RNA–Protein interactions for RNA: ENST00000476086.6

NR1H3-219, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-219ENST00000476086 ZNF213O14771 459 aa22.6■■□□□ 1.21
NR1H3-219ENST00000476086 RBM25P49756 843 aaKnown RBP22.6■■□□□ 1.21
NR1H3-219ENST00000476086 TNFAIP1Q13829 316 aa22.6■■□□□ 1.21
NR1H3-219ENST00000476086 MAPKAPK5Q8IW41 473 aa22.6■■□□□ 1.21
NR1H3-219ENST00000476086 TBC1D32Q96NH3 1257 aa22.6■■□□□ 1.21
NR1H3-219ENST00000476086 MCM9Q9NXL9 1143 aa22.6■■□□□ 1.21
NR1H3-219ENST00000476086 DDX60LQ5H9U9 1706 aaKnown RBP22.6■■□□□ 1.21
NR1H3-219ENST00000476086 ENTPD3O75355 529 aa22.59■■□□□ 1.21
NR1H3-219ENST00000476086 TNNI2P48788 182 aa22.59■■□□□ 1.21
NR1H3-219ENST00000476086 ANAPC15P60006 121 aa22.59■■□□□ 1.21
NR1H3-219ENST00000476086 PICALMQ13492 652 aa22.59■■□□□ 1.21
NR1H3-219ENST00000476086 NBPF9Q3BBW0 867 aa22.59■■□□□ 1.21
NR1H3-219ENST00000476086 SBK1Q52WX2 424 aa22.59■■□□□ 1.21
NR1H3-219ENST00000476086 CREB3L3Q68CJ9 461 aa22.59■■□□□ 1.21
NR1H3-219ENST00000476086 MKRN1Q9UHC7 482 aaKnown RBP22.59■■□□□ 1.21
NR1H3-219ENST00000476086 CLRN2A0PK11 232 aa22.58■■□□□ 1.21
NR1H3-219ENST00000476086 SLC27A2O14975 620 aa22.58■■□□□ 1.21
NR1H3-219ENST00000476086 POLR3DP05423 398 aaPredicted RBP22.58■■□□□ 1.21
NR1H3-219ENST00000476086 SLC3A2P08195 630 aaKnown RBP22.58■■□□□ 1.21
NR1H3-219ENST00000476086 KRT32Q14532 448 aa22.58■■□□□ 1.21
NR1H3-219ENST00000476086 USP50Q70EL3 339 aaPredicted RBP22.58■■□□□ 1.21
NR1H3-219ENST00000476086 DHX36Q9H2U1 1008 aaKnown RBP22.58■■□□□ 1.21
NR1H3-219ENST00000476086 USP17L12C9JPN9 530 aa22.57■■□□□ 1.2
NR1H3-219ENST00000476086 USP17L21D6R901 530 aa22.57■■□□□ 1.2
NR1H3-219ENST00000476086 EPHX2P34913 555 aa22.57■■□□□ 1.2
NR1H3-219ENST00000476086 CTR9Q6PD62 1173 aa22.57■■□□□ 1.2
NR1H3-219ENST00000476086 TTC6Q86TZ1 520 aa22.57■■□□□ 1.2
NR1H3-219ENST00000476086 FAM83AQ86UY5 434 aa22.57■■□□□ 1.2
NR1H3-219ENST00000476086 APOBEC3FQ8IUX4 373 aaKnown RBP22.57■■□□□ 1.2
NR1H3-219ENST00000476086 OSBPL5Q9H0X9 879 aaPredicted RBP22.57■■□□□ 1.2
NR1H3-219ENST00000476086 VEZTQ9HBM0 779 aa22.57■■□□□ 1.2
NR1H3-219ENST00000476086 COL2A1P02458 1487 aaPredicted RBP22.57■■□□□ 1.2
NR1H3-219ENST00000476086 MINDY4BA8MYZ0 360 aa22.56■■□□□ 1.2
NR1H3-219ENST00000476086 EGFRP00533 1210 aa22.56■■□□□ 1.2
NR1H3-219ENST00000476086 TSGA10IPQ3SY00 556 aa22.56■■□□□ 1.2
NR1H3-219ENST00000476086 PNMA8AQ86V59 439 aaPredicted RBP22.56■■□□□ 1.2
NR1H3-219ENST00000476086 TRPM4Q8TD43 1214 aa22.56■■□□□ 1.2
NR1H3-219ENST00000476086 KCNB2Q92953 911 aa22.56■■□□□ 1.2
NR1H3-219ENST00000476086 DDX4Q9NQI0 724 aaKnown RBP22.56■■□□□ 1.2
NR1H3-219ENST00000476086 ANAPC4Q9UJX5 808 aa22.56■■□□□ 1.2
NR1H3-219ENST00000476086 HLA-DOAP06340 250 aa22.55■■□□□ 1.2
NR1H3-219ENST00000476086 CYP21A2P08686 494 aa22.55■■□□□ 1.2
NR1H3-219ENST00000476086 CACNB3P54284 484 aa22.55■■□□□ 1.2
NR1H3-219ENST00000476086 PPARAQ07869 468 aa22.55■■□□□ 1.2
NR1H3-219ENST00000476086 NFIAQ12857 509 aa22.55■■□□□ 1.2
NR1H3-219ENST00000476086 FAM151AQ8WW52 585 aa22.55■■□□□ 1.2
NR1H3-219ENST00000476086 RNF41Q9H4P4 317 aaPredicted RBP22.55■■□□□ 1.2
NR1H3-219ENST00000476086 FAM198AQ9UFP1 575 aa22.55■■□□□ 1.2
NR1H3-219ENST00000476086 TAOK2Q9UL54 1235 aa22.55■■□□□ 1.2
NR1H3-219ENST00000476086 PITPNM2Q9BZ72 1349 aa22.55■■□□□ 1.2
NR1H3-219ENST00000476086 TCP10L2B9ZVM9 353 aa22.54■■□□□ 1.2
NR1H3-219ENST00000476086 PCP11498 1178 aaKnown RBP22.54■■□□□ 1.2
NR1H3-219ENST00000476086 TCP10Q12799 353 aa22.54■■□□□ 1.2
NR1H3-219ENST00000476086 C12orf60Q5U649 245 aa22.54■■□□□ 1.2
NR1H3-219ENST00000476086 ZSCAN29Q8IWY8 852 aaPredicted RBP22.54■■□□□ 1.2
NR1H3-219ENST00000476086 ZC3H15Q8WU90 426 aaKnown RBP22.54■■□□□ 1.2
NR1H3-219ENST00000476086 ZNF287Q9HBT7 754 aa22.54■■□□□ 1.2
NR1H3-219ENST00000476086 SAP30BPQ9UHR5 308 aaKnown RBP22.54■■□□□ 1.2
NR1H3-219ENST00000476086 VEGFAP15692 232 aaPredicted RBP22.53■■□□□ 1.2
NR1H3-219ENST00000476086 PSMA5P28066 241 aa22.53■■□□□ 1.2
NR1H3-219ENST00000476086 HAND2P61296 217 aa22.53■■□□□ 1.2
NR1H3-219ENST00000476086 IL27Q8NEV9 243 aa22.53■■□□□ 1.2
NR1H3-219ENST00000476086 TAF1DQ9H5J8 278 aaPredicted RBP22.53■■□□□ 1.2
NR1H3-219ENST00000476086 PALD1Q9ULE6 856 aa22.53■■□□□ 1.2
NR1H3-219ENST00000476086 SNX14Q9Y5W7 946 aa22.53■■□□□ 1.2
NR1H3-219ENST00000476086 ATRNL1Q5VV63 1379 aa22.52■■□□□ 1.2
NR1H3-219ENST00000476086 HIRAP54198 1017 aaPredicted RBP22.52■■□□□ 1.2
NR1H3-219ENST00000476086 TRDNQ13061 729 aa22.52■■□□□ 1.2
NR1H3-219ENST00000476086 ANGEL2Q5VTE6 544 aaKnown RBP22.52■■□□□ 1.2
NR1H3-219ENST00000476086 CNNM2Q9H8M5 875 aa22.52■■□□□ 1.2
NR1H3-219ENST00000476086 GGA3Q9NZ52 723 aa22.52■■□□□ 1.2
NR1H3-219ENST00000476086 MYH8P13535 1937 aa22.52■■□□□ 1.2
NR1H3-219ENST00000476086 UTRNP46939 3433 aa22.52■■□□□ 1.2
NR1H3-219ENST00000476086 ROBO3Q96MS0 1386 aa22.51■■□□□ 1.19
NR1H3-219ENST00000476086 POLR2AP24928 1970 aaKnown RBP22.51■■□□□ 1.19
NR1H3-219ENST00000476086 NT5C2P49902 561 aa22.51■■□□□ 1.19
NR1H3-219ENST00000476086 PDE4BQ07343 736 aa22.51■■□□□ 1.19
NR1H3-219ENST00000476086 AKNAD1Q5T1N1 836 aa22.51■■□□□ 1.19
NR1H3-219ENST00000476086 MFSD6Q6ZSS7 791 aa22.51■■□□□ 1.19
NR1H3-219ENST00000476086 STAG1Q8WVM7 1258 aa22.51■■□□□ 1.19
NR1H3-219ENST00000476086 DCPSQ96C86 337 aaKnown RBP22.51■■□□□ 1.19
NR1H3-219ENST00000476086 IL17RAQ96F46 866 aa22.51■■□□□ 1.19
NR1H3-219ENST00000476086 PI4KBQ9UBF8 816 aa22.51■■□□□ 1.19
NR1H3-219ENST00000476086 PPP2R3BQ9Y5P8 575 aa22.51■■□□□ 1.19
NR1H3-219ENST00000476086 HMGB1P09429 215 aaKnown RBP22.5■■□□□ 1.19
NR1H3-219ENST00000476086 RASEFQ8IZ41 740 aa22.5■■□□□ 1.19
NR1H3-219ENST00000476086 HOOK2Q96ED9 719 aa22.5■■□□□ 1.19
NR1H3-219ENST00000476086 EHD4Q9H223 541 aa22.5■■□□□ 1.19
NR1H3-219ENST00000476086 CNTNAP1P78357 1384 aa22.5■■□□□ 1.19
NR1H3-219ENST00000476086 CYP2D7A0A087X1C5 515 aa22.49■■□□□ 1.19
NR1H3-219ENST00000476086 POTECB2RU33 542 aa22.49■■□□□ 1.19
NR1H3-219ENST00000476086 E7EWF7 191 aa22.49■■□□□ 1.19
NR1H3-219ENST00000476086 CTDSPL2Q05D32 466 aa22.49■■□□□ 1.19
NR1H3-219ENST00000476086 RASA3Q14644 834 aa22.49■■□□□ 1.19
NR1H3-219ENST00000476086 RALYLQ86SE5 291 aaKnown RBP22.49■■□□□ 1.19
NR1H3-219ENST00000476086 FOXP4Q8IVH2 680 aaPredicted RBP22.49■■□□□ 1.19
NR1H3-219ENST00000476086 NCOA7Q8NI08 942 aa22.49■■□□□ 1.19
NR1H3-219ENST00000476086 TRIM34Q9BYJ4 488 aa22.49■■□□□ 1.19
NR1H3-219ENST00000476086 TM6SF1Q9BZW5 370 aa22.49■■□□□ 1.19
NR1H3-219ENST00000476086 KRT23Q9C075 422 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms