RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 KRT72Q14CN4 511 aa5.64□□□□□ -1.51
NPHP3-206ENST00000474871 DPY19L2Q6NUT2 758 aa5.64□□□□□ -1.51
NPHP3-206ENST00000474871 CEP68Q76N32 757 aa5.64□□□□□ -1.51
NPHP3-206ENST00000474871 DEF6Q9H4E7 631 aa5.64□□□□□ -1.51
NPHP3-206ENST00000474871 SPTLC3Q9NUV7 552 aa5.64□□□□□ -1.51
NPHP3-206ENST00000474871 IVNS1ABPQ9Y6Y0 642 aa5.64□□□□□ -1.51
NPHP3-206ENST00000474871 V9GYY5 206 aaPredicted RBP5.64□□□□□ -1.51
NPHP3-206ENST00000474871 MMS22LQ6ZRQ5 1243 aa5.64□□□□□ -1.51
NPHP3-206ENST00000474871 ADGRB1O14514 1584 aa5.63□□□□□ -1.51
NPHP3-206ENST00000474871 MYO5BQ9ULV0 1848 aa5.63□□□□□ -1.51
NPHP3-206ENST00000474871 CLASP2O75122 1294 aaKnown RBP5.63□□□□□ -1.51
NPHP3-206ENST00000474871 GUCY1B3Q02153 619 aa5.63□□□□□ -1.51
NPHP3-206ENST00000474871 REXO1L1PQ8IX06 675 aa5.63□□□□□ -1.51
NPHP3-206ENST00000474871 ABTB2Q8N961 1025 aa5.63□□□□□ -1.51
NPHP3-206ENST00000474871 TTLL3Q9Y4R7 772 aa5.63□□□□□ -1.51
NPHP3-206ENST00000474871 KDM5AP29375 1690 aaKnown RBP5.63□□□□□ -1.51
NPHP3-206ENST00000474871 EIF3AQ14152 1382 aaKnown RBP5.63□□□□□ -1.51
NPHP3-206ENST00000474871 LINC00854A0A1B0GVQ3 168 aa5.63□□□□□ -1.51
NPHP3-206ENST00000474871 POLD2P49005 469 aa5.63□□□□□ -1.51
NPHP3-206ENST00000474871 CLCN2P51788 898 aa5.63□□□□□ -1.51
NPHP3-206ENST00000474871 HSD17B7P56937 341 aa5.63□□□□□ -1.51
NPHP3-206ENST00000474871 UBXN2AP68543 259 aa5.63□□□□□ -1.51
NPHP3-206ENST00000474871 LMBRD2Q68DH5 695 aaPredicted RBP5.63□□□□□ -1.51
NPHP3-206ENST00000474871 SDE2Q6IQ49 451 aa5.63□□□□□ -1.51
NPHP3-206ENST00000474871 RTL10Q7L3V2 364 aa5.63□□□□□ -1.51
NPHP3-206ENST00000474871 LRRC49Q8IUZ0 686 aa5.63□□□□□ -1.51
NPHP3-206ENST00000474871 DHX38Q92620 1227 aaKnown RBP5.63□□□□□ -1.51
NPHP3-206ENST00000474871 SMG6Q86US8 1419 aaKnown RBP5.63□□□□□ -1.51
NPHP3-206ENST00000474871 PTPRCP08575 1304 aa5.63□□□□□ -1.51
NPHP3-206ENST00000474871 ADGRF5Q8IZF2 1346 aa5.63□□□□□ -1.51
NPHP3-206ENST00000474871 SPATA31D1Q6ZQQ2 1576 aa5.63□□□□□ -1.51
NPHP3-206ENST00000474871 ERVK-7P63135 1459 aa5.63□□□□□ -1.51
NPHP3-206ENST00000474871 MCM5P33992 734 aa5.63□□□□□ -1.51
NPHP3-206ENST00000474871 PEX5P50542 639 aa5.63□□□□□ -1.51
NPHP3-206ENST00000474871 SCNN1BP51168 640 aa5.63□□□□□ -1.51
NPHP3-206ENST00000474871 ZC3H6P61129 1189 aaKnown RBP5.63□□□□□ -1.51
NPHP3-206ENST00000474871 SGCDQ92629 289 aa5.63□□□□□ -1.51
NPHP3-206ENST00000474871 IFRD1O00458 451 aaPredicted RBP5.62□□□□□ -1.51
NPHP3-206ENST00000474871 SART1O43290 800 aaKnown RBP5.62□□□□□ -1.51
NPHP3-206ENST00000474871 TCF7P36402 384 aaPredicted RBP5.62□□□□□ -1.51
NPHP3-206ENST00000474871 PHEXP78562 749 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 TMED1Q13445 227 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 ESCO1Q5FWF5 840 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 JAZF1Q86VZ6 243 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 DNAAF2Q9NVR5 837 aaKnown RBP5.62□□□□□ -1.51
NPHP3-206ENST00000474871 QRICH2Q9H0J4 1663 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 KDM4FA0A1W2PPD8 638 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 STXBP3O00186 592 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 P4HA2O15460 535 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 ATP6V1G1O75348 118 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 KBTBD12Q3ZCT8 623 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 WLSQ5T9L3 541 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 LLGL2Q6P1M3 1020 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 MCM10Q7L590 875 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 BRSK2Q8IWQ3 736 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 GSDMBQ8TAX9 411 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 ZNF496Q96IT1 587 aaPredicted RBP5.62□□□□□ -1.51
NPHP3-206ENST00000474871 IWS1Q96ST2 819 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 GPR108Q9NPR9 543 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 GTF3C4Q9UKN8 822 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 E2F6O75461 281 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 NEBLO76041 1014 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 PDGFRBP09619 1106 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 CCT8P50990 548 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 KIAA2012Q0VF49 1180 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 CRY1Q16526 586 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 GNPTABQ3T906 1256 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 CCDC174Q6PII3 467 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 KIAA0825Q8IV33 1275 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 HELQQ8TDG4 1101 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 PIBF1Q8WXW3 757 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 SCLT1Q96NL6 688 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 OXCT2Q9BYC2 517 aaPredicted RBP5.62□□□□□ -1.51
NPHP3-206ENST00000474871 PLEKHA5Q9HAU0 1116 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 POLMQ9NP87 494 aaPredicted RBP5.62□□□□□ -1.51
NPHP3-206ENST00000474871 TCF7L2Q9NQB0 619 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 HDAC6Q9UBN7 1215 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 RRP15Q9Y3B9 282 aaKnown RBP5.62□□□□□ -1.51
NPHP3-206ENST00000474871 PABPN1LA6NDY0 278 aaKnown RBP5.62□□□□□ -1.51
NPHP3-206ENST00000474871 KCNJ13O60928 360 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 ZNF254O75437 659 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 HALP42357 657 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 ITIH3Q06033 890 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 ARHGEF18Q6ZSZ5 1173 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 NOP9Q86U38 636 aaKnown RBP5.62□□□□□ -1.51
NPHP3-206ENST00000474871 ARL6IP6Q8N6S5 226 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 OR8K1Q8NGG5 319 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 SNX21Q969T3 373 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 OSBPL10Q9BXB5 764 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 BRINP2Q9C0B6 783 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 DNAJC25Q9H1X3 360 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 EPB41L4AQ9HCS5 686 aaPredicted RBP5.62□□□□□ -1.51
NPHP3-206ENST00000474871 ZNF304Q9HCX3 659 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 HESX1Q9UBX0 185 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 SERPINA10Q9UK55 444 aa5.62□□□□□ -1.51
NPHP3-206ENST00000474871 HMGB1P1B2RPK0 211 aaPredicted RBP5.61□□□□□ -1.51
NPHP3-206ENST00000474871 H0Y3Z8 333 aa5.61□□□□□ -1.51
NPHP3-206ENST00000474871 AKR1B10O60218 316 aa5.61□□□□□ -1.51
NPHP3-206ENST00000474871 CA8P35219 290 aa5.61□□□□□ -1.51
NPHP3-206ENST00000474871 TGFB2P61812 414 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms