RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 TRDNQ13061 729 aa15.16■□□□□ 0.02
CNKSR3-204ENST00000479339 TCIRG1Q13488 830 aa15.16■□□□□ 0.02
CNKSR3-204ENST00000479339 SLC10A5Q5PT55 438 aa15.16■□□□□ 0.02
CNKSR3-204ENST00000479339 CCDC83Q8IWF9 413 aa15.16■□□□□ 0.02
CNKSR3-204ENST00000479339 C8orf58Q8NAV2 365 aa15.16■□□□□ 0.02
CNKSR3-204ENST00000479339 UTP14AQ9BVJ6 771 aaKnown RBP15.16■□□□□ 0.02
CNKSR3-204ENST00000479339 HYPKQ9NX55 129 aa15.16■□□□□ 0.02
CNKSR3-204ENST00000479339 BRD3Q15059 726 aa15.16■□□□□ 0.02
CNKSR3-204ENST00000479339 HOMER1Q86YM7 354 aa15.16■□□□□ 0.02
CNKSR3-204ENST00000479339 ANKRD20A12PQ8NF67 263 aa15.16■□□□□ 0.02
CNKSR3-204ENST00000479339 LEO1Q8WVC0 666 aaPredicted RBP15.16■□□□□ 0.02
CNKSR3-204ENST00000479339 TM6SF1Q9BZW5 370 aa15.16■□□□□ 0.02
CNKSR3-204ENST00000479339 CCDC151A5D8V7 595 aa15.15■□□□□ 0.02
CNKSR3-204ENST00000479339 MAP2K7O14733 419 aa15.15■□□□□ 0.02
CNKSR3-204ENST00000479339 EIF3JO75822 258 aaKnown RBP15.15■□□□□ 0.02
CNKSR3-204ENST00000479339 TOMM70O94826 608 aa15.15■□□□□ 0.02
CNKSR3-204ENST00000479339 SFPQP23246 707 aaKnown RBP eCLIP15.15■□□□□ 0.02
CNKSR3-204ENST00000479339 LARP1BQ659C4 914 aaKnown RBP15.15■□□□□ 0.02
CNKSR3-204ENST00000479339 NLRP10Q86W26 655 aa15.15■□□□□ 0.02
CNKSR3-204ENST00000479339 PLBD2Q8NHP8 589 aa15.15■□□□□ 0.02
CNKSR3-204ENST00000479339 BICD2Q8TD16 824 aa15.15■□□□□ 0.02
CNKSR3-204ENST00000479339 RABGGTAQ92696 567 aa15.15■□□□□ 0.02
CNKSR3-204ENST00000479339 MEIS3Q99687 375 aa15.15■□□□□ 0.02
CNKSR3-204ENST00000479339 NAT10Q9H0A0 1025 aaKnown RBP15.15■□□□□ 0.02
CNKSR3-204ENST00000479339 ANO10Q9NW15 660 aa15.15■□□□□ 0.02
CNKSR3-204ENST00000479339 CHMP3Q9Y3E7 222 aa15.15■□□□□ 0.02
CNKSR3-204ENST00000479339 GLTPD2A6NH11 291 aa15.14■□□□□ 0.01
CNKSR3-204ENST00000479339 ELL2O00472 640 aaPredicted RBP15.14■□□□□ 0.01
CNKSR3-204ENST00000479339 SGSM2O43147 1006 aa15.14■□□□□ 0.01
CNKSR3-204ENST00000479339 MAP2K2P36507 400 aa15.14■□□□□ 0.01
CNKSR3-204ENST00000479339 FCHSD1Q86WN1 690 aa15.14■□□□□ 0.01
CNKSR3-204ENST00000479339 MPHOSPH8Q99549 860 aa15.14■□□□□ 0.01
CNKSR3-204ENST00000479339 A0A087WUV0 522 aaPredicted RBP15.14■□□□□ 0.01
CNKSR3-204ENST00000479339 PRR29P0C7W0 189 aa15.14■□□□□ 0.01
CNKSR3-204ENST00000479339 CEP57L1Q8IYX8 460 aa15.14■□□□□ 0.01
CNKSR3-204ENST00000479339 RTKN2Q8IZC4 609 aa15.14■□□□□ 0.01
CNKSR3-204ENST00000479339 RPGRQ92834 1020 aaKnown RBP15.14■□□□□ 0.01
CNKSR3-204ENST00000479339 CCDC34Q96HJ3 373 aa15.14■□□□□ 0.01
CNKSR3-204ENST00000479339 CRAMP1Q96RY5 1269 aa15.14■□□□□ 0.01
CNKSR3-204ENST00000479339 TIAM2Q8IVF5 1701 aa15.13■□□□□ 0.01
CNKSR3-204ENST00000479339 ANKRD36CQ5JPF3 1778 aa15.13■□□□□ 0.01
CNKSR3-204ENST00000479339 NR1I2O75469 434 aa15.13■□□□□ 0.01
CNKSR3-204ENST00000479339 FKBP4Q02790 459 aaKnown RBP eCLIP15.13■□□□□ 0.01
CNKSR3-204ENST00000479339 ANKRD13DQ6ZTN6 518 aa15.13■□□□□ 0.01
CNKSR3-204ENST00000479339 RBM46Q8TBY0 533 aaKnown RBP15.13■□□□□ 0.01
CNKSR3-204ENST00000479339 HNRNPLLQ8WVV9 542 aaKnown RBP15.13■□□□□ 0.01
CNKSR3-204ENST00000479339 RBM17Q96I25 401 aaKnown RBP15.13■□□□□ 0.01
CNKSR3-204ENST00000479339 CARD6Q9BX69 1037 aa15.13■□□□□ 0.01
CNKSR3-204ENST00000479339 RRAGCQ9HB90 399 aa15.13■□□□□ 0.01
CNKSR3-204ENST00000479339 CACNA1SQ13698 1873 aa15.13■□□□□ 0.01
CNKSR3-204ENST00000479339 POTEB2H3BUK9 544 aa15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 SRGAP3O43295 1099 aa15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 SART3Q15020 963 aaKnown RBP15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 GORABQ5T7V8 394 aa15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 CC2D2BQ6DHV5 1058 aa15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 C11orf57Q6ZUT1 292 aaPredicted RBP15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 C3orf67Q6ZVT6 689 aa15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 TADA2BQ86TJ2 420 aa15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 DHX40Q8IX18 779 aaKnown RBP15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 DHX37Q8IY37 1157 aaKnown RBP15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 NLRP3Q96P20 1036 aa15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 ISCA1Q9BUE6 129 aa15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 LSG1Q9H089 658 aaKnown RBP15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 PDRG1Q9NUG6 133 aa15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 SUFUQ9UMX1 484 aa15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 SNED1Q8TER0 1413 aa15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 GOLGA6L9A6NEM1 432 aa15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 URI1O94763 535 aaPredicted RBP15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 LARGE1O95461 756 aa15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 GNAI3P08754 354 aa15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 HSPA6P17066 643 aa15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 CCT4P50991 539 aaKnown RBP15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 RSRC2Q7L4I2 434 aaKnown RBP15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 KCNG1Q9UIX4 513 aa15.12■□□□□ 0.01
CNKSR3-204ENST00000479339 DICER1Q9UPY3 1922 aaKnown RBP15.11■□□□□ 0.01
CNKSR3-204ENST00000479339 H3BQF6 201 aa15.11■□□□□ 0.01
CNKSR3-204ENST00000479339 TDO2P48775 406 aa15.11■□□□□ 0.01
CNKSR3-204ENST00000479339 TUBB4BP68371 445 aa15.11■□□□□ 0.01
CNKSR3-204ENST00000479339 LONRF2Q1L5Z9 754 aa15.11■□□□□ 0.01
CNKSR3-204ENST00000479339 OLFM4Q6UX06 510 aa15.11■□□□□ 0.01
CNKSR3-204ENST00000479339 CYP46A1Q9Y6A2 500 aa15.11■□□□□ 0.01
CNKSR3-204ENST00000479339 CCDC88AQ3V6T2 1871 aa15.11■□□□□ 0.01
CNKSR3-204ENST00000479339 APOBRQ0VD83 1088 aa15.1■□□□□ 0.01
CNKSR3-204ENST00000479339 TRIM28Q13263 835 aaKnown RBP15.1■□□□□ 0.01
CNKSR3-204ENST00000479339 GRIPAP1Q4V328 841 aa15.1■□□□□ 0.01
CNKSR3-204ENST00000479339 DPY19L2Q6NUT2 758 aa15.1■□□□□ 0.01
CNKSR3-204ENST00000479339 CDC37L1Q7L3B6 337 aa15.1■□□□□ 0.01
CNKSR3-204ENST00000479339 NBPF11Q86T75 865 aa15.1■□□□□ 0.01
CNKSR3-204ENST00000479339 ERC1Q8IUD2 1116 aa15.1■□□□□ 0.01
CNKSR3-204ENST00000479339 GOLGA1Q92805 767 aa15.1■□□□□ 0.01
CNKSR3-204ENST00000479339 TRMT112Q9UI30 125 aaKnown RBP15.1■□□□□ 0.01
CNKSR3-204ENST00000479339 ZSCAN12O43309 604 aa15.1■□□□□ 0.01
CNKSR3-204ENST00000479339 GNAI2P04899 355 aa15.1■□□□□ 0.01
CNKSR3-204ENST00000479339 CALRP27797 417 aaKnown RBP15.1■□□□□ 0.01
CNKSR3-204ENST00000479339 CCDC30Q5VVM6 783 aa15.1■□□□□ 0.01
CNKSR3-204ENST00000479339 TRIM65Q6PJ69 517 aa15.1■□□□□ 0.01
CNKSR3-204ENST00000479339 HDXQ7Z353 690 aa15.1■□□□□ 0.01
CNKSR3-204ENST00000479339 CNPY4Q8N129 248 aa15.1■□□□□ 0.01
CNKSR3-204ENST00000479339 DNAAF4Q8WXU2 420 aa15.1■□□□□ 0.01
CNKSR3-204ENST00000479339 PSMD1Q99460 953 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms