RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 NPHP1O15259 732 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 POSTNQ15063 836 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 NT5DC1Q5TFE4 455 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 PLA2G12BQ9BX93 195 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 HPS5Q9UPZ3 1129 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 DDX60Q8IY21 1712 aaKnown RBP6.99□□□□□ -1.29
HERC4-209ENST00000473533 ERVV-2B6SEH9 535 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 ATP5J2-PTCD1G3V325 749 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 GPAA1O43292 621 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 IGSF3O75054 1194 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 PTCD1O75127 700 aaKnown RBP6.99□□□□□ -1.29
HERC4-209ENST00000473533 PLA2G4AP47712 749 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 PLCD1P51178 756 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 TIMM10P62072 90 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 TRIM28Q13263 835 aaKnown RBP6.99□□□□□ -1.29
HERC4-209ENST00000473533 COL9A3Q14050 684 aaPredicted RBP6.99□□□□□ -1.29
HERC4-209ENST00000473533 MAP9Q49MG5 647 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 HSP90AB3PQ58FF7 597 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 SRGAP1Q7Z6B7 1085 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 OSBP2Q969R2 916 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 C4AP0C0L4 1744 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 C4BP0C0L5 1744 aa6.99□□□□□ -1.29
HERC4-209ENST00000473533 NEDD4P46934 1319 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 ERICH4A6NGS2 130 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 GNAT2P19087 354 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 PTPAQ15257 358 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 WHAMMP3Q1A5X7 153 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 RSRC2Q7L4I2 434 aaKnown RBP6.98□□□□□ -1.29
HERC4-209ENST00000473533 NOSTRINQ8IVI9 506 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 CCDC12Q8WUD4 166 aaPredicted RBP6.98□□□□□ -1.29
HERC4-209ENST00000473533 XAGE2Q96GT9 111 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 NACAP1Q9BZK3 213 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 FAM107BQ9H098 131 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 RNF41Q9H4P4 317 aaPredicted RBP6.98□□□□□ -1.29
HERC4-209ENST00000473533 BRMS1Q9HCU9 246 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 SLC12A7Q9Y666 1083 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 PCDH11XQ9BZA7 1347 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 PCDH11YQ9BZA8 1340 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 MYH7P12883 1935 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 VWA3AA6NCI4 1184 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 FMNL1O95466 1100 aaPredicted RBP6.98□□□□□ -1.29
HERC4-209ENST00000473533 OAS2P29728 719 aaKnown RBP6.98□□□□□ -1.29
HERC4-209ENST00000473533 MARCKSP29966 332 aaPredicted RBP6.98□□□□□ -1.29
HERC4-209ENST00000473533 CHMP4BP1P59074 171 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 SEMA3FQ13275 785 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 IFIT5Q13325 482 aaKnown RBP6.98□□□□□ -1.29
HERC4-209ENST00000473533 APOA5Q6Q788 366 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.98□□□□□ -1.29
HERC4-209ENST00000473533 UBXN6Q9BZV1 441 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 FANCLQ9NW38 375 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 NUP188Q5SRE5 1749 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 ITIH6Q6UXX5 1313 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.98□□□□□ -1.29
HERC4-209ENST00000473533 CTAGE9A4FU28 777 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 TULP2O00295 520 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 DEXIO95424 95 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 IFNAR1P17181 557 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 AKAP17AQ02040 695 aaKnown RBP6.98□□□□□ -1.29
HERC4-209ENST00000473533 PNOCQ13519 176 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 SHC4Q6S5L8 630 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 KIF6Q6ZMV9 814 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 CHST3Q7LGC8 479 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 TMTC1Q8IUR5 882 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 EHBP1Q8NDI1 1231 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 CTCFLQ8NI51 663 aaPredicted RBP6.98□□□□□ -1.29
HERC4-209ENST00000473533 RPGRIP1Q96KN7 1286 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 MAP3K14Q99558 947 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 MKRN1Q9UHC7 482 aaKnown RBP6.98□□□□□ -1.29
HERC4-209ENST00000473533 CDC23Q9UJX2 597 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 NFE2L3Q9Y4A8 694 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 PCDHA5Q9Y5H7 936 aa6.98□□□□□ -1.29
HERC4-209ENST00000473533 MROH7-TTC4A0A0A0MT08 1334 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 WDHD1O75717 1129 aaPredicted RBP6.97□□□□□ -1.29
HERC4-209ENST00000473533 PCCAP05165 728 aaPredicted RBP6.97□□□□□ -1.29
HERC4-209ENST00000473533 ATP1A3P13637 1013 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 PTPREP23469 700 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 MORC3Q14149 939 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 TMEM67Q5HYA8 995 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 SPATA1Q5VX52 437 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 IQUBQ8NA54 791 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 MED4Q9NPJ6 270 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 NDUFB9Q9Y6M9 179 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 KIF28PB7ZC32 967 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 APPP05067 770 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 ZNF18P17022 549 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 GTF2E1P29083 439 aaPredicted RBP6.97□□□□□ -1.29
HERC4-209ENST00000473533 ADD2P35612 726 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 USP5P45974 858 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 HAND2P61296 217 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 TTLL5Q6EMB2 1281 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 IQCEQ6IPM2 695 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 CCDC70Q6NSX1 233 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 METTL16Q86W50 562 aaKnown RBP6.97□□□□□ -1.29
HERC4-209ENST00000473533 CCDC148Q8NFR7 591 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 FERMT2Q96AC1 680 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 MAN1B1Q9UKM7 699 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 RTL9Q8NET4 1388 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 CDHR2Q9BYE9 1310 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 ALS2Q96Q42 1657 aa6.97□□□□□ -1.29
HERC4-209ENST00000473533 A0A1B0GTH6 734 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms