RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 CERS3Q8IU89 383 aa18.44■□□□□ 0.54
SEC13-215ENST00000477547 LCORLQ8N3X6 602 aa18.44■□□□□ 0.54
SEC13-215ENST00000477547 FAM227BQ96M60 508 aa18.44■□□□□ 0.54
SEC13-215ENST00000477547 RIOK1Q9BRS2 568 aaKnown RBP18.44■□□□□ 0.54
SEC13-215ENST00000477547 MCOLN1Q9GZU1 580 aa18.44■□□□□ 0.54
SEC13-215ENST00000477547 PUS7LQ9H0K6 701 aaKnown RBP18.44■□□□□ 0.54
SEC13-215ENST00000477547 VEZTQ9HBM0 779 aa18.44■□□□□ 0.54
SEC13-215ENST00000477547 CDC45O75419 566 aa18.43■□□□□ 0.54
SEC13-215ENST00000477547 CACNB3P54284 484 aa18.43■□□□□ 0.54
SEC13-215ENST00000477547 RHBDL3P58872 404 aa18.43■□□□□ 0.54
SEC13-215ENST00000477547 ANGEL2Q5VTE6 544 aaKnown RBP18.43■□□□□ 0.54
SEC13-215ENST00000477547 TEX11Q8IYF3 940 aa18.43■□□□□ 0.54
SEC13-215ENST00000477547 SH3RF3Q8TEJ3 882 aaPredicted RBP18.43■□□□□ 0.54
SEC13-215ENST00000477547 OSBP2Q969R2 916 aa18.43■□□□□ 0.54
SEC13-215ENST00000477547 ARMT1Q9H993 441 aa18.43■□□□□ 0.54
SEC13-215ENST00000477547 USP40Q9NVE5 1235 aa18.43■□□□□ 0.54
SEC13-215ENST00000477547 ZNF70Q9UC06 446 aaPredicted RBP18.43■□□□□ 0.54
SEC13-215ENST00000477547 CASP8AP2Q9UKL3 1982 aa18.43■□□□□ 0.54
SEC13-215ENST00000477547 TNRC18O15417 2968 aaPredicted RBP18.42■□□□□ 0.54
SEC13-215ENST00000477547 GPAA1O43292 621 aa18.42■□□□□ 0.54
SEC13-215ENST00000477547 PPP4CP60510 307 aa18.42■□□□□ 0.54
SEC13-215ENST00000477547 CWC27Q6UX04 472 aaKnown RBP18.42■□□□□ 0.54
SEC13-215ENST00000477547 APOBEC3FQ8IUX4 373 aaKnown RBP18.42■□□□□ 0.54
SEC13-215ENST00000477547 SEC62Q99442 399 aaKnown RBP18.42■□□□□ 0.54
SEC13-215ENST00000477547 PITPNM2Q9BZ72 1349 aa18.42■□□□□ 0.54
SEC13-215ENST00000477547 CHMLP26374 656 aa18.41■□□□□ 0.54
SEC13-215ENST00000477547 ZC3H15Q8WU90 426 aaKnown RBP18.41■□□□□ 0.54
SEC13-215ENST00000477547 CRNKL1Q9BZJ0 848 aaKnown RBP18.41■□□□□ 0.54
SEC13-215ENST00000477547 HELLSQ9NRZ9 838 aa18.41■□□□□ 0.54
SEC13-215ENST00000477547 TLL2Q9Y6L7 1015 aa18.41■□□□□ 0.54
SEC13-215ENST00000477547 RAD50Q92878 1312 aa18.41■□□□□ 0.54
SEC13-215ENST00000477547 CCDC171Q6TFL3 1326 aa18.4■□□□□ 0.54
SEC13-215ENST00000477547 WDHD1O75717 1129 aaPredicted RBP18.4■□□□□ 0.54
SEC13-215ENST00000477547 TNFAIP1Q13829 316 aa18.4■□□□□ 0.54
SEC13-215ENST00000477547 CASC1Q6TDU7 716 aa18.4■□□□□ 0.54
SEC13-215ENST00000477547 CCDC129Q6ZRS4 1044 aa18.4■□□□□ 0.54
SEC13-215ENST00000477547 DCPSQ96C86 337 aaKnown RBP18.4■□□□□ 0.54
SEC13-215ENST00000477547 COL2A1P02458 1487 aaPredicted RBP18.39■□□□□ 0.53
SEC13-215ENST00000477547 RPAP1Q9BWH6 1393 aaPredicted RBP18.39■□□□□ 0.53
SEC13-215ENST00000477547 FLT1P17948 1338 aa18.39■□□□□ 0.53
SEC13-215ENST00000477547 TCP10L2B9ZVM9 353 aa18.39■□□□□ 0.53
SEC13-215ENST00000477547 NFIAQ12857 509 aa18.39■□□□□ 0.53
SEC13-215ENST00000477547 PICALMQ13492 652 aa18.39■□□□□ 0.53
SEC13-215ENST00000477547 MCMDC2Q4G0Z9 681 aa18.39■□□□□ 0.53
SEC13-215ENST00000477547 ZNF589Q86UQ0 364 aaPredicted RBP18.39■□□□□ 0.53
SEC13-215ENST00000477547 RUFY2Q8WXA3 655 aa18.39■□□□□ 0.53
SEC13-215ENST00000477547 SCAF8Q9UPN6 1271 aaKnown RBP18.39■□□□□ 0.53
SEC13-215ENST00000477547 OTOFQ9HC10 1997 aa18.39■□□□□ 0.53
SEC13-215ENST00000477547 USP5P45974 858 aa18.38■□□□□ 0.53
SEC13-215ENST00000477547 TNNI2P48788 182 aa18.38■□□□□ 0.53
SEC13-215ENST00000477547 FKBP1CQ5VVH2 108 aa18.38■□□□□ 0.53
SEC13-215ENST00000477547 SULF1Q8IWU6 871 aa18.38■□□□□ 0.53
SEC13-215ENST00000477547 TGFBRAP1Q8WUH2 860 aa18.38■□□□□ 0.53
SEC13-215ENST00000477547 IDI2Q9BXS1 227 aa18.38■□□□□ 0.53
SEC13-215ENST00000477547 DDX4Q9NQI0 724 aaKnown RBP18.38■□□□□ 0.53
SEC13-215ENST00000477547 ATAD5Q96QE3 1844 aa18.37■□□□□ 0.53
SEC13-215ENST00000477547 ADM5C9JUS6 153 aa18.37■□□□□ 0.53
SEC13-215ENST00000477547 MAP2K2P36507 400 aa18.37■□□□□ 0.53
SEC13-215ENST00000477547 MFAP1P55081 439 aaKnown RBP18.37■□□□□ 0.53
SEC13-215ENST00000477547 KRT26Q7Z3Y9 468 aa18.37■□□□□ 0.53
SEC13-215ENST00000477547 MAPKAPK5Q8IW41 473 aa18.37■□□□□ 0.53
SEC13-215ENST00000477547 SDR42E1Q8WUS8 393 aa18.37■□□□□ 0.53
SEC13-215ENST00000477547 STRBPQ96SI9 672 aaKnown RBP18.37■□□□□ 0.53
SEC13-215ENST00000477547 IL25Q9H293 177 aa18.37■□□□□ 0.53
SEC13-215ENST00000477547 FAM198AQ9UFP1 575 aa18.37■□□□□ 0.53
SEC13-215ENST00000477547 PGAP2Q9UHJ9 254 aa18.37■□□□□ 0.53
SEC13-215ENST00000477547 SLC4A4Q9Y6R1 1079 aa18.37■□□□□ 0.53
SEC13-215ENST00000477547 PAPPA2Q9BXP8 1791 aa18.37■□□□□ 0.53
SEC13-215ENST00000477547 PRKAB2O43741 272 aa18.36■□□□□ 0.53
SEC13-215ENST00000477547 GNAT2P19087 354 aa18.36■□□□□ 0.53
SEC13-215ENST00000477547 TCP10Q12799 353 aa18.36■□□□□ 0.53
SEC13-215ENST00000477547 DGKZQ13574 1117 aa18.36■□□□□ 0.53
SEC13-215ENST00000477547 ENTPD3O75355 529 aa18.35■□□□□ 0.53
SEC13-215ENST00000477547 SAPCD2Q86UD0 394 aa18.35■□□□□ 0.53
SEC13-215ENST00000477547 FAM83AQ86UY5 434 aa18.35■□□□□ 0.53
SEC13-215ENST00000477547 ESYT1Q9BSJ8 1104 aa18.35■□□□□ 0.53
SEC13-215ENST00000477547 GLIS2Q9BZE0 524 aaPredicted RBP18.35■□□□□ 0.53
SEC13-215ENST00000477547 OSBPL5Q9H0X9 879 aaPredicted RBP18.35■□□□□ 0.53
SEC13-215ENST00000477547 PPP2R3BQ9Y5P8 575 aa18.35■□□□□ 0.53
SEC13-215ENST00000477547 SSC5DA1L4H1 1573 aa18.34■□□□□ 0.53
SEC13-215ENST00000477547 SGSM2O43147 1006 aa18.34■□□□□ 0.53
SEC13-215ENST00000477547 CELF2O95319 508 aaKnown RBP18.34■□□□□ 0.53
SEC13-215ENST00000477547 RASA3Q14644 834 aa18.34■□□□□ 0.53
SEC13-215ENST00000477547 DDRGK1Q96HY6 314 aa18.34■□□□□ 0.53
SEC13-215ENST00000477547 TMEM39BQ9GZU3 492 aa18.34■□□□□ 0.53
SEC13-215ENST00000477547 DEFB129Q9H1M3 183 aa18.34■□□□□ 0.53
SEC13-215ENST00000477547 EPB41L4AQ9HCS5 686 aaPredicted RBP18.34■□□□□ 0.53
SEC13-215ENST00000477547 ATRNL1Q5VV63 1379 aa18.34■□□□□ 0.53
SEC13-215ENST00000477547 NPM3O75607 178 aaKnown RBP18.33■□□□□ 0.53
SEC13-215ENST00000477547 APPP05067 770 aa18.33■□□□□ 0.53
SEC13-215ENST00000477547 TDO2P48775 406 aa18.33■□□□□ 0.53
SEC13-215ENST00000477547 VPS53Q5VIR6 699 aa18.33■□□□□ 0.53
SEC13-215ENST00000477547 CDC37L1Q7L3B6 337 aa18.33■□□□□ 0.53
SEC13-215ENST00000477547 USP48Q86UV5 1035 aa18.33■□□□□ 0.53
SEC13-215ENST00000477547 ZSCAN29Q8IWY8 852 aaPredicted RBP18.33■□□□□ 0.53
SEC13-215ENST00000477547 FAM151AQ8WW52 585 aa18.33■□□□□ 0.53
SEC13-215ENST00000477547 DCP1AQ9NPI6 582 aaPredicted RBP18.33■□□□□ 0.53
SEC13-215ENST00000477547 ATP8A2Q9NTI2 1148 aa18.33■□□□□ 0.53
SEC13-215ENST00000477547 SAP30BPQ9UHR5 308 aaKnown RBP18.33■□□□□ 0.53
SEC13-215ENST00000477547 DOCK1Q14185 1865 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms