RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 ASTN2O75129 1339 aaPredicted RBP8.24□□□□□ -1.09
LINC00173-202ENST00000477702 CDHR2Q9BYE9 1310 aa8.24□□□□□ -1.09
LINC00173-202ENST00000477702 RANBP2P49792 3224 aaKnown RBP8.24□□□□□ -1.09
LINC00173-202ENST00000477702 COL6A3P12111 3177 aa8.23□□□□□ -1.09
LINC00173-202ENST00000477702 POLR2AP24928 1970 aaKnown RBP8.23□□□□□ -1.09
LINC00173-202ENST00000477702 YDJCA8MPS7 323 aa8.23□□□□□ -1.09
LINC00173-202ENST00000477702 H0YGN5 161 aa8.23□□□□□ -1.09
LINC00173-202ENST00000477702 CLDN10P78369 228 aa8.23□□□□□ -1.09
LINC00173-202ENST00000477702 NBPF10Q6P3W6 841 aaKnown RBP8.23□□□□□ -1.09
LINC00173-202ENST00000477702 MORC1Q86VD1 984 aa8.23□□□□□ -1.09
LINC00173-202ENST00000477702 CRAMP1Q96RY5 1269 aa8.23□□□□□ -1.09
LINC00173-202ENST00000477702 TMX4Q9H1E5 349 aaPredicted RBP8.23□□□□□ -1.09
LINC00173-202ENST00000477702 OSBPL3Q9H4L5 887 aa8.23□□□□□ -1.09
LINC00173-202ENST00000477702 KIAA1024Q9UPX6 916 aa8.23□□□□□ -1.09
LINC00173-202ENST00000477702 FKTNO75072 461 aa8.22□□□□□ -1.09
LINC00173-202ENST00000477702 GPTP24298 496 aa8.22□□□□□ -1.09
LINC00173-202ENST00000477702 CRTC2Q53ET0 693 aaPredicted RBP8.22□□□□□ -1.09
LINC00173-202ENST00000477702 DPP8Q6V1X1 898 aaPredicted RBP8.22□□□□□ -1.09
LINC00173-202ENST00000477702 MOB2Q70IA6 237 aa8.22□□□□□ -1.09
LINC00173-202ENST00000477702 NGEFQ8N5V2 710 aa8.22□□□□□ -1.09
LINC00173-202ENST00000477702 PBXIP1Q96AQ6 731 aa8.22□□□□□ -1.09
LINC00173-202ENST00000477702 CDCA5Q96FF9 252 aa8.22□□□□□ -1.09
LINC00173-202ENST00000477702 VRTNQ9H8Y1 702 aa8.22□□□□□ -1.09
LINC00173-202ENST00000477702 PGPEP1Q9NXJ5 209 aa8.22□□□□□ -1.09
LINC00173-202ENST00000477702 ATP6V0A2Q9Y487 856 aa8.22□□□□□ -1.09
LINC00173-202ENST00000477702 KIF7Q2M1P5 1343 aa8.22□□□□□ -1.09
LINC00173-202ENST00000477702 CENPFP49454 3210 aa8.21□□□□□ -1.09
LINC00173-202ENST00000477702 BTBD11A6QL63 1104 aa8.21□□□□□ -1.1
LINC00173-202ENST00000477702 UBE2Q2LH0YL09 131 aa8.21□□□□□ -1.1
LINC00173-202ENST00000477702 PSMD14O00487 310 aa8.21□□□□□ -1.1
LINC00173-202ENST00000477702 GTF2IP78347 998 aa8.21□□□□□ -1.1
LINC00173-202ENST00000477702 KIAA2012Q0VF49 1180 aa8.21□□□□□ -1.1
LINC00173-202ENST00000477702 USP4Q13107 963 aa8.21□□□□□ -1.1
LINC00173-202ENST00000477702 SUPT20HQ8NEM7 779 aa8.21□□□□□ -1.1
LINC00173-202ENST00000477702 AGBL1Q96MI9 1066 aa8.21□□□□□ -1.1
LINC00173-202ENST00000477702 RTFDC1Q9BY42 306 aaPredicted RBP8.21□□□□□ -1.1
LINC00173-202ENST00000477702 NYXQ9GZU5 481 aa8.21□□□□□ -1.1
LINC00173-202ENST00000477702 VPS33BQ9H267 617 aa8.21□□□□□ -1.1
LINC00173-202ENST00000477702 GGA3Q9NZ52 723 aa8.21□□□□□ -1.1
LINC00173-202ENST00000477702 NOD1Q9Y239 953 aa8.21□□□□□ -1.1
LINC00173-202ENST00000477702 TRIM17Q9Y577 477 aa8.21□□□□□ -1.1
LINC00173-202ENST00000477702 PCDHGA11Q9Y5H2 935 aa8.21□□□□□ -1.1
LINC00173-202ENST00000477702 RIC1Q4ADV7 1423 aa8.2□□□□□ -1.1
LINC00173-202ENST00000477702 PAPPA2Q9BXP8 1791 aa8.2□□□□□ -1.1
LINC00173-202ENST00000477702 GNAT3A8MTJ3 354 aa8.2□□□□□ -1.1
LINC00173-202ENST00000477702 NRG2O14511 850 aaPredicted RBP8.2□□□□□ -1.1
LINC00173-202ENST00000477702 ZBTB7BO15156 539 aaPredicted RBP8.2□□□□□ -1.1
LINC00173-202ENST00000477702 RASA1P20936 1047 aa8.2□□□□□ -1.1
LINC00173-202ENST00000477702 INTS3Q68E01 1043 aaKnown RBP8.2□□□□□ -1.1
LINC00173-202ENST00000477702 OGFOD1Q8N543 542 aa8.2□□□□□ -1.1
LINC00173-202ENST00000477702 KDF1Q8NAX2 398 aaPredicted RBP8.2□□□□□ -1.1
LINC00173-202ENST00000477702 ZNF594Q96JF6 807 aaPredicted RBP8.2□□□□□ -1.1
LINC00173-202ENST00000477702 KCNQ5Q9NR82 932 aa8.2□□□□□ -1.1
LINC00173-202ENST00000477702 SCAF8Q9UPN6 1271 aaKnown RBP8.2□□□□□ -1.1
LINC00173-202ENST00000477702 CARNS1A5YM72 827 aa8.19□□□□□ -1.1
LINC00173-202ENST00000477702 LZTS3O60299 673 aaPredicted RBP8.19□□□□□ -1.1
LINC00173-202ENST00000477702 MYCP01106 439 aaPredicted RBP8.19□□□□□ -1.1
LINC00173-202ENST00000477702 SNRPA1P09661 255 aaKnown RBP8.19□□□□□ -1.1
LINC00173-202ENST00000477702 KIF4BQ2VIQ3 1234 aa8.19□□□□□ -1.1
LINC00173-202ENST00000477702 PRAMEF18Q5VWM3 479 aa8.19□□□□□ -1.1
LINC00173-202ENST00000477702 SUSD4Q5VX71 490 aa8.19□□□□□ -1.1
LINC00173-202ENST00000477702 OTOP1Q7RTM1 612 aa8.19□□□□□ -1.1
LINC00173-202ENST00000477702 DPF2Q92785 391 aa8.19□□□□□ -1.1
LINC00173-202ENST00000477702 PANK3Q9H999 370 aa8.19□□□□□ -1.1
LINC00173-202ENST00000477702 BRCA2P51587 3418 aa8.19□□□□□ -1.1
LINC00173-202ENST00000477702 ABCC4O15439 1325 aa8.19□□□□□ -1.1
LINC00173-202ENST00000477702 UBN2Q6ZU65 1347 aa8.19□□□□□ -1.1
LINC00173-202ENST00000477702 USP17L15C9J2P7 530 aa8.18□□□□□ -1.1
LINC00173-202ENST00000477702 USP17L10C9JJH3 530 aa8.18□□□□□ -1.1
LINC00173-202ENST00000477702 USP17L13C9JLJ4 530 aa8.18□□□□□ -1.1
LINC00173-202ENST00000477702 USP17L12C9JPN9 530 aa8.18□□□□□ -1.1
LINC00173-202ENST00000477702 USP17L11C9JVI0 530 aa8.18□□□□□ -1.1
LINC00173-202ENST00000477702 USP17L21D6R901 530 aa8.18□□□□□ -1.1
LINC00173-202ENST00000477702 USP17L18D6R9N7 530 aa8.18□□□□□ -1.1
LINC00173-202ENST00000477702 USP17L22D6RA61 530 aa8.18□□□□□ -1.1
LINC00173-202ENST00000477702 USP17L17D6RBQ6 530 aa8.18□□□□□ -1.1
LINC00173-202ENST00000477702 USP17L19D6RCP7 530 aa8.18□□□□□ -1.1
LINC00173-202ENST00000477702 USP17L20D6RJB6 530 aa8.18□□□□□ -1.1
LINC00173-202ENST00000477702 CAPN5O15484 640 aaPredicted RBP8.18□□□□□ -1.1
LINC00173-202ENST00000477702 TM4SF4P48230 202 aa8.18□□□□□ -1.1
LINC00173-202ENST00000477702 USP17L24Q0WX57 530 aa8.18□□□□□ -1.1
LINC00173-202ENST00000477702 PTK7Q13308 1070 aa8.18□□□□□ -1.1
LINC00173-202ENST00000477702 NOM1Q5C9Z4 860 aaKnown RBP8.18□□□□□ -1.1
LINC00173-202ENST00000477702 ANGEL2Q5VTE6 544 aaKnown RBP8.18□□□□□ -1.1
LINC00173-202ENST00000477702 DBNDD1Q9H9R9 158 aa8.18□□□□□ -1.1
LINC00173-202ENST00000477702 RAB6BQ9NRW1 208 aa8.18□□□□□ -1.1
LINC00173-202ENST00000477702 DNAAF2Q9NVR5 837 aaKnown RBP8.18□□□□□ -1.1
LINC00173-202ENST00000477702 ATP5J2-PTCD1G3V325 749 aa8.17□□□□□ -1.1
LINC00173-202ENST00000477702 ST8SIA5O15466 376 aa8.17□□□□□ -1.1
LINC00173-202ENST00000477702 DKK1O94907 266 aa8.17□□□□□ -1.1
LINC00173-202ENST00000477702 AVPP01185 164 aa8.17□□□□□ -1.1
LINC00173-202ENST00000477702 RELBQ01201 579 aa8.17□□□□□ -1.1
LINC00173-202ENST00000477702 PKDCCQ504Y2 493 aa8.17□□□□□ -1.1
LINC00173-202ENST00000477702 TTLL7Q6ZT98 887 aa8.17□□□□□ -1.1
LINC00173-202ENST00000477702 Q6ZVU0 165 aa8.17□□□□□ -1.1
LINC00173-202ENST00000477702 SP8Q8IXZ3 490 aa8.17□□□□□ -1.1
LINC00173-202ENST00000477702 STK32AQ8WU08 396 aa8.17□□□□□ -1.1
LINC00173-202ENST00000477702 NLRP3Q96P20 1036 aa8.17□□□□□ -1.1
LINC00173-202ENST00000477702 ZMIZ1Q9ULJ6 1067 aa8.17□□□□□ -1.1
LINC00173-202ENST00000477702 PTPN22Q9Y2R2 807 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms