RNA–Protein interactions for RNA: ENST00000479215.1

ITCH-204, Transcript of itchy E3 ubiquitin protein ligase, human

TSL 3

Gene ITCH, Length 205 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITCH-204	ENST00000479215	FAM110C	Q1W6H9	321 aa		11.17	□□□□□ -0.62
ITCH-204	ENST00000479215	CDC42EP5	Q6NZY7	148 aa		11.17	□□□□□ -0.62
ITCH-204	ENST00000479215	SLC4A10	Q6U841	1118 aa		11.17	□□□□□ -0.62
ITCH-204	ENST00000479215	SLF2	Q8IX21	1173 aa		11.17	□□□□□ -0.62
ITCH-204	ENST00000479215	UBE2O	Q9C0C9	1292 aa	Known RBP	11.17	□□□□□ -0.62
ITCH-204	ENST00000479215	C11orf49	Q9H6J7	331 aa		11.17	□□□□□ -0.62
ITCH-204	ENST00000479215	USP40	Q9NVE5	1235 aa		11.17	□□□□□ -0.62
ITCH-204	ENST00000479215	AFG3L2	Q9Y4W6	797 aa		11.17	□□□□□ -0.62
ITCH-204	ENST00000479215	ENTPD3	O75355	529 aa		11.16	□□□□□ -0.62
ITCH-204	ENST00000479215	LDHB	P07195	334 aa	Known RBP	11.16	□□□□□ -0.62
ITCH-204	ENST00000479215	WDR63	Q8IWG1	891 aa		11.16	□□□□□ -0.62
ITCH-204	ENST00000479215	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.16	□□□□□ -0.62
ITCH-204	ENST00000479215	ANKRD13C	Q8N6S4	541 aa		11.16	□□□□□ -0.62
ITCH-204	ENST00000479215	LPIN2	Q92539	896 aa		11.16	□□□□□ -0.62
ITCH-204	ENST00000479215	TBC1D2	Q9BYX2	928 aa		11.16	□□□□□ -0.62
ITCH-204	ENST00000479215	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	11.16	□□□□□ -0.62
ITCH-204	ENST00000479215	AGTPBP1	Q9UPW5	1226 aa		11.16	□□□□□ -0.62
ITCH-204	ENST00000479215		A0A0C4DFX4	3053 aa		11.16	□□□□□ -0.62
ITCH-204	ENST00000479215	FANCI	Q9NVI1	1328 aa		11.15	□□□□□ -0.62
ITCH-204	ENST00000479215	RABL6	Q3YEC7	729 aa	Predicted RBP	11.15	□□□□□ -0.62
ITCH-204	ENST00000479215	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.15	□□□□□ -0.62
ITCH-204	ENST00000479215	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
ITCH-204	ENST00000479215	TRMT44	Q8IYL2	757 aa	Known RBP	11.15	□□□□□ -0.62
ITCH-204	ENST00000479215	ZGPAT	Q8N5A5	531 aa	Known RBP	11.15	□□□□□ -0.62
ITCH-204	ENST00000479215	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.15	□□□□□ -0.62
ITCH-204	ENST00000479215	SUCLG2	Q96I99	432 aa		11.15	□□□□□ -0.62
ITCH-204	ENST00000479215	IDI2	Q9BXS1	227 aa		11.15	□□□□□ -0.62
ITCH-204	ENST00000479215	DAGLA	Q9Y4D2	1042 aa		11.15	□□□□□ -0.62
ITCH-204	ENST00000479215	UTY	O14607	1347 aa		11.14	□□□□□ -0.63
ITCH-204	ENST00000479215	CACNA1F	O60840	1977 aa		11.14	□□□□□ -0.63
ITCH-204	ENST00000479215	PHF20L1	A8MW92	1017 aa		11.14	□□□□□ -0.63
ITCH-204	ENST00000479215	SEMA3E	O15041	775 aa		11.14	□□□□□ -0.63
ITCH-204	ENST00000479215	MAGEA10	P43363	369 aa	Predicted RBP	11.14	□□□□□ -0.63
ITCH-204	ENST00000479215	MAP3K10	Q02779	954 aa		11.14	□□□□□ -0.63
ITCH-204	ENST00000479215	EXOSC9	Q06265	439 aa	Known RBP	11.14	□□□□□ -0.63
ITCH-204	ENST00000479215	NFIA	Q12857	509 aa		11.14	□□□□□ -0.63
ITCH-204	ENST00000479215	LRRC24	Q50LG9	513 aa		11.14	□□□□□ -0.63
ITCH-204	ENST00000479215		Q7L0L9	218 aa		11.14	□□□□□ -0.63
ITCH-204	ENST00000479215	VGLL2	Q8N8G2	317 aa		11.14	□□□□□ -0.63
ITCH-204	ENST00000479215	DIS3L	Q8TF46	1054 aa	Known RBP	11.14	□□□□□ -0.63
ITCH-204	ENST00000479215	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.14	□□□□□ -0.63
ITCH-204	ENST00000479215	BICC1	Q9H694	974 aa	Known RBP	11.14	□□□□□ -0.63
ITCH-204	ENST00000479215	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.14	□□□□□ -0.63
ITCH-204	ENST00000479215	FAM198A	Q9UFP1	575 aa		11.14	□□□□□ -0.63
ITCH-204	ENST00000479215	TRIM75P	A6NK02	468 aa		11.13	□□□□□ -0.63
ITCH-204	ENST00000479215	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.13	□□□□□ -0.63
ITCH-204	ENST00000479215	SYN1	P17600	705 aa		11.13	□□□□□ -0.63
ITCH-204	ENST00000479215	FGFR2	P21802	821 aa		11.13	□□□□□ -0.63
ITCH-204	ENST00000479215	OGDHL	Q9ULD0	1010 aa		11.13	□□□□□ -0.63
ITCH-204	ENST00000479215	DENND2A	Q9ULE3	1009 aa		11.13	□□□□□ -0.63
ITCH-204	ENST00000479215	ZSWIM8	A7E2V4	1837 aa		11.13	□□□□□ -0.63
ITCH-204	ENST00000479215	SALL1	Q9NSC2	1324 aa		11.12	□□□□□ -0.63
ITCH-204	ENST00000479215	TBC1D12	O60347	775 aa		11.12	□□□□□ -0.63
ITCH-204	ENST00000479215	RGS3	P49796	1198 aa		11.12	□□□□□ -0.63
ITCH-204	ENST00000479215	DIXDC1	Q155Q3	683 aa		11.12	□□□□□ -0.63
ITCH-204	ENST00000479215	KAZALD1	Q96I82	304 aa		11.12	□□□□□ -0.63
ITCH-204	ENST00000479215	OSBPL5	Q9H0X9	879 aa	Predicted RBP	11.12	□□□□□ -0.63
ITCH-204	ENST00000479215	FBXO3	Q9UK99	471 aa		11.12	□□□□□ -0.63
ITCH-204	ENST00000479215	POTEB2	H3BUK9	544 aa		11.11	□□□□□ -0.63
ITCH-204	ENST00000479215	EYA2	O00167	538 aa		11.11	□□□□□ -0.63
ITCH-204	ENST00000479215	XRCC5	P13010	732 aa	Known RBP	11.11	□□□□□ -0.63
ITCH-204	ENST00000479215	PRDX5	P30044	214 aa		11.11	□□□□□ -0.63
ITCH-204	ENST00000479215	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.11	□□□□□ -0.63
ITCH-204	ENST00000479215	CCAR1	Q8IX12	1150 aa	Known RBP	11.11	□□□□□ -0.63
ITCH-204	ENST00000479215	ZNF280C	Q8ND82	737 aa		11.11	□□□□□ -0.63
ITCH-204	ENST00000479215	SOCS4	Q8WXH5	440 aa		11.11	□□□□□ -0.63
ITCH-204	ENST00000479215	LBHD1	Q9BQE6	289 aa	Predicted RBP	11.11	□□□□□ -0.63
ITCH-204	ENST00000479215	NUDT12	Q9BQG2	462 aa		11.11	□□□□□ -0.63
ITCH-204	ENST00000479215	AS3MT	Q9HBK9	375 aa		11.11	□□□□□ -0.63
ITCH-204	ENST00000479215	CEP126	Q9P2H0	1117 aa		11.11	□□□□□ -0.63
ITCH-204	ENST00000479215		A0A1B0GUL6	1792 aa		11.11	□□□□□ -0.63
ITCH-204	ENST00000479215	COL6A3	P12111	3177 aa		11.1	□□□□□ -0.63
ITCH-204	ENST00000479215	ZBTB22	O15209	634 aa		11.1	□□□□□ -0.63
ITCH-204	ENST00000479215	NPM3	O75607	178 aa	Known RBP	11.1	□□□□□ -0.63
ITCH-204	ENST00000479215	MAP4K4	O95819	1239 aa	Predicted RBP	11.1	□□□□□ -0.63
ITCH-204	ENST00000479215	PDE3A	Q14432	1141 aa		11.1	□□□□□ -0.63
ITCH-204	ENST00000479215	DZIP1	Q86YF9	867 aa	Known RBP	11.1	□□□□□ -0.63
ITCH-204	ENST00000479215	SYMPK	Q92797	1274 aa	Known RBP	11.1	□□□□□ -0.63
ITCH-204	ENST00000479215	FAM163A	Q96GL9	167 aa	Predicted RBP	11.1	□□□□□ -0.63
ITCH-204	ENST00000479215	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
ITCH-204	ENST00000479215	PRKAG2	Q9UGJ0	569 aa		11.1	□□□□□ -0.63
ITCH-204	ENST00000479215	GJD2	Q9UKL4	321 aa		11.1	□□□□□ -0.63
ITCH-204	ENST00000479215	HDAC5	Q9UQL6	1122 aa		11.1	□□□□□ -0.63
ITCH-204	ENST00000479215	AK9	Q5TCS8	1911 aa		11.09	□□□□□ -0.63
ITCH-204	ENST00000479215	ATRNL1	Q5VV63	1379 aa		11.09	□□□□□ -0.63
ITCH-204	ENST00000479215	MAPK4	P31152	587 aa		11.09	□□□□□ -0.63
ITCH-204	ENST00000479215	IRX3	P78415	501 aa	Predicted RBP	11.09	□□□□□ -0.63
ITCH-204	ENST00000479215	SPP2	Q13103	211 aa		11.09	□□□□□ -0.63
ITCH-204	ENST00000479215	ZNF697	Q5TEC3	545 aa		11.09	□□□□□ -0.63
ITCH-204	ENST00000479215	ZFPM1	Q8IX07	1006 aa		11.09	□□□□□ -0.63
ITCH-204	ENST00000479215	ANKRD44	Q8N8A2	993 aa		11.09	□□□□□ -0.63
ITCH-204	ENST00000479215	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.09	□□□□□ -0.63
ITCH-204	ENST00000479215	LAMA3	Q16787	3333 aa		11.09	□□□□□ -0.63
ITCH-204	ENST00000479215	USP17L5	A8MUK1	530 aa		11.08	□□□□□ -0.64
ITCH-204	ENST00000479215	PRKAR2A	P13861	404 aa	Known RBP	11.08	□□□□□ -0.64
ITCH-204	ENST00000479215	CYP2B6	P20813	491 aa		11.08	□□□□□ -0.64
ITCH-204	ENST00000479215	PICALM	Q13492	652 aa		11.08	□□□□□ -0.64
ITCH-204	ENST00000479215	ATP2B3	Q16720	1220 aa		11.08	□□□□□ -0.64
ITCH-204	ENST00000479215	TREML2	Q5T2D2	321 aa		11.08	□□□□□ -0.64
ITCH-204	ENST00000479215	MAP3K21	Q5TCX8	1036 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms