RNA–Protein interactions for RNA: ENST00000479782.1

RPP40-205, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5

Gene RPP40, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-205ENST00000479782 USP17L12C9JPN9 530 aa16.83■□□□□ 0.28
RPP40-205ENST00000479782 USP17L21D6R901 530 aa16.83■□□□□ 0.28
RPP40-205ENST00000479782 E7EWF7 191 aa16.83■□□□□ 0.28
RPP40-205ENST00000479782 MYO1BO43795 1136 aa16.83■□□□□ 0.28
RPP40-205ENST00000479782 HMGB1P09429 215 aaKnown RBP16.83■□□□□ 0.28
RPP40-205ENST00000479782 HAND2P61296 217 aa16.83■□□□□ 0.28
RPP40-205ENST00000479782 ADCK5Q3MIX3 580 aa16.83■□□□□ 0.28
RPP40-205ENST00000479782 DPY19L2Q6NUT2 758 aa16.83■□□□□ 0.28
RPP40-205ENST00000479782 MAPKAPK5Q8IW41 473 aa16.83■□□□□ 0.28
RPP40-205ENST00000479782 PRMT6Q96LA8 375 aaPredicted RBP16.83■□□□□ 0.28
RPP40-205ENST00000479782 JAKMIP1Q96N16 626 aaKnown RBP16.83■□□□□ 0.28
RPP40-205ENST00000479782 TMOD2Q9NZR1 351 aa16.83■□□□□ 0.28
RPP40-205ENST00000479782 CNOT7Q9UIV1 285 aaKnown RBP16.83■□□□□ 0.28
RPP40-205ENST00000479782 PCDHAC2Q9Y5I4 1007 aa16.83■□□□□ 0.28
RPP40-205ENST00000479782 COL2A1P02458 1487 aaPredicted RBP16.82■□□□□ 0.28
RPP40-205ENST00000479782 ROBO3Q96MS0 1386 aa16.82■□□□□ 0.28
RPP40-205ENST00000479782 MINDY4BA8MYZ0 360 aa16.82■□□□□ 0.28
RPP40-205ENST00000479782 H7C1D1 291 aa16.82■□□□□ 0.28
RPP40-205ENST00000479782 SLC3A2P08195 630 aaKnown RBP16.82■□□□□ 0.28
RPP40-205ENST00000479782 PCP11498 1178 aaKnown RBP16.82■□□□□ 0.28
RPP40-205ENST00000479782 CASTP20810 708 aaKnown RBP16.82■□□□□ 0.28
RPP40-205ENST00000479782 STAG1Q8WVM7 1258 aa16.82■□□□□ 0.28
RPP40-205ENST00000479782 NEK1Q96PY6 1258 aa16.82■□□□□ 0.28
RPP40-205ENST00000479782 NBPF3Q9H094 633 aa16.82■□□□□ 0.28
RPP40-205ENST00000479782 RNF41Q9H4P4 317 aaPredicted RBP16.82■□□□□ 0.28
RPP40-205ENST00000479782 TDRD3Q9H7E2 651 aaKnown RBP16.82■□□□□ 0.28
RPP40-205ENST00000479782 CNNM2Q9H8M5 875 aa16.82■□□□□ 0.28
RPP40-205ENST00000479782 ZSWIM6Q9HCJ5 1215 aa16.82■□□□□ 0.28
RPP40-205ENST00000479782 GPRC5DQ9NZD1 345 aa16.82■□□□□ 0.28
RPP40-205ENST00000479782 CYP46A1Q9Y6A2 500 aa16.82■□□□□ 0.28
RPP40-205ENST00000479782 TAF6LQ9Y6J9 622 aa16.82■□□□□ 0.28
RPP40-205ENST00000479782 DCAF8L1A6NGE4 600 aa16.81■□□□□ 0.28
RPP40-205ENST00000479782 WNT10BO00744 389 aa16.81■□□□□ 0.28
RPP40-205ENST00000479782 ST18O60284 1047 aa16.81■□□□□ 0.28
RPP40-205ENST00000479782 POLR3DP05423 398 aaPredicted RBP16.81■□□□□ 0.28
RPP40-205ENST00000479782 TRDNQ13061 729 aa16.81■□□□□ 0.28
RPP40-205ENST00000479782 PICALMQ13492 652 aa16.81■□□□□ 0.28
RPP40-205ENST00000479782 SPDYE2Q495Y8 402 aa16.81■□□□□ 0.28
RPP40-205ENST00000479782 AKNAD1Q5T1N1 836 aa16.81■□□□□ 0.28
RPP40-205ENST00000479782 C12orf60Q5U649 245 aa16.81■□□□□ 0.28
RPP40-205ENST00000479782 FKBP1CQ5VVH2 108 aa16.81■□□□□ 0.28
RPP40-205ENST00000479782 BLOC1S2Q6QNY1 142 aa16.81■□□□□ 0.28
RPP40-205ENST00000479782 STOX1Q6ZVD7 989 aa16.81■□□□□ 0.28
RPP40-205ENST00000479782 RUFY3Q7L099 469 aa16.81■□□□□ 0.28
RPP40-205ENST00000479782 TBC1D10CQ8IV04 446 aa16.81■□□□□ 0.28
RPP40-205ENST00000479782 NCOA7Q8NI08 942 aa16.81■□□□□ 0.28
RPP40-205ENST00000479782 OSBPL5Q9H0X9 879 aaPredicted RBP16.81■□□□□ 0.28
RPP40-205ENST00000479782 DDX4Q9NQI0 724 aaKnown RBP16.81■□□□□ 0.28
RPP40-205ENST00000479782 GOLGB1Q14789 3259 aaKnown RBP16.8■□□□□ 0.28
RPP40-205ENST00000479782 ENTPD3O75355 529 aa16.8■□□□□ 0.28
RPP40-205ENST00000479782 NT5C2P49902 561 aa16.8■□□□□ 0.28
RPP40-205ENST00000479782 NEK4P51957 841 aa16.8■□□□□ 0.28
RPP40-205ENST00000479782 CTDSPL2Q05D32 466 aa16.8■□□□□ 0.28
RPP40-205ENST00000479782 MFSD6Q6ZSS7 791 aa16.8■□□□□ 0.28
RPP40-205ENST00000479782 RALYLQ86SE5 291 aaKnown RBP16.8■□□□□ 0.28
RPP40-205ENST00000479782 TTC6Q86TZ1 520 aa16.8■□□□□ 0.28
RPP40-205ENST00000479782 DHX36Q9H2U1 1008 aaKnown RBP16.8■□□□□ 0.28
RPP40-205ENST00000479782 ZNF70Q9UC06 446 aaPredicted RBP16.8■□□□□ 0.28
RPP40-205ENST00000479782 TAOK2Q9UL54 1235 aa16.8■□□□□ 0.28
RPP40-205ENST00000479782 SHTN1A0MZ66 631 aa16.79■□□□□ 0.28
RPP40-205ENST00000479782 DDNO94850 711 aaPredicted RBP16.79■□□□□ 0.28
RPP40-205ENST00000479782 FGRP09769 529 aa16.79■□□□□ 0.28
RPP40-205ENST00000479782 RPS6KB1P23443 525 aa16.79■□□□□ 0.28
RPP40-205ENST00000479782 LMOD1P29536 600 aaPredicted RBP16.79■□□□□ 0.28
RPP40-205ENST00000479782 PDE4BQ07343 736 aa16.79■□□□□ 0.28
RPP40-205ENST00000479782 NFIAQ12857 509 aa16.79■□□□□ 0.28
RPP40-205ENST00000479782 KIF4BQ2VIQ3 1234 aa16.79■□□□□ 0.28
RPP40-205ENST00000479782 SNX21Q969T3 373 aa16.79■□□□□ 0.28
RPP40-205ENST00000479782 L3MBTL3Q96JM7 780 aaPredicted RBP16.79■□□□□ 0.28
RPP40-205ENST00000479782 UPF3BQ9BZI7 483 aaKnown RBP16.79■□□□□ 0.28
RPP40-205ENST00000479782 KRT23Q9C075 422 aa16.79■□□□□ 0.28
RPP40-205ENST00000479782 WDR19Q8NEZ3 1342 aa16.78■□□□□ 0.28
RPP40-205ENST00000479782 CYP2D7A0A087X1C5 515 aa16.78■□□□□ 0.28
RPP40-205ENST00000479782 HLA-DOAP06340 250 aa16.78■□□□□ 0.28
RPP40-205ENST00000479782 NBPF9Q3BBW0 867 aa16.78■□□□□ 0.28
RPP40-205ENST00000479782 ALDH8A1Q9H2A2 487 aaPredicted RBP16.78■□□□□ 0.28
RPP40-205ENST00000479782 ZNF287Q9HBT7 754 aa16.78■□□□□ 0.28
RPP40-205ENST00000479782 FAM198AQ9UFP1 575 aa16.78■□□□□ 0.28
RPP40-205ENST00000479782 SAP30BPQ9UHR5 308 aaKnown RBP16.78■□□□□ 0.28
RPP40-205ENST00000479782 ATRNL1Q5VV63 1379 aa16.77■□□□□ 0.28
RPP40-205ENST00000479782 NEDD4P46934 1319 aa16.77■□□□□ 0.28
RPP40-205ENST00000479782 CLRN2A0PK11 232 aa16.77■□□□□ 0.28
RPP40-205ENST00000479782 GLTPD2A6NH11 291 aa16.77■□□□□ 0.28
RPP40-205ENST00000479782 CYP2D6P10635 497 aa16.77■□□□□ 0.28
RPP40-205ENST00000479782 MCM5P33992 734 aa16.77■□□□□ 0.28
RPP40-205ENST00000479782 MCM2P49736 904 aa16.77■□□□□ 0.28
RPP40-205ENST00000479782 CACNB3P54284 484 aa16.77■□□□□ 0.28
RPP40-205ENST00000479782 TNFAIP1Q13829 316 aa16.77■□□□□ 0.28
RPP40-205ENST00000479782 BECN1Q14457 450 aa16.77■□□□□ 0.28
RPP40-205ENST00000479782 DHX32Q7L7V1 743 aaKnown RBP16.77■□□□□ 0.28
RPP40-205ENST00000479782 SAMD7Q7Z3H4 446 aa16.77■□□□□ 0.28
RPP40-205ENST00000479782 FAM83AQ86UY5 434 aa16.77■□□□□ 0.28
RPP40-205ENST00000479782 MB21D2Q8IYB1 491 aaPredicted RBP16.77■□□□□ 0.28
RPP40-205ENST00000479782 TTC14Q96N46 770 aa16.77■□□□□ 0.28
RPP40-205ENST00000479782 EHD4Q9H223 541 aa16.77■□□□□ 0.28
RPP40-205ENST00000479782 PDRG1Q9NUG6 133 aa16.77■□□□□ 0.28
RPP40-205ENST00000479782 SCN4AP35499 1836 aa16.76■□□□□ 0.27
RPP40-205ENST00000479782 ORC4O43929 436 aa16.76■□□□□ 0.27
RPP40-205ENST00000479782 EPS15P42566 896 aa16.76■□□□□ 0.27
RPP40-205ENST00000479782 TNNI2P48788 182 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms