RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 MYL6BP14649 208 aa7.85□□□□□ -1.15
SF3B1-209ENST00000479532 COL8A1P27658 744 aa7.85□□□□□ -1.15
SF3B1-209ENST00000479532 PTK7Q13308 1070 aa7.85□□□□□ -1.15
SF3B1-209ENST00000479532 DBN1Q16643 649 aa7.85□□□□□ -1.15
SF3B1-209ENST00000479532 ZNF827Q17R98 1081 aa7.85□□□□□ -1.15
SF3B1-209ENST00000479532 KRT24Q2M2I5 525 aa7.85□□□□□ -1.15
SF3B1-209ENST00000479532 OXLD1Q5BKU9 147 aa7.85□□□□□ -1.15
SF3B1-209ENST00000479532 INTS5Q6P9B9 1019 aaKnown RBP7.85□□□□□ -1.15
SF3B1-209ENST00000479532 KIF6Q6ZMV9 814 aa7.85□□□□□ -1.15
SF3B1-209ENST00000479532 TRMT2AQ8IZ69 625 aaKnown RBP7.85□□□□□ -1.15
SF3B1-209ENST00000479532 DDX21Q9NR30 783 aaKnown RBP eCLIP7.85□□□□□ -1.15
SF3B1-209ENST00000479532 HYPKQ9NX55 129 aa7.85□□□□□ -1.15
SF3B1-209ENST00000479532 C4AP0C0L4 1744 aa7.84□□□□□ -1.15
SF3B1-209ENST00000479532 VAMP4O75379 141 aa7.84□□□□□ -1.15
SF3B1-209ENST00000479532 DDX58O95786 925 aaKnown RBP7.84□□□□□ -1.15
SF3B1-209ENST00000479532 RHOQP17081 205 aa7.84□□□□□ -1.15
SF3B1-209ENST00000479532 KCNA1Q09470 495 aa7.84□□□□□ -1.15
SF3B1-209ENST00000479532 R3HDM1Q15032 1099 aaKnown RBP7.84□□□□□ -1.15
SF3B1-209ENST00000479532 RNF20Q5VTR2 975 aa7.84□□□□□ -1.15
SF3B1-209ENST00000479532 TSPYL6Q8N831 410 aa7.84□□□□□ -1.15
SF3B1-209ENST00000479532 CHPF2Q9P2E5 772 aa7.84□□□□□ -1.15
SF3B1-209ENST00000479532 NOD1Q9Y239 953 aa7.84□□□□□ -1.15
SF3B1-209ENST00000479532 ZNF652Q9Y2D9 606 aa7.84□□□□□ -1.15
SF3B1-209ENST00000479532 PNPLA7Q6ZV29 1317 aa7.83□□□□□ -1.16
SF3B1-209ENST00000479532 PATL2C9JE40 543 aaKnown RBP7.83□□□□□ -1.16
SF3B1-209ENST00000479532 PIP4K2AP48426 406 aaPredicted RBP7.83□□□□□ -1.16
SF3B1-209ENST00000479532 EIF5P55010 431 aaKnown RBP7.83□□□□□ -1.16
SF3B1-209ENST00000479532 ALDH1L2Q3SY69 923 aa7.83□□□□□ -1.16
SF3B1-209ENST00000479532 TRIM50Q86XT4 487 aa7.83□□□□□ -1.16
SF3B1-209ENST00000479532 OGFOD1Q8N543 542 aa7.83□□□□□ -1.16
SF3B1-209ENST00000479532 ZNF594Q96JF6 807 aaPredicted RBP7.83□□□□□ -1.16
SF3B1-209ENST00000479532 OXCT2Q9BYC2 517 aaPredicted RBP7.83□□□□□ -1.16
SF3B1-209ENST00000479532 GZF1Q9H116 711 aaPredicted RBP7.83□□□□□ -1.16
SF3B1-209ENST00000479532 CDV3Q9UKY7 258 aaKnown RBP7.83□□□□□ -1.16
SF3B1-209ENST00000479532 SCN7AQ01118 1682 aa7.83□□□□□ -1.16
SF3B1-209ENST00000479532 BCORQ6W2J9 1755 aa7.82□□□□□ -1.16
SF3B1-209ENST00000479532 ESPNB1AK53 854 aa7.82□□□□□ -1.16
SF3B1-209ENST00000479532 RAB15P59190 212 aa7.82□□□□□ -1.16
SF3B1-209ENST00000479532 CLDN10P78369 228 aa7.82□□□□□ -1.16
SF3B1-209ENST00000479532 AIMP1Q12904 312 aaKnown RBP7.82□□□□□ -1.16
SF3B1-209ENST00000479532 DOC2BQ14184 412 aa7.82□□□□□ -1.16
SF3B1-209ENST00000479532 HSP90AB3PQ58FF7 597 aa7.82□□□□□ -1.16
SF3B1-209ENST00000479532 FOXD4L5Q5VV16 416 aaPredicted RBP7.82□□□□□ -1.16
SF3B1-209ENST00000479532 NBPF10Q6P3W6 841 aaKnown RBP7.82□□□□□ -1.16
SF3B1-209ENST00000479532 COL23A1Q86Y22 540 aaPredicted RBP7.82□□□□□ -1.16
SF3B1-209ENST00000479532 ANKMY2Q8IV38 441 aa7.82□□□□□ -1.16
SF3B1-209ENST00000479532 NBPF15Q8N660 670 aa7.82□□□□□ -1.16
SF3B1-209ENST00000479532 SMC4Q9NTJ3 1288 aa7.82□□□□□ -1.16
SF3B1-209ENST00000479532 NARFQ9UHQ1 456 aa7.82□□□□□ -1.16
SF3B1-209ENST00000479532 PCDHB11Q9Y5F2 797 aa7.82□□□□□ -1.16
SF3B1-209ENST00000479532 CASZ1Q86V15 1759 aa7.82□□□□□ -1.16
SF3B1-209ENST00000479532 MAP3K15Q6ZN16 1313 aa7.81□□□□□ -1.16
SF3B1-209ENST00000479532 KIF16BQ96L93 1317 aa7.81□□□□□ -1.16
SF3B1-209ENST00000479532 USP42Q9H9J4 1324 aaKnown RBP7.81□□□□□ -1.16
SF3B1-209ENST00000479532 ERVV-1B6SEH8 477 aa7.81□□□□□ -1.16
SF3B1-209ENST00000479532 PIK3R2O00459 728 aa7.81□□□□□ -1.16
SF3B1-209ENST00000479532 POLD1P28340 1107 aa7.81□□□□□ -1.16
SF3B1-209ENST00000479532 ATP1A2P50993 1020 aa7.81□□□□□ -1.16
SF3B1-209ENST00000479532 DPYDQ12882 1025 aa7.81□□□□□ -1.16
SF3B1-209ENST00000479532 FKBP5Q13451 457 aaPredicted RBP7.81□□□□□ -1.16
SF3B1-209ENST00000479532 USPL1Q5W0Q7 1092 aa7.81□□□□□ -1.16
SF3B1-209ENST00000479532 COPS6Q7L5N1 327 aa7.81□□□□□ -1.16
SF3B1-209ENST00000479532 NBPF11Q86T75 865 aa7.81□□□□□ -1.16
SF3B1-209ENST00000479532 NLGN1Q8N2Q7 840 aa7.81□□□□□ -1.16
SF3B1-209ENST00000479532 FAM200AQ8TCP9 573 aa7.81□□□□□ -1.16
SF3B1-209ENST00000479532 XAGE3Q8WTP9 111 aa7.81□□□□□ -1.16
SF3B1-209ENST00000479532 MTFR1LQ9H019 292 aa7.81□□□□□ -1.16
SF3B1-209ENST00000479532 DNAAF2Q9NVR5 837 aaKnown RBP7.81□□□□□ -1.16
SF3B1-209ENST00000479532 NUP98P52948 1817 aa7.8□□□□□ -1.16
SF3B1-209ENST00000479532 ANKRD36CQ5JPF3 1778 aa7.8□□□□□ -1.16
SF3B1-209ENST00000479532 ARFGEF2Q9Y6D5 1785 aa7.8□□□□□ -1.16
SF3B1-209ENST00000479532 KRTAP4-8A0A0G2JLE6 195 aa7.8□□□□□ -1.16
SF3B1-209ENST00000479532 TCERG1O14776 1098 aaKnown RBP7.8□□□□□ -1.16
SF3B1-209ENST00000479532 NPHP1O15259 732 aa7.8□□□□□ -1.16
SF3B1-209ENST00000479532 IPO8O15397 1037 aaKnown RBP7.8□□□□□ -1.16
SF3B1-209ENST00000479532 ANXA1P04083 346 aa7.8□□□□□ -1.16
SF3B1-209ENST00000479532 AMPD1P23109 780 aa7.8□□□□□ -1.16
SF3B1-209ENST00000479532 ITGB7P26010 798 aa7.8□□□□□ -1.16
SF3B1-209ENST00000479532 MAP2K3P46734 347 aa7.8□□□□□ -1.16
SF3B1-209ENST00000479532 GTF2IP78347 998 aa7.8□□□□□ -1.16
SF3B1-209ENST00000479532 NEXNQ0ZGT2 675 aa7.8□□□□□ -1.16
SF3B1-209ENST00000479532 PROSER3Q2NL68 480 aa7.8□□□□□ -1.16
SF3B1-209ENST00000479532 B4GALNT3Q6L9W6 998 aa7.8□□□□□ -1.16
SF3B1-209ENST00000479532 CLEC4GQ6UXB4 293 aa7.8□□□□□ -1.16
SF3B1-209ENST00000479532 CD163Q86VB7 1156 aa7.8□□□□□ -1.16
SF3B1-209ENST00000479532 PLBD2Q8NHP8 589 aa7.8□□□□□ -1.16
SF3B1-209ENST00000479532 GAS2L1Q99501 681 aaPredicted RBP7.8□□□□□ -1.16
SF3B1-209ENST00000479532 KIAA1024Q9UPX6 916 aa7.8□□□□□ -1.16
SF3B1-209ENST00000479532 PTPRCP08575 1304 aa7.79□□□□□ -1.16
SF3B1-209ENST00000479532 CAMTA2O94983 1202 aa7.79□□□□□ -1.16
SF3B1-209ENST00000479532 GYS1P13807 737 aa7.79□□□□□ -1.16
SF3B1-209ENST00000479532 PTGIRP43119 386 aa7.79□□□□□ -1.16
SF3B1-209ENST00000479532 RARSP54136 660 aaKnown RBP7.79□□□□□ -1.16
SF3B1-209ENST00000479532 TTLL7Q6ZT98 887 aa7.79□□□□□ -1.16
SF3B1-209ENST00000479532 SMIM5Q71RC9 77 aa7.79□□□□□ -1.16
SF3B1-209ENST00000479532 AMIGO3Q86WK7 504 aa7.79□□□□□ -1.16
SF3B1-209ENST00000479532 LARGE2Q8N3Y3 721 aa7.79□□□□□ -1.16
SF3B1-209ENST00000479532 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.79□□□□□ -1.16
SF3B1-209ENST00000479532 SSH1Q8WYL5 1049 aa7.79□□□□□ -1.16
SF3B1-209ENST00000479532 SETDB2Q96T68 719 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms