00000479795 DDX60Q8IY21 1712 aaKnown RBP20.08■□□□□ 0.81
TNXB-204ENST00000479795 LOC102724428A0A0B4J2F2 783 aa20.08■□□□□ 0.81
TNXB-204ENST00000479795 SMIM22K7EJ46 135 aa20.08■□□□□ 0.81
TNXB-204ENST00000479795 CAMTA2O94983 1202 aa20.08■□□□□ 0.81
TNXB-204ENST00000479795 CDC25BP30305 580 aa20.08■□□□□ 0.81
TNXB-204ENST00000479795 GUCY1A2P33402 732 aa20.08■□□□□ 0.81
TNXB-204ENST00000479795 IGHMBP2P38935 993 aaKnown RBP20.08■□□□□ 0.81
TNXB-204ENST00000479795 SIK1P57059 783 aa20.08■□□□□ 0.81
TNXB-204ENST00000479795 MFSD6Q6ZSS7 791 aa20.08■□□□□ 0.81
TNXB-204ENST00000479795 CCDC152Q4G0S7 254 aa20.08■□□□□ 0.8
TNXB-204ENST00000479795 AKNAD1Q5T1N1 836 aa20.08■□□□□ 0.8
TNXB-204ENST00000479795 ABCF2Q9UG63 623 aa20.08■□□□□ 0.8
TNXB-204ENST00000479795 CDK11BP21127 795 aaKnown RBP20.07■□□□□ 0.8
TNXB-204ENST00000479795 CMA1P23946 247 aa20.07■□□□□ 0.8
TNXB-204ENST00000479795 CHRNDQ07001 517 aa20.07■□□□□ 0.8
TNXB-204ENST00000479795 TRIM29Q14134 588 aa20.07■□□□□ 0.8
TNXB-204ENST00000479795 ALX1Q15699 326 aa20.07■□□□□ 0.8
TNXB-204ENST00000479795 TPD52L1Q16890 204 aaPredicted RBP20.07■□□□□ 0.8
TNXB-204ENST00000479795 USP27XA6NNY8 438 aa20.06■□□□□ 0.8
TNXB-204ENST00000479795 SPECC1Q5M775 1068 aa20.06■□□□□ 0.8
TNXB-204ENST00000479795 SHC4Q6S5L8 630 aa20.06■□□□□ 0.8
TNXB-204ENST00000479795 SGMS1Q86VZ5 419 aa20.06■□□□□ 0.8
TNXB-204ENST00000479795 SDR42E1Q8WUS8 393 aa20.06■□□□□ 0.8
TNXB-204ENST00000479795 KCNJ14Q9UNX9 436 aa20.06■□□□□ 0.8
TNXB-204ENST00000479795 DOT1LQ8TEK3 1739 aa20.06■□□□□ 0.8
TNXB-204ENST00000479795 TNNT1P13805 278 aa20.06■□□□□ 0.8
TNXB-204ENST00000479795 SYKP43405 635 aa20.06■□□□□ 0.8
TNXB-204ENST00000479795 MARCH10Q8NA82 808 aaPredicted RBP20.06■□□□□ 0.8
TNXB-204ENST00000479795 FEZ1Q99689 392 aa20.06■□□□□ 0.8
TNXB-204ENST00000479795 SSRP1Q08945 709 aaKnown RBP20.05■□□□□ 0.8
TNXB-204ENST00000479795 ADGRA1Q86SQ6 560 aa20.05■□□□□ 0.8
TNXB-204ENST00000479795 MINDY4BA8MYZ0 360 aa20.05■□□□□ 0.8
TNXB-204ENST00000479795 SMC2O95347 1197 aa20.05■□□□□ 0.8
TNXB-204ENST00000479795 NTSR2O95665 410 aa20.05■□□□□ 0.8
TNXB-204ENST00000479795 SKILP12757 684 aa20.05■□□□□ 0.8
TNXB-204ENST00000479795 PTPAQ15257 358 aa20.05■□□□□ 0.8
TNXB-204ENST00000479795 ZNF592Q92610 1267 aa20.05■□□□□ 0.8
TNXB-204ENST00000479795 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.05■□□□□ 0.8
TNXB-204ENST00000479795 OGFRQ9NZT2 677 aa20.05■□□□□ 0.8
TNXB-204ENST00000479795 COL14A1Q05707 1796 aaKnown RBP20.05■□□□□ 0.8
TNXB-204ENST00000479795 BTBD18B2RXH4 712 aa20.04■□□□□ 0.8
TNXB-204ENST00000479795 KCNQ2O43526 872 aa20.04■□□□□ 0.8
TNXB-204ENST00000479795 GYG1P46976 350 aa20.04■□□□□ 0.8
TNXB-204ENST00000479795 IRX5P78411 483 aaPredicted RBP20.04■□□□□ 0.8
TNXB-204ENST00000479795 MAPK8IP2Q13387 824 aaPredicted RBP20.04■□□□□ 0.8
TNXB-204ENST00000479795 NUP133Q8WUM0 1156 aa20.04■□□□□ 0.8
TNXB-204ENST00000479795 CYP7A1P22680 504 aa20.04■□□□□ 0.8
TNXB-204ENST00000479795 LIFRP42702 1097 aa20.04■□□□□ 0.8
TNXB-204ENST00000479795 NBPF11Q86T75 865 aa20.04■□□□□ 0.8
TNXB-204ENST00000479795 AK7Q96M32 723 aa20.04■□□□□ 0.8
TNXB-204ENST00000479795 MAP3K14Q99558 947 aa20.04■□□□□ 0.8
TNXB-204ENST00000479795 NACAP1Q9BZK3 213 aa20.04■□□□□ 0.8
TNXB-204ENST00000479795 TRMT1Q9NXH9 659 aaKnown RBP20.04■□□□□ 0.8
TNXB-204ENST00000479795 IFNKQ9P0W0 207 aa20.04■□□□□ 0.8
TNXB-204ENST00000479795 PNOCQ13519 176 aa20.04■□□□□ 0.8
TNXB-204ENST00000479795 C3orf67Q6ZVT6 689 aa20.04■□□□□ 0.8
TNXB-204ENST00000479795 XPO4Q9C0E2 1151 aaKnown RBP20.04■□□□□ 0.8
TNXB-204ENST00000479795 CTIFO43310 598 aaKnown RBP20.03■□□□□ 0.8
TNXB-204ENST00000479795 LMOD1P29536 600 aaPredicted RBP20.03■□□□□ 0.8
TNXB-204ENST00000479795 NLRP12P59046 1061 aa20.03■□□□□ 0.8
TNXB-204ENST00000479795 WTAPQ15007 396 aa20.03■□□□□ 0.8
TNXB-204ENST00000479795 BICDL1Q6ZP65 573 aa20.03■□□□□ 0.8
TNXB-204ENST00000479795 KRT23Q9C075 422 aa20.03■□□□□ 0.8
TNXB-204ENST00000479795 DNAJC5Q9H3Z4 198 aa20.03■□□□□ 0.8
TNXB-204ENST00000479795 ATP2B1P20020 1258 aa20.03■□□□□ 0.8
TNXB-204ENST00000479795 CNNM2Q9H8M5 875 aa20.03■□□□□ 0.8
TNXB-204ENST00000479795 RAI14Q9P0K7 980 aa20.03■□□□□ 0.8
TNXB-204ENST00000479795 COL4A1P02462 1669 aa20.02■□□□□ 0.8
TNXB-204ENST00000479795 LRP5O75197 1615 aa20.02■□□□□ 0.8
TNXB-204ENST00000479795 PARP10Q53GL7 1025 aa20.02■□□□□ 0.8
TNXB-204ENST00000479795 CCDC24Q8N4L8 307 aa20.02■□□□□ 0.8
TNXB-204ENST00000479795 RTN1Q16799 776 aa20.02■□□□□ 0.79
TNXB-204ENST00000479795 MYH14Q7Z406 1995 aaKnown RBP20.01■□□□□ 0.79
TNXB-204ENST00000479795 FMNL1O95466 1100 aaPredicted RBP20.01■□□□□ 0.79
TNXB-204ENST00000479795 CCZ1BP86790 482 aa20.01■□□□□ 0.79
TNXB-204ENST00000479795 CCZ1P86791 482 aaPredicted RBP20.01■□□□□ 0.79
TNXB-204ENST00000479795 SPATA31A1Q5TZJ5 1347 aa20.01■□□□□ 0.79
TNXB-204ENST00000479795 COL16A1Q07092 1604 aaPredicted RBP20.01■□□□□ 0.79
TNXB-204ENST00000479795 PPP6R2O75170 966 aa20.01■□□□□ 0.79
TNXB-204ENST00000479795 SLFN14P0C7P3 912 aa20.01■□□□□ 0.79
TNXB-204ENST00000479795 ATP1A3P13637 1013 aa20.01■□□□□ 0.79
TNXB-204ENST00000479795 GRIN1Q05586 938 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms