RNA–Protein interactions for RNA: ENST00000479529.2

CCDC17-205, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 2,038 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-205ENST00000479529 HMGB1P09429 215 aaKnown RBP22.35■■□□□ 1.17
CCDC17-205ENST00000479529 USP17L8P0C7I0 530 aa22.35■■□□□ 1.17
CCDC17-205ENST00000479529 CYP2D6P10635 497 aa22.35■■□□□ 1.17
CCDC17-205ENST00000479529 CRKP46108 304 aa22.35■■□□□ 1.17
CCDC17-205ENST00000479529 EXOSC10Q01780 885 aaKnown RBP22.35■■□□□ 1.17
CCDC17-205ENST00000479529 Q6ZUG5 572 aa22.35■■□□□ 1.17
CCDC17-205ENST00000479529 MAPKAPK5Q8IW41 473 aa22.35■■□□□ 1.17
CCDC17-205ENST00000479529 MCM9Q9NXL9 1143 aa22.35■■□□□ 1.17
CCDC17-205ENST00000479529 GIMAP6Q6P9H5 292 aa22.35■■□□□ 1.17
CCDC17-205ENST00000479529 MB21D2Q8IYB1 491 aaPredicted RBP22.35■■□□□ 1.17
CCDC17-205ENST00000479529 TEX11Q8IYF3 940 aa22.35■■□□□ 1.17
CCDC17-205ENST00000479529 NCOA7Q8NI08 942 aa22.35■■□□□ 1.17
CCDC17-205ENST00000479529 B4E1Z4 1266 aa22.34■■□□□ 1.17
CCDC17-205ENST00000479529 AKNAD1Q5T1N1 836 aa22.34■■□□□ 1.17
CCDC17-205ENST00000479529 APOBEC3HQ6NTF7 200 aaKnown RBP22.34■■□□□ 1.17
CCDC17-205ENST00000479529 RALYLQ86SE5 291 aaKnown RBP22.34■■□□□ 1.17
CCDC17-205ENST00000479529 TPCN1Q9ULQ1 816 aa22.34■■□□□ 1.17
CCDC17-205ENST00000479529 LIMCH1Q9UPQ0 1083 aa22.34■■□□□ 1.17
CCDC17-205ENST00000479529 TIAM2Q8IVF5 1701 aa22.34■■□□□ 1.17
CCDC17-205ENST00000479529 CXCL9Q07325 125 aa22.33■■□□□ 1.17
CCDC17-205ENST00000479529 RSBN1LQ6PCB5 846 aaPredicted RBP22.33■■□□□ 1.17
CCDC17-205ENST00000479529 HHIPL2Q6UWX4 724 aa22.33■■□□□ 1.17
CCDC17-205ENST00000479529 JDP2Q8WYK2 163 aa22.33■■□□□ 1.17
CCDC17-205ENST00000479529 GPHNQ9NQX3 736 aaPredicted RBP22.33■■□□□ 1.17
CCDC17-205ENST00000479529 VIL1P09327 827 aaKnown RBP22.33■■□□□ 1.16
CCDC17-205ENST00000479529 RBM5P52756 815 aaKnown RBP eCLIP22.33■■□□□ 1.16
CCDC17-205ENST00000479529 ANTXR2P58335 489 aa22.33■■□□□ 1.16
CCDC17-205ENST00000479529 TRDNQ13061 729 aa22.33■■□□□ 1.16
CCDC17-205ENST00000479529 SAP30BPQ9UHR5 308 aaKnown RBP22.33■■□□□ 1.16
CCDC17-205ENST00000479529 RRP12Q5JTH9 1297 aaKnown RBP22.32■■□□□ 1.16
CCDC17-205ENST00000479529 MFSD6Q6ZSS7 791 aa22.32■■□□□ 1.16
CCDC17-205ENST00000479529 CYB5R4Q7L1T6 521 aa22.32■■□□□ 1.16
CCDC17-205ENST00000479529 STAG1Q8WVM7 1258 aa22.32■■□□□ 1.16
CCDC17-205ENST00000479529 BRF1Q92994 677 aa22.32■■□□□ 1.16
CCDC17-205ENST00000479529 TOMM22Q9NS69 142 aa22.32■■□□□ 1.16
CCDC17-205ENST00000479529 NAV1Q8NEY1 1877 aa22.32■■□□□ 1.16
CCDC17-205ENST00000479529 FLT1P17948 1338 aa22.31■■□□□ 1.16
CCDC17-205ENST00000479529 LTBP3Q9NS15 1303 aa22.31■■□□□ 1.16
CCDC17-205ENST00000479529 PRC1O43663 620 aa22.31■■□□□ 1.16
CCDC17-205ENST00000479529 PLCG2P16885 1265 aa22.31■■□□□ 1.16
CCDC17-205ENST00000479529 FGD1P98174 961 aa22.31■■□□□ 1.16
CCDC17-205ENST00000479529 ME3Q16798 604 aa22.31■■□□□ 1.16
CCDC17-205ENST00000479529 ANAPC4Q9UJX5 808 aa22.31■■□□□ 1.16
CCDC17-205ENST00000479529 LAMB1P07942 1786 aa22.31■■□□□ 1.16
CCDC17-205ENST00000479529 DTNBO60941 627 aa22.31■■□□□ 1.16
CCDC17-205ENST00000479529 PICALMQ13492 652 aa22.31■■□□□ 1.16
CCDC17-205ENST00000479529 CDC42EP5Q6NZY7 148 aa22.31■■□□□ 1.16
CCDC17-205ENST00000479529 CERS3Q8IU89 383 aa22.31■■□□□ 1.16
CCDC17-205ENST00000479529 ZDHHC15Q96MV8 337 aa22.31■■□□□ 1.16
CCDC17-205ENST00000479529 ALDH8A1Q9H2A2 487 aaPredicted RBP22.31■■□□□ 1.16
CCDC17-205ENST00000479529 USP40Q9NVE5 1235 aa22.31■■□□□ 1.16
CCDC17-205ENST00000479529 ARPP21Q9UBL0 812 aaPredicted RBP22.31■■□□□ 1.16
CCDC17-205ENST00000479529 KDM4AO75164 1064 aa22.3■■□□□ 1.16
CCDC17-205ENST00000479529 PRDM1O75626 825 aa22.3■■□□□ 1.16
CCDC17-205ENST00000479529 MCM5P33992 734 aa22.3■■□□□ 1.16
CCDC17-205ENST00000479529 ARHGAP27Q6ZUM4 889 aa22.3■■□□□ 1.16
CCDC17-205ENST00000479529 GMLQ99445 158 aa22.3■■□□□ 1.16
CCDC17-205ENST00000479529 WDHD1O75717 1129 aaPredicted RBP22.3■■□□□ 1.16
CCDC17-205ENST00000479529 CACNB3P54284 484 aa22.3■■□□□ 1.16
CCDC17-205ENST00000479529 DDX4Q9NQI0 724 aaKnown RBP22.3■■□□□ 1.16
CCDC17-205ENST00000479529 ANKRD1Q15327 319 aa22.29■■□□□ 1.16
CCDC17-205ENST00000479529 NECAB1Q8N987 351 aa22.29■■□□□ 1.16
CCDC17-205ENST00000479529 ZSWIM5Q9P217 1185 aa22.29■■□□□ 1.16
CCDC17-205ENST00000479529 SERPINA10Q9UK55 444 aa22.29■■□□□ 1.16
CCDC17-205ENST00000479529 FOCADQ5VW36 1801 aa22.28■■□□□ 1.16
CCDC17-205ENST00000479529 PLCD1P51178 756 aa22.28■■□□□ 1.16
CCDC17-205ENST00000479529 STK3Q13188 491 aa22.28■■□□□ 1.16
CCDC17-205ENST00000479529 CUL4AQ13619 759 aa22.28■■□□□ 1.16
CCDC17-205ENST00000479529 SBK1Q52WX2 424 aa22.28■■□□□ 1.16
CCDC17-205ENST00000479529 MYO3BQ8WXR4 1341 aa22.28■■□□□ 1.16
CCDC17-205ENST00000479529 DDX60LQ5H9U9 1706 aaKnown RBP22.28■■□□□ 1.16
CCDC17-205ENST00000479529 HDLBPQ00341 1268 aaKnown RBP22.28■■□□□ 1.16
CCDC17-205ENST00000479529 APOBRQ0VD83 1088 aa22.28■■□□□ 1.16
CCDC17-205ENST00000479529 ST3GAL1Q11201 340 aa22.28■■□□□ 1.16
CCDC17-205ENST00000479529 NFIAQ12857 509 aa22.28■■□□□ 1.16
CCDC17-205ENST00000479529 CFAP100Q494V2 611 aa22.28■■□□□ 1.16
CCDC17-205ENST00000479529 C12orf60Q5U649 245 aa22.28■■□□□ 1.16
CCDC17-205ENST00000479529 CIAPIN1Q6FI81 312 aa22.28■■□□□ 1.16
CCDC17-205ENST00000479529 DYNLL2Q96FJ2 89 aa22.28■■□□□ 1.16
CCDC17-205ENST00000479529 MRIQ9BWK5 157 aa22.28■■□□□ 1.16
CCDC17-205ENST00000479529 AGXT2Q9BYV1 514 aa22.27■■□□□ 1.16
CCDC17-205ENST00000479529 RNF41Q9H4P4 317 aaPredicted RBP22.27■■□□□ 1.16
CCDC17-205ENST00000479529 CNNM2Q9H8M5 875 aa22.27■■□□□ 1.16
CCDC17-205ENST00000479529 ECM29Q5VYK3 1845 aa22.27■■□□□ 1.16
CCDC17-205ENST00000479529 MYH1P12882 1939 aa22.27■■□□□ 1.15
CCDC17-205ENST00000479529 YBX3P16989 372 aaKnown RBP eCLIP22.26■■□□□ 1.15
CCDC17-205ENST00000479529 CCDC83Q8IWF9 413 aa22.26■■□□□ 1.15
CCDC17-205ENST00000479529 ZKSCAN3Q9BRR0 538 aa22.26■■□□□ 1.15
CCDC17-205ENST00000479529 KRT23Q9C075 422 aa22.26■■□□□ 1.15
CCDC17-205ENST00000479529 SHTN1A0MZ66 631 aa22.26■■□□□ 1.15
CCDC17-205ENST00000479529 POLR3DP05423 398 aaPredicted RBP22.26■■□□□ 1.15
CCDC17-205ENST00000479529 DDIT3P35638 169 aa22.26■■□□□ 1.15
CCDC17-205ENST00000479529 L1TD1Q5T7N2 865 aaKnown RBP22.26■■□□□ 1.15
CCDC17-205ENST00000479529 PRMT6Q96LA8 375 aaPredicted RBP22.26■■□□□ 1.15
CCDC17-205ENST00000479529 SENP2Q9HC62 589 aa22.26■■□□□ 1.15
CCDC17-205ENST00000479529 SLC44A5Q8NCS7 719 aa22.25■■□□□ 1.15
CCDC17-205ENST00000479529 TDRD3Q9H7E2 651 aaKnown RBP22.25■■□□□ 1.15
CCDC17-205ENST00000479529 OGFOD1Q8N543 542 aa22.24■■□□□ 1.15
CCDC17-205ENST00000479529 ZSCAN31Q96LW9 406 aaPredicted RBP22.24■■□□□ 1.15
CCDC17-205ENST00000479529 SH2B1Q9NRF2 756 aaPredicted RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms