RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 KCNF1Q9H3M0 494 aa7.6□□□□□ -1.19
SMNDC1-205ENST00000477763 ACSS3Q9H6R3 686 aa7.6□□□□□ -1.19
SMNDC1-205ENST00000477763 C7orf69Q9H7B7 122 aa7.6□□□□□ -1.19
SMNDC1-205ENST00000477763 FAM105AQ9NUU6 356 aa7.6□□□□□ -1.19
SMNDC1-205ENST00000477763 KRTAP9-6A0A140TA67 174 aa7.59□□□□□ -1.19
SMNDC1-205ENST00000477763 FSTP19883 344 aa7.59□□□□□ -1.19
SMNDC1-205ENST00000477763 LMNB1P20700 586 aa7.59□□□□□ -1.19
SMNDC1-205ENST00000477763 LDLRAD1Q5T700 205 aa7.59□□□□□ -1.19
SMNDC1-205ENST00000477763 MPRIPQ6WCQ1 1025 aa7.59□□□□□ -1.19
SMNDC1-205ENST00000477763 PHC3Q8NDX5 983 aa7.59□□□□□ -1.19
SMNDC1-205ENST00000477763 GAL3ST3Q96A11 431 aa7.59□□□□□ -1.19
SMNDC1-205ENST00000477763 DISC1Q9NRI5 854 aa7.59□□□□□ -1.19
SMNDC1-205ENST00000477763 FAM95CA0A1B0GW59 222 aa7.58□□□□□ -1.2
SMNDC1-205ENST00000477763 SCO2A0A1W2PP80 73 aa7.58□□□□□ -1.2
SMNDC1-205ENST00000477763 RXRBP28702 533 aa7.58□□□□□ -1.2
SMNDC1-205ENST00000477763 MAP7Q14244 749 aa7.58□□□□□ -1.2
SMNDC1-205ENST00000477763 MAP3K11Q16584 847 aa7.58□□□□□ -1.2
SMNDC1-205ENST00000477763 ARTNQ5T4W7 220 aa7.58□□□□□ -1.2
SMNDC1-205ENST00000477763 RNF43Q68DV7 783 aa7.58□□□□□ -1.2
SMNDC1-205ENST00000477763 ERMP1Q7Z2K6 904 aa7.58□□□□□ -1.2
SMNDC1-205ENST00000477763 CCDC84Q86UT8 332 aaPredicted RBP7.58□□□□□ -1.2
SMNDC1-205ENST00000477763 TRIM42Q8IWZ5 723 aa7.58□□□□□ -1.2
SMNDC1-205ENST00000477763 FBLIM1Q8WUP2 373 aa7.58□□□□□ -1.2
SMNDC1-205ENST00000477763 PCDHA4Q9UN74 947 aa7.58□□□□□ -1.2
SMNDC1-205ENST00000477763 HMX2A2RU54 273 aa7.57□□□□□ -1.2
SMNDC1-205ENST00000477763 TFE3P19532 575 aaPredicted RBP7.57□□□□□ -1.2
SMNDC1-205ENST00000477763 TSNAXIP1Q2TAA8 658 aa7.57□□□□□ -1.2
SMNDC1-205ENST00000477763 PAOXQ6QHF9 649 aa7.57□□□□□ -1.2
SMNDC1-205ENST00000477763 RELL1Q8IUW5 271 aa7.57□□□□□ -1.2
SMNDC1-205ENST00000477763 RNF214Q8ND24 703 aa7.57□□□□□ -1.2
SMNDC1-205ENST00000477763 TMEM74Q96NL1 305 aa7.57□□□□□ -1.2
SMNDC1-205ENST00000477763 BACH2Q9BYV9 841 aa7.57□□□□□ -1.2
SMNDC1-205ENST00000477763 MIR1-1HGQ9H1L0 117 aa7.57□□□□□ -1.2
SMNDC1-205ENST00000477763 SEMA6CQ9H3T2 930 aa7.57□□□□□ -1.2
SMNDC1-205ENST00000477763 PIDD1Q9HB75 910 aa7.57□□□□□ -1.2
SMNDC1-205ENST00000477763 METTL5Q9NRN9 209 aaKnown RBP7.57□□□□□ -1.2
SMNDC1-205ENST00000477763 IGLV1-40P01703 118 aa7.56□□□□□ -1.2
SMNDC1-205ENST00000477763 RAB6AP20340 208 aa7.56□□□□□ -1.2
SMNDC1-205ENST00000477763 LMNB2Q03252 620 aa7.56□□□□□ -1.2
SMNDC1-205ENST00000477763 PTPN11Q06124 597 aaPredicted RBP7.56□□□□□ -1.2
SMNDC1-205ENST00000477763 RING1Q06587 406 aa7.56□□□□□ -1.2
SMNDC1-205ENST00000477763 NFIAQ12857 509 aa7.56□□□□□ -1.2
SMNDC1-205ENST00000477763 DIEXFQ68CQ4 756 aaKnown RBP7.56□□□□□ -1.2
SMNDC1-205ENST00000477763 HS2ST1Q7LGA3 356 aa7.56□□□□□ -1.2
SMNDC1-205ENST00000477763 TMEM87AQ8NBN3 555 aa7.56□□□□□ -1.2
SMNDC1-205ENST00000477763 RHOVQ96L33 236 aa7.56□□□□□ -1.2
SMNDC1-205ENST00000477763 DBNDD2Q9BQY9 259 aa7.56□□□□□ -1.2
SMNDC1-205ENST00000477763 ZFP64Q9NPA5 681 aa7.56□□□□□ -1.2
SMNDC1-205ENST00000477763 PCDHB5Q9Y5E4 795 aa7.56□□□□□ -1.2
SMNDC1-205ENST00000477763 SNCAIPQ9Y6H5 919 aa7.56□□□□□ -1.2
SMNDC1-205ENST00000477763 NFICP08651 508 aa7.55□□□□□ -1.2
SMNDC1-205ENST00000477763 TTLL4Q14679 1199 aa7.55□□□□□ -1.2
SMNDC1-205ENST00000477763 HDXQ7Z353 690 aa7.55□□□□□ -1.2
SMNDC1-205ENST00000477763 TLR6Q9Y2C9 796 aa7.55□□□□□ -1.2
SMNDC1-205ENST00000477763 TACC3Q9Y6A5 838 aa7.55□□□□□ -1.2
SMNDC1-205ENST00000477763 FANCGO15287 622 aa7.54□□□□□ -1.2
SMNDC1-205ENST00000477763 RECKO95980 971 aa7.54□□□□□ -1.2
SMNDC1-205ENST00000477763 GBP2P32456 591 aaPredicted RBP7.54□□□□□ -1.2
SMNDC1-205ENST00000477763 SEPT6Q14141 434 aa7.54□□□□□ -1.2
SMNDC1-205ENST00000477763 NFKBIBQ15653 356 aa7.54□□□□□ -1.2
SMNDC1-205ENST00000477763 SEZ6L2Q6UXD5 910 aa7.54□□□□□ -1.2
SMNDC1-205ENST00000477763 CYFIP1Q7L576 1253 aa7.54□□□□□ -1.2
SMNDC1-205ENST00000477763 SMYD4Q8IYR2 804 aaPredicted RBP7.54□□□□□ -1.2
SMNDC1-205ENST00000477763 ELMO3Q96BJ8 720 aa7.54□□□□□ -1.2
SMNDC1-205ENST00000477763 DCDC2CA8MYV0 355 aa7.53□□□□□ -1.2
SMNDC1-205ENST00000477763 NEFMP07197 916 aa7.53□□□□□ -1.2
SMNDC1-205ENST00000477763 ZNF76P36508 570 aa7.53□□□□□ -1.2
SMNDC1-205ENST00000477763 CAMK2GQ13555 558 aaPredicted RBP7.53□□□□□ -1.2
SMNDC1-205ENST00000477763 INPP5AQ14642 412 aa7.53□□□□□ -1.2
SMNDC1-205ENST00000477763 ZBTB37Q5TC79 503 aa7.53□□□□□ -1.2
SMNDC1-205ENST00000477763 LRFN4Q6PJG9 635 aa7.53□□□□□ -1.2
SMNDC1-205ENST00000477763 PLPPR2Q96GM1 343 aa7.53□□□□□ -1.2
SMNDC1-205ENST00000477763 KCNQ5Q9NR82 932 aa7.53□□□□□ -1.2
SMNDC1-205ENST00000477763 KBTBD4Q9NVX7 518 aa7.53□□□□□ -1.2
SMNDC1-205ENST00000477763 PRKAG2Q9UGJ0 569 aa7.53□□□□□ -1.2
SMNDC1-205ENST00000477763 GGT7Q9UJ14 662 aa7.53□□□□□ -1.2
SMNDC1-205ENST00000477763 PCOLCE2Q9UKZ9 415 aa7.53□□□□□ -1.2
SMNDC1-205ENST00000477763 SCAMP3O14828 347 aaKnown RBP7.52□□□□□ -1.21
SMNDC1-205ENST00000477763 PF4P02776 101 aa7.52□□□□□ -1.21
SMNDC1-205ENST00000477763 HCLS1P14317 486 aaPredicted RBP7.52□□□□□ -1.21
SMNDC1-205ENST00000477763 NTF4P34130 210 aa7.52□□□□□ -1.21
SMNDC1-205ENST00000477763 RPL6Q02878 288 aaKnown RBP7.52□□□□□ -1.21
SMNDC1-205ENST00000477763 CPSF6Q16630 551 aaKnown RBP eCLIP7.52□□□□□ -1.21
SMNDC1-205ENST00000477763 PPM1JQ5JR12 505 aa7.52□□□□□ -1.21
SMNDC1-205ENST00000477763 WIPI1Q5MNZ9 446 aaPredicted RBP7.52□□□□□ -1.21
SMNDC1-205ENST00000477763 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.52□□□□□ -1.21
SMNDC1-205ENST00000477763 C12orf40Q86WS4 652 aa7.52□□□□□ -1.21
SMNDC1-205ENST00000477763 KCT2Q8NC54 265 aa7.52□□□□□ -1.21
SMNDC1-205ENST00000477763 GIMAP7Q8NHV1 300 aa7.52□□□□□ -1.21
SMNDC1-205ENST00000477763 ISL2Q96A47 359 aa7.52□□□□□ -1.21
SMNDC1-205ENST00000477763 DAGLAQ9Y4D2 1042 aa7.52□□□□□ -1.21
SMNDC1-205ENST00000477763 GFRA2O00451 464 aa7.51□□□□□ -1.21
SMNDC1-205ENST00000477763 RNGTTO60942 597 aaKnown RBP7.51□□□□□ -1.21
SMNDC1-205ENST00000477763 TCF3P15923 654 aa7.51□□□□□ -1.21
SMNDC1-205ENST00000477763 FANCCQ00597 558 aa7.51□□□□□ -1.21
SMNDC1-205ENST00000477763 ZAR1Q86SH2 424 aa7.51□□□□□ -1.21
SMNDC1-205ENST00000477763 ZDHHC13Q8IUH4 622 aa7.51□□□□□ -1.21
SMNDC1-205ENST00000477763 GATAD2BQ8WXI9 593 aa7.51□□□□□ -1.21
SMNDC1-205ENST00000477763 GATA6Q92908 595 aa7.51□□□□□ -1.21
SMNDC1-205ENST00000477763 COPRSQ9NQ92 184 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms