RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 NFE2L3Q9Y4A8 694 aa10.9□□□□□ -0.66
CDH23-211ENST00000475158 KDRP35968 1356 aa10.9□□□□□ -0.66
CDH23-211ENST00000475158 AATKQ6ZMQ8 1374 aa10.9□□□□□ -0.66
CDH23-211ENST00000475158 BTBD18B2RXH4 712 aa10.9□□□□□ -0.66
CDH23-211ENST00000475158 GNAQP50148 359 aa10.9□□□□□ -0.66
CDH23-211ENST00000475158 GSTO1P78417 241 aa10.9□□□□□ -0.66
CDH23-211ENST00000475158 TCP10Q12799 353 aa10.9□□□□□ -0.66
CDH23-211ENST00000475158 TTLL12Q14166 644 aaPredicted RBP10.9□□□□□ -0.66
CDH23-211ENST00000475158 MYSM1Q5VVJ2 828 aa10.9□□□□□ -0.66
CDH23-211ENST00000475158 IQCEQ6IPM2 695 aa10.9□□□□□ -0.66
CDH23-211ENST00000475158 PAF1Q8N7H5 531 aa10.9□□□□□ -0.66
CDH23-211ENST00000475158 GJB4Q9NTQ9 266 aa10.9□□□□□ -0.66
CDH23-211ENST00000475158 STAP2Q9UGK3 403 aa10.9□□□□□ -0.66
CDH23-211ENST00000475158 SLU7O95391 586 aaKnown RBP10.9□□□□□ -0.66
CDH23-211ENST00000475158 ZNF569Q5MCW4 686 aa10.9□□□□□ -0.66
CDH23-211ENST00000475158 TRAPPC3LQ5T215 181 aa10.9□□□□□ -0.66
CDH23-211ENST00000475158 FCHSD1Q86WN1 690 aa10.9□□□□□ -0.66
CDH23-211ENST00000475158 MAP4K1Q92918 833 aa10.9□□□□□ -0.66
CDH23-211ENST00000475158 TMEM87BQ96K49 555 aa10.9□□□□□ -0.66
CDH23-211ENST00000475158 SEC31BQ9NQW1 1179 aa10.9□□□□□ -0.66
CDH23-211ENST00000475158 LMTK3Q96Q04 1460 aa10.9□□□□□ -0.66
CDH23-211ENST00000475158 SYNMO15061 1565 aa10.9□□□□□ -0.67
CDH23-211ENST00000475158 FGFR1OPO95684 399 aaKnown RBP10.9□□□□□ -0.67
CDH23-211ENST00000475158 SCRN1Q12765 414 aa10.9□□□□□ -0.67
CDH23-211ENST00000475158 PNOCQ13519 176 aa10.9□□□□□ -0.67
CDH23-211ENST00000475158 TNIP1Q15025 636 aa10.9□□□□□ -0.67
CDH23-211ENST00000475158 VPS36Q86VN1 386 aa10.9□□□□□ -0.67
CDH23-211ENST00000475158 SCLT1Q96NL6 688 aa10.9□□□□□ -0.67
CDH23-211ENST00000475158 BLZF1Q9H2G9 400 aa10.9□□□□□ -0.67
CDH23-211ENST00000475158 ELP1O95163 1332 aa10.89□□□□□ -0.67
CDH23-211ENST00000475158 ZFYVE16Q7Z3T8 1539 aa10.89□□□□□ -0.67
CDH23-211ENST00000475158 CALML3P27482 149 aa10.89□□□□□ -0.67
CDH23-211ENST00000475158 TXKP42681 527 aa10.89□□□□□ -0.67
CDH23-211ENST00000475158 ZNF75DP51815 510 aa10.89□□□□□ -0.67
CDH23-211ENST00000475158 CTSWP56202 376 aa10.89□□□□□ -0.67
CDH23-211ENST00000475158 FANCCQ00597 558 aa10.89□□□□□ -0.67
CDH23-211ENST00000475158 RILPL1Q5EBL4 403 aa10.89□□□□□ -0.67
CDH23-211ENST00000475158 C6orf50Q9HD87 102 aa10.89□□□□□ -0.67
CDH23-211ENST00000475158 COPRSQ9NQ92 184 aa10.89□□□□□ -0.67
CDH23-211ENST00000475158 ERBB3P21860 1342 aa10.89□□□□□ -0.67
CDH23-211ENST00000475158 TBCAO75347 108 aaKnown RBP10.89□□□□□ -0.67
CDH23-211ENST00000475158 CCDC175P0C221 793 aa10.89□□□□□ -0.67
CDH23-211ENST00000475158 HAUS7Q99871 368 aa10.89□□□□□ -0.67
CDH23-211ENST00000475158 NYXQ9GZU5 481 aa10.89□□□□□ -0.67
CDH23-211ENST00000475158 PRDM4Q9UKN5 801 aa10.89□□□□□ -0.67
CDH23-211ENST00000475158 COBLO75128 1261 aa10.89□□□□□ -0.67
CDH23-211ENST00000475158 DEXIO95424 95 aa10.89□□□□□ -0.67
CDH23-211ENST00000475158 BMP15O95972 392 aa10.89□□□□□ -0.67
CDH23-211ENST00000475158 TFAP4Q01664 338 aa10.89□□□□□ -0.67
CDH23-211ENST00000475158 KRT79Q5XKE5 535 aa10.89□□□□□ -0.67
CDH23-211ENST00000475158 TGFBRAP1Q8WUH2 860 aa10.89□□□□□ -0.67
CDH23-211ENST00000475158 OSBPL3Q9H4L5 887 aa10.89□□□□□ -0.67
CDH23-211ENST00000475158 DENND2AQ9ULE3 1009 aa10.89□□□□□ -0.67
CDH23-211ENST00000475158 CCDC91Q7Z6B0 441 aa10.88□□□□□ -0.67
CDH23-211ENST00000475158 RRP36Q96EU6 259 aaKnown RBP10.88□□□□□ -0.67
CDH23-211ENST00000475158 AIFM3Q96NN9 605 aa10.88□□□□□ -0.67
CDH23-211ENST00000475158 LLPHQ9BRT6 129 aaKnown RBP10.88□□□□□ -0.67
CDH23-211ENST00000475158 GBP3Q9H0R5 595 aa10.88□□□□□ -0.67
CDH23-211ENST00000475158 RMND1Q9NWS8 449 aa10.88□□□□□ -0.67
CDH23-211ENST00000475158 CTNND2Q9UQB3 1225 aa10.88□□□□□ -0.67
CDH23-211ENST00000475158 PTPN12Q05209 780 aaKnown RBP10.88□□□□□ -0.67
CDH23-211ENST00000475158 OGFOD1Q8N543 542 aa10.88□□□□□ -0.67
CDH23-211ENST00000475158 SMARCC2Q8TAQ2 1214 aa10.88□□□□□ -0.67
CDH23-211ENST00000475158 MYCBPQ99417 103 aaPredicted RBP10.88□□□□□ -0.67
CDH23-211ENST00000475158 XPO4Q9C0E2 1151 aaKnown RBP10.88□□□□□ -0.67
CDH23-211ENST00000475158 NRBP1Q9UHY1 535 aa10.88□□□□□ -0.67
CDH23-211ENST00000475158 CDC42BPAQ5VT25 1732 aa10.88□□□□□ -0.67
CDH23-211ENST00000475158 GSTTP1A0A1W2PQM5 241 aa10.88□□□□□ -0.67
CDH23-211ENST00000475158 RNASE9P60153 205 aaKnown RBP10.88□□□□□ -0.67
CDH23-211ENST00000475158 PARP10Q53GL7 1025 aa10.88□□□□□ -0.67
CDH23-211ENST00000475158 EFCAB6Q5THR3 1501 aa10.88□□□□□ -0.67
CDH23-211ENST00000475158 FNBP4Q8N3X1 1017 aaPredicted RBP10.88□□□□□ -0.67
CDH23-211ENST00000475158 RTL9Q8NET4 1388 aa10.88□□□□□ -0.67
CDH23-211ENST00000475158 NEK11Q8NG66 645 aa10.88□□□□□ -0.67
CDH23-211ENST00000475158 CCDC42Q96M95 316 aa10.88□□□□□ -0.67
CDH23-211ENST00000475158 PSMB7Q99436 277 aa10.88□□□□□ -0.67
CDH23-211ENST00000475158 BAG1Q99933 345 aaPredicted RBP10.88□□□□□ -0.67
CDH23-211ENST00000475158 ARFGAP3Q9NP61 516 aa10.88□□□□□ -0.67
CDH23-211ENST00000475158 GOLGA8HP0CJ92 632 aa10.87□□□□□ -0.67
CDH23-211ENST00000475158 RPS8P62241 208 aaKnown RBP10.87□□□□□ -0.67
CDH23-211ENST00000475158 DYMQ7RTS9 669 aa10.87□□□□□ -0.67
CDH23-211ENST00000475158 IFNL3Q8IZI9 196 aa10.87□□□□□ -0.67
CDH23-211ENST00000475158 IGSF22Q8N9C0 903 aa10.87□□□□□ -0.67
CDH23-211ENST00000475158 DSCC1Q9BVC3 393 aa10.87□□□□□ -0.67
CDH23-211ENST00000475158 PREX2Q70Z35 1606 aa10.87□□□□□ -0.67
CDH23-211ENST00000475158 PDIA3P30101 505 aaKnown RBP10.87□□□□□ -0.67
CDH23-211ENST00000475158 IFFO1Q0D2I5 559 aa10.87□□□□□ -0.67
CDH23-211ENST00000475158 DNAJC21Q5F1R6 531 aaKnown RBP10.87□□□□□ -0.67
CDH23-211ENST00000475158 RNF187Q5TA31 235 aaPredicted RBP10.87□□□□□ -0.67
CDH23-211ENST00000475158 ZNF654Q8IZM8 581 aa10.87□□□□□ -0.67
CDH23-211ENST00000475158 PI4K2BQ8TCG2 481 aa10.87□□□□□ -0.67
CDH23-211ENST00000475158 ERVV-2B6SEH9 535 aa10.87□□□□□ -0.67
CDH23-211ENST00000475158 CYP27B1O15528 508 aa10.87□□□□□ -0.67
CDH23-211ENST00000475158 CHGBP05060 677 aa10.87□□□□□ -0.67
CDH23-211ENST00000475158 SPAG1Q07617 926 aa10.87□□□□□ -0.67
CDH23-211ENST00000475158 ZBTB38Q8NAP3 1195 aaPredicted RBP10.87□□□□□ -0.67
CDH23-211ENST00000475158 RGS22Q8NE09 1264 aa10.87□□□□□ -0.67
CDH23-211ENST00000475158 OSBP2Q969R2 916 aa10.87□□□□□ -0.67
CDH23-211ENST00000475158 TBC1D7Q9P0N9 293 aa10.87□□□□□ -0.67
CDH23-211ENST00000475158 SERTAD1Q9UHV2 236 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms