RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 HPSEQ9Y251 543 aa9.65□□□□□ -0.86
VAPB-205ENST00000476395 NUP98P52948 1817 aa9.65□□□□□ -0.86
VAPB-205ENST00000476395 BIN1O00499 593 aa9.65□□□□□ -0.86
VAPB-205ENST00000476395 PHACTR2O75167 634 aa9.65□□□□□ -0.86
VAPB-205ENST00000476395 TATP17735 454 aaPredicted RBP9.65□□□□□ -0.86
VAPB-205ENST00000476395 PTPAQ15257 358 aa9.65□□□□□ -0.86
VAPB-205ENST00000476395 ATL3Q6DD88 541 aa9.65□□□□□ -0.86
VAPB-205ENST00000476395 RAB11FIP4Q86YS3 637 aa9.65□□□□□ -0.86
VAPB-205ENST00000476395 TMEM139Q8IV31 216 aa9.65□□□□□ -0.86
VAPB-205ENST00000476395 FOXP4Q8IVH2 680 aaPredicted RBP9.65□□□□□ -0.86
VAPB-205ENST00000476395 DPF2Q92785 391 aa9.65□□□□□ -0.86
VAPB-205ENST00000476395 ISCA1Q9BUE6 129 aa9.65□□□□□ -0.86
VAPB-205ENST00000476395 KIAA1468Q9P260 1216 aa9.65□□□□□ -0.86
VAPB-205ENST00000476395 MNS1Q8NEH6 495 aa9.65□□□□□ -0.87
VAPB-205ENST00000476395 IFNKQ9P0W0 207 aa9.65□□□□□ -0.87
VAPB-205ENST00000476395 SH3BP1Q9Y3L3 701 aa9.65□□□□□ -0.87
VAPB-205ENST00000476395 CTAGE5O15320 804 aa9.64□□□□□ -0.87
VAPB-205ENST00000476395 CDC27P30260 824 aa9.64□□□□□ -0.87
VAPB-205ENST00000476395 IL15P40933 162 aaPredicted RBP9.64□□□□□ -0.87
VAPB-205ENST00000476395 HAND2P61296 217 aa9.64□□□□□ -0.87
VAPB-205ENST00000476395 KIF23Q02241 960 aaPredicted RBP9.64□□□□□ -0.87
VAPB-205ENST00000476395 TRIM65Q6PJ69 517 aa9.64□□□□□ -0.87
VAPB-205ENST00000476395 CYB5R4Q7L1T6 521 aa9.64□□□□□ -0.87
VAPB-205ENST00000476395 VGLL2Q8N8G2 317 aa9.64□□□□□ -0.87
VAPB-205ENST00000476395 MED15Q96RN5 788 aa9.64□□□□□ -0.87
VAPB-205ENST00000476395 VPS18Q9P253 973 aa9.64□□□□□ -0.87
VAPB-205ENST00000476395 FAM237AA0A1B0GTK4 181 aa9.64□□□□□ -0.87
VAPB-205ENST00000476395 COL5A2P05997 1499 aaPredicted RBP9.64□□□□□ -0.87
VAPB-205ENST00000476395 ATP1A3P13637 1013 aa9.64□□□□□ -0.87
VAPB-205ENST00000476395 NTRK3Q16288 839 aa9.64□□□□□ -0.87
VAPB-205ENST00000476395 PLCH1Q4KWH8 1693 aa9.64□□□□□ -0.87
VAPB-205ENST00000476395 MYSM1Q5VVJ2 828 aa9.64□□□□□ -0.87
VAPB-205ENST00000476395 SHC4Q6S5L8 630 aa9.64□□□□□ -0.87
VAPB-205ENST00000476395 TBC1D10CQ8IV04 446 aa9.64□□□□□ -0.87
VAPB-205ENST00000476395 MRPS27Q92552 414 aaKnown RBP9.64□□□□□ -0.87
VAPB-205ENST00000476395 NEUROD6Q96NK8 337 aa9.64□□□□□ -0.87
VAPB-205ENST00000476395 MCM6Q14566 821 aa9.64□□□□□ -0.87
VAPB-205ENST00000476395 TMTC2Q8N394 836 aa9.64□□□□□ -0.87
VAPB-205ENST00000476395 SHISA4Q96DD7 197 aa9.64□□□□□ -0.87
VAPB-205ENST00000476395 WDR24Q96S15 920 aa9.64□□□□□ -0.87
VAPB-205ENST00000476395 FUT8Q9BYC5 575 aa9.64□□□□□ -0.87
VAPB-205ENST00000476395 YY1AP1Q9H869 796 aa9.64□□□□□ -0.87
VAPB-205ENST00000476395 PARP3Q9Y6F1 533 aa9.64□□□□□ -0.87
VAPB-205ENST00000476395 RANBP6O60518 1105 aaKnown RBP9.63□□□□□ -0.87
VAPB-205ENST00000476395 POLR3DP05423 398 aaPredicted RBP9.63□□□□□ -0.87
VAPB-205ENST00000476395 GUCY2CP25092 1073 aa9.63□□□□□ -0.87
VAPB-205ENST00000476395 NKX1-1Q15270 411 aaPredicted RBP9.63□□□□□ -0.87
VAPB-205ENST00000476395 HSP90AA4PQ58FG1 418 aa9.63□□□□□ -0.87
VAPB-205ENST00000476395 XAGE2Q96GT9 111 aa9.63□□□□□ -0.87
VAPB-205ENST00000476395 PDE11AQ9HCR9 933 aa9.63□□□□□ -0.87
VAPB-205ENST00000476395 CWC25Q9NXE8 425 aaPredicted RBP9.63□□□□□ -0.87
VAPB-205ENST00000476395 TUBE1Q9UJT0 475 aa9.63□□□□□ -0.87
VAPB-205ENST00000476395 EIF3CLB5ME19 914 aaKnown RBP9.63□□□□□ -0.87
VAPB-205ENST00000476395 CSF1RP07333 972 aa9.63□□□□□ -0.87
VAPB-205ENST00000476395 IFIT1P09914 478 aaKnown RBP9.63□□□□□ -0.87
VAPB-205ENST00000476395 MCAMP43121 646 aa9.63□□□□□ -0.87
VAPB-205ENST00000476395 ZAP70P43403 619 aa9.63□□□□□ -0.87
VAPB-205ENST00000476395 SEMA3FQ13275 785 aa9.63□□□□□ -0.87
VAPB-205ENST00000476395 DNAJC21Q5F1R6 531 aaKnown RBP9.63□□□□□ -0.87
VAPB-205ENST00000476395 CREBRFQ8IUR6 639 aa9.63□□□□□ -0.87
VAPB-205ENST00000476395 EGFL6Q8IUX8 553 aa9.63□□□□□ -0.87
VAPB-205ENST00000476395 FAM212AQ96EL1 285 aa9.63□□□□□ -0.87
VAPB-205ENST00000476395 EIF3CQ99613 913 aaKnown RBP9.63□□□□□ -0.87
VAPB-205ENST00000476395 PARD6BQ9BYG5 372 aa9.63□□□□□ -0.87
VAPB-205ENST00000476395 ZBTB3Q9H5J0 574 aa9.63□□□□□ -0.87
VAPB-205ENST00000476395 INCENPQ9NQS7 918 aa9.63□□□□□ -0.87
VAPB-205ENST00000476395 TCRBV5S4A2TA0A5A2 114 aa9.63□□□□□ -0.87
VAPB-205ENST00000476395 PFKFB1P16118 471 aa9.63□□□□□ -0.87
VAPB-205ENST00000476395 ME1P48163 572 aa9.63□□□□□ -0.87
VAPB-205ENST00000476395 ETF1P62495 437 aaKnown RBP9.63□□□□□ -0.87
VAPB-205ENST00000476395 MDM2Q00987 491 aaPredicted RBP9.63□□□□□ -0.87
VAPB-205ENST00000476395 TTC31Q49AM3 519 aaPredicted RBP9.63□□□□□ -0.87
VAPB-205ENST00000476395 GOLGA5Q8TBA6 731 aa9.63□□□□□ -0.87
VAPB-205ENST00000476395 ACTN2P35609 894 aa9.62□□□□□ -0.87
VAPB-205ENST00000476395 NCAPGQ9BPX3 1015 aa9.62□□□□□ -0.87
VAPB-205ENST00000476395 UTP14AQ9BVJ6 771 aaKnown RBP9.62□□□□□ -0.87
VAPB-205ENST00000476395 IRX2Q9BZI1 471 aaPredicted RBP9.62□□□□□ -0.87
VAPB-205ENST00000476395 SEC31BQ9NQW1 1179 aa9.62□□□□□ -0.87
VAPB-205ENST00000476395 ANO10Q9NW15 660 aa9.62□□□□□ -0.87
VAPB-205ENST00000476395 ARGLU1Q9NWB6 273 aaPredicted RBP9.62□□□□□ -0.87
VAPB-205ENST00000476395 PHLPP1O60346 1717 aa9.62□□□□□ -0.87
VAPB-205ENST00000476395 PRC1O43663 620 aa9.62□□□□□ -0.87
VAPB-205ENST00000476395 ZNF202O95125 648 aa9.62□□□□□ -0.87
VAPB-205ENST00000476395 YEATS4O95619 227 aa9.62□□□□□ -0.87
VAPB-205ENST00000476395 PDE4BQ07343 736 aa9.62□□□□□ -0.87
VAPB-205ENST00000476395 TTC5Q8N0Z6 440 aa9.62□□□□□ -0.87
VAPB-205ENST00000476395 MTMR7Q9Y216 660 aa9.62□□□□□ -0.87
VAPB-205ENST00000476395 RIPOR2Q9Y4F9 1068 aa9.62□□□□□ -0.87
VAPB-205ENST00000476395 SPATA31A3Q5VYP0 1347 aa9.62□□□□□ -0.87
VAPB-205ENST00000476395 A0A0U1RQJ8 604 aa9.62□□□□□ -0.87
VAPB-205ENST00000476395 SFPQP23246 707 aaKnown RBP eCLIP9.62□□□□□ -0.87
VAPB-205ENST00000476395 CABP4P57796 275 aa9.62□□□□□ -0.87
VAPB-205ENST00000476395 METTL16Q86W50 562 aaKnown RBP9.62□□□□□ -0.87
VAPB-205ENST00000476395 ATRIPQ8WXE1 791 aa9.62□□□□□ -0.87
VAPB-205ENST00000476395 RABEP2Q9H5N1 569 aa9.62□□□□□ -0.87
VAPB-205ENST00000476395 DLEC1Q9Y238 1755 aa9.61□□□□□ -0.87
VAPB-205ENST00000476395 NEMFO60524 1076 aa9.61□□□□□ -0.87
VAPB-205ENST00000476395 LMOD1P29536 600 aaPredicted RBP9.61□□□□□ -0.87
VAPB-205ENST00000476395 MYCBPQ99417 103 aaPredicted RBP9.61□□□□□ -0.87
VAPB-205ENST00000476395 CARD10Q9BWT7 1032 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms