RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 GNRH1P01148 92 aa14.97□□□□□ -0.01
HDAC6-219ENST00000476625 LDHBP07195 334 aaKnown RBP14.97□□□□□ -0.01
HDAC6-219ENST00000476625 PTPRAP18433 802 aa14.97□□□□□ -0.01
HDAC6-219ENST00000476625 PRMT2P55345 433 aa14.97□□□□□ -0.01
HDAC6-219ENST00000476625 PICALMQ13492 652 aa14.97□□□□□ -0.01
HDAC6-219ENST00000476625 U2AF1L4Q8WU68 220 aaKnown RBP14.97□□□□□ -0.01
HDAC6-219ENST00000476625 PRO3102Q9H379 93 aa14.97□□□□□ -0.01
HDAC6-219ENST00000476625 TAOK2Q9UL54 1235 aa14.97□□□□□ -0.01
HDAC6-219ENST00000476625 CDK5RAP2Q96SN8 1893 aa14.97□□□□□ -0.01
HDAC6-219ENST00000476625 PTPRCP08575 1304 aa14.96□□□□□ -0.01
HDAC6-219ENST00000476625 A0A0G2JLL6 359 aaPredicted RBP14.96□□□□□ -0.01
HDAC6-219ENST00000476625 FARP2O94887 1054 aaPredicted RBP14.96□□□□□ -0.01
HDAC6-219ENST00000476625 GJB1P08034 283 aa14.96□□□□□ -0.01
HDAC6-219ENST00000476625 FLT3LGP49771 235 aa14.96□□□□□ -0.01
HDAC6-219ENST00000476625 FCGRTP55899 365 aa14.96□□□□□ -0.01
HDAC6-219ENST00000476625 DDX60LQ5H9U9 1706 aaKnown RBP14.96□□□□□ -0.01
HDAC6-219ENST00000476625 PRRT2Q7Z6L0 340 aaPredicted RBP14.96□□□□□ -0.01
HDAC6-219ENST00000476625 SCYL3Q8IZE3 742 aa14.96□□□□□ -0.01
HDAC6-219ENST00000476625 DIS3LQ8TF46 1054 aaKnown RBP14.96□□□□□ -0.01
HDAC6-219ENST00000476625 CDCA7LQ96GN5 454 aa14.96□□□□□ -0.01
HDAC6-219ENST00000476625 PARK7Q99497 189 aaKnown RBP14.96□□□□□ -0.01
HDAC6-219ENST00000476625 MYO5AQ9Y4I1 1855 aaKnown RBP14.96□□□□□ -0.01
HDAC6-219ENST00000476625 TRIM75PA6NK02 468 aa14.95□□□□□ -0.02
HDAC6-219ENST00000476625 ADCY3O60266 1144 aa14.95□□□□□ -0.02
HDAC6-219ENST00000476625 PEX10O60683 326 aa14.95□□□□□ -0.02
HDAC6-219ENST00000476625 INHAP05111 366 aa14.95□□□□□ -0.02
HDAC6-219ENST00000476625 TREML2Q5T2D2 321 aa14.95□□□□□ -0.02
HDAC6-219ENST00000476625 ZNF384Q8TF68 577 aa14.95□□□□□ -0.02
HDAC6-219ENST00000476625 AFG3L2Q9Y4W6 797 aa14.95□□□□□ -0.02
HDAC6-219ENST00000476625 ZBTB7BO15156 539 aaPredicted RBP14.94□□□□□ -0.02
HDAC6-219ENST00000476625 HOXD10P28358 340 aa14.94□□□□□ -0.02
HDAC6-219ENST00000476625 TRIM32Q13049 653 aa14.94□□□□□ -0.02
HDAC6-219ENST00000476625 RASGRF1Q13972 1273 aa14.94□□□□□ -0.02
HDAC6-219ENST00000476625 CCDC102BQ68D86 513 aa14.94□□□□□ -0.02
HDAC6-219ENST00000476625 PI16Q6UXB8 463 aa14.94□□□□□ -0.02
HDAC6-219ENST00000476625 ZSCAN29Q8IWY8 852 aaPredicted RBP14.94□□□□□ -0.02
HDAC6-219ENST00000476625 ANKRD13CQ8N6S4 541 aa14.94□□□□□ -0.02
HDAC6-219ENST00000476625 LRCH3Q96II8 777 aa14.94□□□□□ -0.02
HDAC6-219ENST00000476625 DEFB118Q96PH6 123 aa14.94□□□□□ -0.02
HDAC6-219ENST00000476625 LRRFIP2Q9Y608 721 aaKnown RBP14.94□□□□□ -0.02
HDAC6-219ENST00000476625 GAKO14976 1311 aa14.93□□□□□ -0.02
HDAC6-219ENST00000476625 CEP290O15078 2479 aa14.93□□□□□ -0.02
HDAC6-219ENST00000476625 CXCL11O14625 94 aa14.93□□□□□ -0.02
HDAC6-219ENST00000476625 SGPL1O95470 568 aa14.93□□□□□ -0.02
HDAC6-219ENST00000476625 BTDP43251 543 aa14.93□□□□□ -0.02
HDAC6-219ENST00000476625 TIMM10P62072 90 aa14.93□□□□□ -0.02
HDAC6-219ENST00000476625 UBXN2AP68543 259 aa14.93□□□□□ -0.02
HDAC6-219ENST00000476625 RRP1BQ14684 758 aaKnown RBP14.93□□□□□ -0.02
HDAC6-219ENST00000476625 SLAIN1Q8ND83 568 aa14.93□□□□□ -0.02
HDAC6-219ENST00000476625 ABCF2Q9UG63 623 aa14.93□□□□□ -0.02
HDAC6-219ENST00000476625 SALL1Q9NSC2 1324 aa14.92□□□□□ -0.02
HDAC6-219ENST00000476625 TNPO2O14787 897 aaKnown RBP14.92□□□□□ -0.02
HDAC6-219ENST00000476625 MEIS3Q99687 375 aa14.92□□□□□ -0.02
HDAC6-219ENST00000476625 IDI2Q9BXS1 227 aa14.92□□□□□ -0.02
HDAC6-219ENST00000476625 PICK1Q9NRD5 415 aa14.92□□□□□ -0.02
HDAC6-219ENST00000476625 CEP126Q9P2H0 1117 aa14.92□□□□□ -0.02
HDAC6-219ENST00000476625 STAP2Q9UGK3 403 aa14.92□□□□□ -0.02
HDAC6-219ENST00000476625 UBTFL1P0CB47 393 aaPredicted RBP14.91□□□□□ -0.02
HDAC6-219ENST00000476625 SHROOM1Q2M3G4 852 aaPredicted RBP14.91□□□□□ -0.02
HDAC6-219ENST00000476625 TBC1D9Q6ZT07 1266 aa14.91□□□□□ -0.02
HDAC6-219ENST00000476625 DZIP1Q86YF9 867 aaKnown RBP14.91□□□□□ -0.02
HDAC6-219ENST00000476625 NKX2-3Q8TAU0 364 aa14.91□□□□□ -0.02
HDAC6-219ENST00000476625 HTATIP2Q9BUP3 242 aa14.91□□□□□ -0.02
HDAC6-219ENST00000476625 SMC4Q9NTJ3 1288 aa14.91□□□□□ -0.02
HDAC6-219ENST00000476625 DENND2AQ9ULE3 1009 aa14.91□□□□□ -0.02
HDAC6-219ENST00000476625 FRMPD3Q5JV73 1810 aa14.9□□□□□ -0.02
HDAC6-219ENST00000476625 FOCADQ5VW36 1801 aa14.9□□□□□ -0.02
HDAC6-219ENST00000476625 ENTPD3O75355 529 aa14.9□□□□□ -0.02
HDAC6-219ENST00000476625 CIAO1O76071 339 aa14.9□□□□□ -0.02
HDAC6-219ENST00000476625 TFRCP02786 760 aaKnown RBP14.9□□□□□ -0.02
HDAC6-219ENST00000476625 RHBDL3P58872 404 aa14.9□□□□□ -0.02
HDAC6-219ENST00000476625 MECOMQ03112 1051 aa14.9□□□□□ -0.02
HDAC6-219ENST00000476625 SLFN5Q08AF3 891 aa14.9□□□□□ -0.02
HDAC6-219ENST00000476625 SMCR8Q8TEV9 937 aaPredicted RBP14.9□□□□□ -0.02
HDAC6-219ENST00000476625 PAWRQ96IZ0 340 aaKnown RBP14.9□□□□□ -0.02
HDAC6-219ENST00000476625 NOB1Q9ULX3 412 aaKnown RBP14.9□□□□□ -0.02
HDAC6-219ENST00000476625 TNNQ9UQP3 1299 aa14.9□□□□□ -0.02
HDAC6-219ENST00000476625 MAST2Q6P0Q8 1798 aa14.9□□□□□ -0.02
HDAC6-219ENST00000476625 MROH7-TTC4A0A0A0MT08 1334 aa14.9□□□□□ -0.02
HDAC6-219ENST00000476625 MAP3K10Q02779 954 aa14.89□□□□□ -0.03
HDAC6-219ENST00000476625 TFCP2Q12800 502 aa14.89□□□□□ -0.03
HDAC6-219ENST00000476625 FASTKD5Q7L8L6 764 aaKnown RBP14.89□□□□□ -0.03
HDAC6-219ENST00000476625 PAK6Q9NQU5 681 aaPredicted RBP14.89□□□□□ -0.03
HDAC6-219ENST00000476625 GNL3LQ9NVN8 582 aaKnown RBP14.89□□□□□ -0.03
HDAC6-219ENST00000476625 ZMYND8Q9ULU4 1186 aaPredicted RBP14.89□□□□□ -0.03
HDAC6-219ENST00000476625 AGTPBP1Q9UPW5 1226 aa14.89□□□□□ -0.03
HDAC6-219ENST00000476625 A0A1B0GUL7 405 aa14.88□□□□□ -0.03
HDAC6-219ENST00000476625 EVI5O60447 810 aa14.88□□□□□ -0.03
HDAC6-219ENST00000476625 SYN1P17600 705 aa14.88□□□□□ -0.03
HDAC6-219ENST00000476625 IL15P40933 162 aaPredicted RBP14.88□□□□□ -0.03
HDAC6-219ENST00000476625 JAG1P78504 1218 aa14.88□□□□□ -0.03
HDAC6-219ENST00000476625 C7orf61Q8IZ16 206 aa14.88□□□□□ -0.03
HDAC6-219ENST00000476625 XAGE2Q96GT9 111 aa14.88□□□□□ -0.03
HDAC6-219ENST00000476625 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.88□□□□□ -0.03
HDAC6-219ENST00000476625 RANBP2P49792 3224 aaKnown RBP14.88□□□□□ -0.03
HDAC6-219ENST00000476625 E9PSI1 815 aa14.87□□□□□ -0.03
HDAC6-219ENST00000476625 CTNND1O60716 968 aaKnown RBP14.87□□□□□ -0.03
HDAC6-219ENST00000476625 HMGCS2P54868 508 aa14.87□□□□□ -0.03
HDAC6-219ENST00000476625 SPP2Q13103 211 aa14.87□□□□□ -0.03
HDAC6-219ENST00000476625 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms